ALBERT

Description: Background: Sponges (phylum Porifera) constantly interact with microbes. They graze on microbes from the water column by filter-feeding and they harbor symbiotic partners within their bodies. In experimental setups, sponges take up symbionts at lower rates compared with seawater microbes. This suggests that sponges have the capacity to differentiate between microbes and preferentially graze in non-symbiotic microbes, although the underlying mechanisms of discrimination are still poorly understood. Genomic studies showed that, compared to other animal groups, sponges present an extended repertoire of immune receptors, in particular NLRs, SRCRs, and GPCRs, and a handful of experiments showed that sponges regulate the expression of these receptors upon encounter with microbial elicitors. We hypothesize that sponges may rely on differential expression of their diverse repertoire of poriferan immune receptors to sense different microbial consortia while filter-feeding. To test this, we characterized the transcriptomic response of two sponge species, Aplysina aerophoba and Dysidea avara, upon incubation with microbial consortia extracted from A. aerophoba in comparison with incubation with seawater microbes. The sponges were sampled after 1 h, 3 h, and 5 h for RNA-Seq differential gene expression analysis. Results: D. avara incubated with A. aerophoba-symbionts regulated the expression of genes related to immunity, ubiquitination, and signaling. Within the set of differentially-expressed immune genes we identified different families of Nucleotide Oligomerization Domain (NOD)-Like Receptors (NLRs). These results represent the first experimental evidence that different types of NLRs are involved in microbial discrimination in a sponge. In contrast, the transcriptomic response of A. aerophoba to its own symbionts involved comparatively fewer genes and lacked genes encoding for immune receptors. Conclusion: Our work suggests that: (i) the transcriptomic response of sponges upon microbial exposure may imply “fine-tuning” of baseline gene expression as a result of their interaction with microbes, (ii) the differential response of sponges to microbial encounters varied between the species, probably due to species-specific characteristics or related to host’s traits, and (iii) immune receptors belonging to different families of NLR-like genes played a role in the differential response to microbes, whether symbionts or food bacteria. The regulation of these receptors in sponges provides further evidence of the potential role of NLRs in invertebrate host-microbe interactions. The study of sponge responses to microbes exemplifies how investigating different animal groups broadens our knowledge of the evolution of immune specificity and symbiosis.

Description: We report two Arctic species of incirrate octopods new to science. One is formally described here as Muusoctopus aegir Golikov, Gudmundsson & Sabirov sp. nov. while the other, Muusoctopus sp. 1, is not formally described due to a limited number of samples (all are immature individuals). These two species differ from each other, and from other Muusoctopus, especially in: 1) absence of stylets (in M. aegir sp. nov.); 2) proportions of mantle and head; 3) funnel organ morphology (W-shaped with medial and marginal limbs of equal length in M. aegir sp. nov., or medial are slightly longer; V V-shaped with medial limbs slightly longer and broader than marginal in Muusoctopus sp. 1); 4) sucker and gill lamellae counts; 5) relative arm length and sucker diameter; and 6) male reproductive system relative size and morphology. Species of Muusoctopus now comprise four of 12 known Arctic cephalopods. Additionally, this study provides: a) new data on the morphology and reproductive biology of M. johnsonianus and M. sibiricus, and a diagnosis of M. sibiricus; b) the equations to estimate mantle length and body mass from beak measurements of M. aegir sp. nov. and M. johnsonianus; c) a cytochrome c oxidase subunit I gene barcode for M. sibiricus; d) new data on the ecology and distribution of all studied species; and e) a data table for the identification of northern North Atlantic and Arctic species of Muusoctopus.

Description: Published

Description: OS: Terza missione

Description: Anthropogenic disturbances are having strong, negative effects on aquatic systems globally, altering ecological communities and potentially creating vacant niches for both native and non-native species (NNS). Globalization and new trade routes have amplified the spread and establishment of NNS by connecting disturbed areas worldwide. In this study, we conducted a comparative assessment of seasonal variations in amphipod communities at three southeastern Baltic Sea locations – two anthropogenically impacted and one protected habitat – to determine if native and NNS diversity differed among these habitats. Our study revealed nine amphipod species - of which two were NNS - across all three habitats. The impacted habitats had significantly higher native species richness and lower NNS abundance. Grandidierella japonica was the only NNS found at the impacted habitas. In the case of the protected habitat, NNS Gammarus tigrinus was dominant for most of the year. In autumn, dominance shifted in favour of the native Gammarus locusta and Microdeutopus cf. gryllotalpa. Grandidierella japonica was not detected there. Although anthropogenically impacted habitats may be under higher invasion risk, other environmental factors, such as salinity and temperature, may be driving the establishment pattern of NNS and the resulting community structures. Furthermore, undisturbed and/or protected habitats may be highly vulnerable to invasions due to more tolerable environmental conditions, robust NNS populations and naïve native species to newcomers. Seasonality is an important aspect of ecological studies and must be taken into account, as omissions could potentially distort our understanding of the dynamics of ecosystems and prevent the detection of NNS.

Description: Highlights • All investigated sites are in quiescent stage. Multi layers of clam shell debris were the ancient sediment surfaces during high methane flux. • Current fluxes contribute to less than 2 wt % of authigenic carbonates and 2 wt % iron sulfide minerals being precipitated in 600-800 cm sediment. • The sequestration of carbon could be 〉 50 mmol C cm-2 yr-1 under current in situ condition. Abstract Methane seepage records information of the local carbon cycle with respect to the generation, consumption and sequestration of carbon. Here presents the investigation of 7 gravity cores retrieved in 2004 during cruise SO-177 in the Haiyang 4 Area at the northern slope of the South China Sea. Porewater solutes, sulfate, methane, total alkalinity, sulfide and calcium demonstrate currently the weak seep activity. Local carbon cycling and sequestration is also revealed, that dominates by anaerobic oxidation of biogenic methane to dissolved bicarbonate inducing calcium carbonate and iron sulfide minerals (mainly pyrite) precipitation. A reactive transport model was employed to quantify the carbon cycle and budget. Model results show that current methane fluxes contribute to less than 2 wt % of authigenic carbonates and 2 wt % iron sulfide minerals being precipitated in 600–800 cm sediment depth. The sequestration of carbon could be 〉 50 mmol C cm−2 yr−1 under in situ condition. The observed increase of carbonate and iron sulfide minerals at ∼100 cm, however, require higher methane fluxes to shift the zone of anaerobic oxidation of methane upwards to around 1 m below the seafloor, which have occurred during sea level low stands in the geological past. The oscillation of seepage flux contributed to the formation of multiple layers of authigenic carbonates and pyrite, which indicates the high capability of carbon sink and is speculated to be induced by the dissociation of the underlying hydrates triggered by sea level drop and or temperature increase.

Description: Background: Assessing the historical dynamics of key food web components is crucial to understand how climate change impacts the structure of Arctic marine ecosystems. Most retrospective stable isotopic studies to date assessed potential ecosystem shifts in the Arctic using vertebrate top predators and filter-feeding invertebrates as proxies. However, due to long life histories and specific ecologies, ecosystem shifts are not always detectable when using these taxa. Moreover, there are currently no retrospective stable isotopic studies on various other ecological and taxonomic groups of Arctic biota. To test whether climate-driven shifts in marine ecosystems are reflected in the ecology of short-living mesopredators, ontogenetic changes in stable isotope signatures in chitinous hard body structures were analysed in two abundant squids (Gonatus fabricii and Todarodes sagittatus) from the low latitude Arctic and adjacent waters, collected between 1844 and 2023. Results: We detected a temporal increase in diet and habitat-use generalism (= opportunistic choice rather than specialization), trophic position and niche width in G. fabricii from the low latitude Arctic waters. These shifts in trophic ecology matched with the Atlantification of the Arctic ecosystems, which includes increased generalization of food webs and higher primary production, and the influx of boreal species from the North Atlantic as a result of climate change. The Atlantification is especially marked since the late 1990s/early 2000s. The temporal patterns we found in G. fabricii’s trophic ecology were largely unreported in previous Arctic retrospective isotopic ecology studies. Accordingly, T. sagittatus that occur nowadays in the high latitude North Atlantic have a more generalist diet than in the XIXth century. :Conclusions Our results suggest that abundant opportunistic mesopredators with short life cycles (such as squids) are good candidates for retrospective ecology studies in the marine ecosystems, and to identify ecosystem shifts driven by climate change. Enhanced generalization of Arctic food webs is reflected in increased diet generalism and niche width in squids, while increased abundance of boreal piscivorous fishes is reflected in squids’ increased trophic position. These findings support opportunism and adaptability in squids, which renders them as potential winners of short-term shifts in Arctic ecosystems.

Description: In addition to endangering sea traffic, cable routes, and wind farms, sunken warship wrecks with dangerous cargo, fuel, or munitions on board may emerge as point sources for environmental damage. Energetic compounds such as TNT (which could leak from these munitions) are known for their toxicity, mutagenicity, and carcinogenicity. These compounds may cause potential adverse effects on marine life via contamination of the marine ecosystem, and their entry into the marine and human food chain could directly affect human health. To ascertain the impending danger of an environmental catastrophe posed by sunken warships, the North Sea Wrecks (NSW) project (funded by the Interreg North Sea Region Program) was launched in 2018. Based on historical data (derived from military archives) including the calculated amount of munitions still on board, its known location and accessibility, the German World War II ship “Vorpostenboot 1302” (former civilian name - “JOHN MAHN”) was selected as a case study to investigate the leakage and distribution of toxic explosives in the marine environment. The wreck site and surrounding areas were mapped in great detail by scientific divers and a multibeam echosounder. Water and sediment samples were taken in a cross-shaped pattern around the wreck. To assess a possible entry into the marine food chain, aged mussels were exposed at the wreck, and wild fish (pouting), a sedentary species that stays locally at the wreck, were caught. All samples were analyzed for the presence of TNT and derivatives thereof by GC–MS/MS analysis. As a result, we could provide evidence that sunken warship wrecks emerge as a point source of contamination with nitroaromatic energetic compounds leaking from corroding munitions cargo still on board. Not only did we find these explosive substances in bottom water and sediment samples around the wreck, but also in the caged mussels as well as in wild fish living at the wreck. Fortunately so far, the concentrations found in mussel meat and fish filet were only in the one-digit ng per gram range thus indicating no current concern for the human seafood consumer. However, in the future the situation mayworsen as the corrosion continues. Fromour study, it is proposed that wrecks should not only be ranked according to critical infrastructure and human activities at sea, but also to the threats they pose to the environment and the human seafood consumer.

Description: The present work intended to investigate the fate of contaminant-loaded microplastics if ingested by benthic filter feeder Mytilus edulis under laboratory conditions. In the course of a 7-day experiment the mussels were exposed to PVC microplastics in a size range 〉40 mm, in doses of 2000 particles L_1 (11.56 mg L_1). Particles were either virgin or loaded with one of four different nominal concentrations of the polycyclic aromatic hydrocarbon (PAH) fluoranthene (500, 125, 31.25 and 7.8125 mg g_1). Verification of fluoranthene concentrations on the particles provided evidence of the high absorptive capacity of PVC for this PAH, indicating that comparable particles may serve as considerable accumulation sites for high concentrations of hydrophobic contaminants in the aquatic environment. Analysis of digestive gland tissues via polarised light microscopy revealed the occurrence of particles and particle aggregates within stomach and intestines of all mussels treated with microplastics, thus making the xenobiotic bioavailable. Results of contaminant analysis in mussel tissues via equilibrium sampling point to a considerable capability of microplastics for the accumulation of hydrophobic contaminants from the environment and their potential to act as vehicles for the transport of theses contaminants into organismal tissues. of fluoranthene concentrations on the particles provided evidence of the high absorptive capacity of PVC for this PAH, indicating that comparable particles may serve as considerable accumulation sites for high concentrations of hydrophobic contaminants in the aquatic environment. Analysis of digestive gland tissues via polarised light microscopy revealed the occurrence of particles and particle aggregates within stomach and intestines of all mussels treated with microplastics, thus making the xenobiotic bioavailable. Results of contaminant analysis in mussel tissues via equilibrium sampling point to a considerable capability of microplastics for the accumulation of hydrophobic contaminants from the environment and their potential to act as vehicles for the transport of theses contaminants into organismal tissues. © 2021 The Authors. Published by Elsevier Ltd. This is an open access article under the CC BY license

Description: Automatic seismic data interpretation is a significant method in the exploration of geophysics. Complexities of the subsurface structures and the subsurface wave propagation media, make the decision-making process difficult in seismic data interpretation. Nevertheless, the extent of related knowledge and using the expert system method in seismic data interpretation can mitigate this problem. An expert system is a knowledge-based system that applies its knowledge in a complex and specific area and acts as an expert end-user consultant. This study investigates the design of an ANFIS expert system for mud diapirs detection with seismic data analysis in Gorgan plain. This method was applied to seismic attributes from a complex geological mud diapir bearing structure from south of the Caspian Sea. The south of the Caspian Sea is one of the richest area as petroleum reserves, and the Gorgan plain has various mud diapirs, which act as indicators of hydrocarbon reservoirs. The expert system design process to identify mud diapirs on seismic sections was modeled in two approaches including manual and automatic seismic data interpretation. In the first approach, the experience of the expert was collected by manual interpretation of training data and used to create a knowledge base and inference of the expert system in the second approach. The validation verified the accuracy of this method with an average accuracy of 90.1% according to using minimum knowledge to develop a knowledge base of the designed ANFIS expert system.