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  • Wiley  (110,009)
  • American Institute of Physics  (79,595)
  • Blackwell Publishing Ltd
  • 2020-2023  (110)
  • 2005-2009  (191,738)
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  • 1
    Publication Date: 2024-01-07
    Description: Drift is a prominent parameter characterizing the Arctic sea ice cover that has a deep impact on the climate system. Hence it is a key issue to both the remote sensing as well as the modeling community, to provide reliable sea ice drift fields. This study focuses on the comparison of sea ice drift results from different sea ice‐ocean coupled models and the validation with observational data in the period 1979–2001. The models all take part in the Arctic Ocean Model Intercomparison Project (AOMIP) and the observations are mainly based on satellite imagery. According to speed distributions, one class of models has a mode at drift speeds around 3 cm s −1 and a short tail toward higher speeds. Another class shows a more even frequency distribution with large probability of drift speeds of 10 to 20 cm s −1 . Observations clearly agree better with the first class of model results. Reasons for these differences are manifold and lie in discrepancies of wind stress forcing as well as sea ice model characteristics and sea ice‐ocean coupling. Moreover, we investigated the drift patterns of anticyclonic and cyclonic wind‐driven regimes. The models are capable of producing realistic drift pattern variability. The winter of 1994/1995 stands out because of its maximum in Fram Strait ice export. Although export estimates of some models agree with observations, the corresponding inner Arctic drift pattern is not reproduced. The reason for this is found in the wind‐forcing as well as in differences in ocean velocities.
    Type: Article , PeerReviewed
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  • 2
    Publication Date: 2023-11-17
    Description: Structure and growth of the Izu‐Bonin‐Mariana arc crust: 1. Seismic constraint on crust and mantle structure of the Mariana arc–back‐arc system Narumi Takahashi Institute for Research on Earth Evolution Japan Agency for Marine‐Earth Science and Technology Kanagawa Japan Shuichi Kodaira Institute for Research on Earth Evolution Japan Agency for Marine‐Earth Science and Technology Kanagawa Japan Yoshiyuki Tatsumi Institute for Research on Earth Evolution Japan Agency for Marine‐Earth Science and Technology Kanagawa Japan Yoshiyuki Kaneda Institute for Research on Earth Evolution Japan Agency for Marine‐Earth Science and Technology Kanagawa Japan Kiyoshi Suyehiro Institute for Research on Earth Evolution Japan Agency for Marine‐Earth Science and Technology Kanagawa Japan A high‐resolution seismic velocity model is presented for the crust and upper mantle of the Mariana arc–back‐arc system (MABS) based on active source seismic profiling. The major characteristics are (1) slow mantle velocity of 〈8 km s −1 in the uppermost mantle, especially, and deep reflectors under the Mariana arc (MA) and the West Mariana Ridge (WMR), (2) a deep reflector in the upper mantle beneath the relative thick crust of the Mariana Trough (MT) axis, (3) distribution of lower‐velocity lower crusts (6.7–6.9 km s −1 ) beneath the volcanic front and adjacent to the MT, and (4) high‐velocity lower crust (7.2–7.4 km s −1 ) beneath the boundary regions between the MA and MT, and between the WMR and the Parece Vela Basin (PVB), adding to structural characteristics of crust and upper mantle beneath the MABS. Of the characteristics described above, characteristic 1 suggests that the origins of the slow mantle velocity and the deep reflectors be explained by transfer of the lower crustal residues to the upper mantle across the Moho, considering that the WMR is extinct arc currently. On the other hand, characteristic 2 suggests that the origin of deep reflectors beneath the MT axis might be lower velocity materials due to the diffractive signals with strong amplitudes, characteristic 3 suggests that the lower‐velocity lower crust advanced crustal growth and characteristic 4 suggests that the high‐velocity lower crust beneath arc–back‐arc transition zone is composed of mafic/ultramafic materials created by extensive partial melting of mantle peridotites or last stage of the arc magmatism rather than serpentinized peridotite.
    Type: Article , PeerReviewed
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  • 3
    Publication Date: 2023-11-08
    Description: On the Pacific margin off central Costa Rica, an anomalous lens-shaped zone is located between the overriding plate and the subducting oceanic lithosphere approximately 25 km landward of the deformation front. This feature was previously recognized in reflection seismic data when it was termed 'megalens'. Its origin and seismic velocity structure, however, could not unambiguously be derived from earlier studies. Therefore during RV SONNE cruise SO163, seismic wide-angle data were acquired in 2002 using closely spaced ocean bottom hydrophones and seismometers along two parallel strike and two parallel dip lines above the 'megalens', intersecting on the middle slope. The P-wave velocities and structure of the subducting oceanic Cocos Plate and overriding Caribbean Plate were determined by modelling the wide-angle seismic data in combination with the analysis of coincident reflection seismic data and the use of synthetic seismograms. The margin wedge is defined by high seismic velocities (4.3-6.1 km s(-1)) identified within a wedge-shaped body covered by a slope sediment drape. It is divided into two layers with different velocity gradients. The lower margin wedge is clearly constrained by decreasing velocities trenchward and terminates beneath the middle slope at the location of the 'megalens'. Seismic velocities of the 'megalens' are lower (3.8-4.3 km s(-1)) relative to the margin wedge. We propose that the 'megalens' represents hybrid material composed of subducted sediment and eroded fragments from the base of the upper plate. Upward-migrating overpressured fluids weaken the base of the margin wedge through hydrofracturing, thus causing material transfer from the upper plate to the lower plate. Results from amplitude modelling support that the 'megalens' observed off central Costa Rica is bound by a low-velocity zone documenting fluid drainage from the plate boundary to the upper plate.
    Type: Article , PeerReviewed
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  • 4
    Publication Date: 2023-03-22
    Description: Lilliput was discovered in 2005 as the southernmost known hydrothermal field along the Mid-Atlantic Ridge. It is exceptional in that it lacks high-temperature venting probably because of a thickened crust. The absence of thermophilic and hyperthermophilic prokaryotes in emissions supports the argument against the presence of a hot subsurface at Lilliput, as is typically suggested for diffuse emissions from areas of high-temperature venting. The high phylogenetic diversity and novelty of bacteria observed could be because of the low-temperature influence, the distinct location of the hydrothermal field or the Bathymodiolus assemblages covering the sites of discharge. The low-temperature fluids at the Lilliput are characterized by lowered pH and slightly elevated hydrogen (16 nM) and methane (∼2.6 μM) contents compared with ambient seawater. No typical hydrogen and methane oxidizing prokaryotes were detected. The higher diversity of reverse tricarboxylic acid genes and the form II RubisCO genes of the Calvin Benson-Bassham (CBB) cycle compared with the form I RubisCO genes of the CBB cycle suggests that the chemoautotrophic community is better adapted to low oxygen concentrations. Thiomicrospira spp. and Epsilonproteobacteria dominated the autotrophic community. Sulfide is the most abundant inorganic energy source (0.5 mM). Diverse bacteria were associated with sulfur cycling, including Gamma-, Delta- and Epsilonproteobacteria, with the latter being the most abundant bacteria according to fluorescence in situ hybridization. With members of various Candidate Divisions constituting for 25% of clone library sequences we suggest that their role in vent ecosystems might be more important than previously assumed and propose potential mechanisms they might be involved in at the Lilliput hydrothermal field.
    Type: Article , PeerReviewed
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  • 5
    Publication Date: 2022-12-19
    Description: New sedimentological data of facies and diagenesis as well as chronological data including strontium (87Sr/86Sr)-isotope ratios and uranium (U)-series dating, radiocarbon (14C) accelerator mass spectrometry (AMS) dating and biostratigraphy from elevated reef terraces (makatea) in the southern Cook Islands of Mangaia, Rarotonga and Aitutaki contribute to controversial discussions regarding age and sea-level relationships of these occurrences during the Neogene and Quaternary. The oldest limestones of the uplifted makatea island of Mangaia include reef-related facies which are mid-Miocene in age, based on new Sr-isotope and biostratigraphical data. In between these older deposits and the lowest coastal reef terrace of marine isotope stage (MIS) 5e, various older Pleistocene reef-related facies were identified. Based on Sr-isotope ratios, these were deposited during earlier Pleistocene highstands (as old as 2.28 Ma). Rare reef terraces on Rarotonga belong to the Plio-Pleistocene and the late Miocene, according to 87Sr/86Sr ratios. The late Miocene age is enigmatic as it exceeds the age of subaerially exposed volcanic rocks of Rarotonga island. The fossil reef could have formed on an older submarine volcanic high that was later displaced by younger volcanism to its present position, or the Sr-age could be too old due to diagenetic resetting. The Plio-Pleistocene Rarotonga reef terraces are overlain irregularly by Holocene reef deposits that are interpreted as storm rubble. Reef terraces on Aitutaki represent evidence of a higher-than-present (up to 1 m) sea-level during the late Holocene, based on 14C AMS age data. They are very similar to elevated late Holocene reefs of adjacent French Polynesia with regard to composition, elevation and age.
    Type: Book chapter , NonPeerReviewed
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  • 6
    Publication Date: 2022-12-12
    Description: Author Posting. © The Author(s), 2022. This is the author's version of the work. It is posted here by permission of John Wiley & Sons for personal use, not for redistribution. The definitive version was published in . Journal of Phycology (2022), https://doi.org/10.1111/jpy.13230.
    Description: The marine green alga Brilliantia kiribatiensis gen. et sp. nov. is described from samples collected from the coral reefs of the Southern Line Islands, Republic of Kiribati, Pacific Ocean. Phylogenetic analysis of sequences of the large- and small-subunit rDNA and the rDNA internal transcribed spacer region revealed that Brilliantia is a member of the Boodleaceae (Cladophorales), containing the genera Apjohnia, Boodlea, Cladophoropsis, Chamaedoris, Phyllodictyon, and Struvea. Within this clade it formed a distinct lineage, sister to Struvea elegans, but more distantly related to the bona fide Struvea species (including the type S. plumosa). Brilliantia differs from the other genera by having a very simple architecture forming upright, unbranched, single-celled filaments attached to the substratum by a rhizoidal mat. Cell division occurs by segregative cell division only at the onset of reproduction. Based on current sample collection, B. kiribatiensis seems to be largely restricted to the Southern Line Islands, although it was also observed on neighboring islands, including Orona Atoll in the Phoenix Islands of Kiribati, and the Rangiroa and Takapoto Atolls in the Tuamotus of French Polynesia. This discovery highlights the likeliness that there is still much biodiversity yet to be discovered from these remote and pristine reefs of the central Pacific.
    Description: National Geographic Society
    Description: 2022-12-12
    Keywords: 18S nuclear ribosomal DNA ; Chlorophyta ; Cladophorales ; Molecular phylogeny ; Siphonocladales ; Ulvophyceae
    Repository Name: Woods Hole Open Access Server
    Type: Preprint
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  • 7
    Publication Date: 2022-11-07
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Kourantidou, M., & Jin, D. Mesopelagic-epipelagic fish nexus in viability and feasibility of commercial-scale mesopelagic fisheries. Natural Resource Modeling, 35(4), (2022): e12350, https://doi.org/10.1111/nrm.12350.
    Description: While considerable scientific uncertainties persist for mesopelagic ecosystems, the fishing industry has developed a great interest in commercial exploitation with improved technologies as part of their search for new sources of feed for fishmeal and fish oil for aquaculture, which will intensify with the planet's growing population. The multiple uncertainties surrounding the ecosystem structure and particularly the size of biomass, hinder a good understanding of the risks associated with large-scale exploitation, which is needed for a management framework for sustainable ocean uses. Despite concerns regarding irreversible losses triggered by commercial fishing, work exploring the vulnerability of mesopelagic fish to harvesting is largely missing. This study investigates the economic feasibility of mesopelagic fishing which is the primary driver for any possible future expansion. Using very limited information currently available, we conduct a high-level assessment focusing on key ecological and economic interactions and develop an initial understanding of the economic feasibility of commercial harvesting for mesopelagic fish in the coming years. We conduct simulations using a classical bioeconomic model that captures two species groups, mesopelagic and epipelagic fish, using a wide range of price and cost parameters. We analyze different scenarios for the economic profitability of the fishery in a regional fishery management context. The results of our study highlight the importance of better understanding key biological and ecological mechanisms and parameters which can in turn help inform policies aimed at protecting the mesopelagic.
    Description: This study is supported by WHOI's Ocean Twilight Zone program which is part of the Audacious Project, a collaborative endeavor, housed at TED.
    Keywords: Bioeconomic analysis ; Commercial fisheries ; Ecological interactions ; Economic feasibility ; Mesopelagic fish ; Twilight zone
    Repository Name: Woods Hole Open Access Server
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  • 8
    Publication Date: 2022-10-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Kuehn, E., Clausen, D. S., Null, R. W., Metzger, B. M., Willis, A. D., & Ozpolat, B. D. Segment number threshold determines juvenile onset of germline cluster expansion in Platynereis dumerilii. Journal of Experimental Zoology Part B: Molecular and Developmental Evolution, (2021.): 1-16, https://doi.org/10.1002/jez.b.23100.
    Description: Development of sexual characters and generation of gametes are tightly coupled with growth. Platynereis dumerilii is a marine annelid that has been used to study germline development and gametogenesis. P. dumerilii has germ cell clusters found across the body in the juvenile worms, and the clusters eventually form the gametes. Like other segmented worms, P. dumerilii grows by adding new segments at its posterior end. The number of segments reflect the growth state of the worms and therefore is a useful and measurable growth state metric to study the growth-reproduction crosstalk. To understand how growth correlates with progression of gametogenesis, we investigated germline development across several developmental stages. We discovered a distinct transition period when worms increase the number of germline clusters at a particular segment number threshold. Additionally, we found that keeping worms short in segment number, by manipulating environmental conditions or via amputations, supported a segment number threshold requirement for germline development. Finally, we asked if these clusters in P. dumerilii play a role in regeneration (as similar free-roaming cells are observed in Hydra and planarian regeneration) and found that the clusters were not required for regeneration in P. dumerilii, suggesting a strictly germline nature. Overall, these molecular analyses suggest a previously unidentified developmental transition dependent on the growth state of juvenile P. dumerilii leading to substantially increased germline expansion.
    Description: Research reported in this publication was supported by the National Institute of General Medical Sciences of the National Institutes of Health under Award Number R35GM138008 (to BDÖ) and R35GM133420 (to ADW) and Hibbitt Startup Funds (to BDÖ).
    Keywords: Annelida ; Critical size ; Developmental transition ; Gametogenesis ; Sexual reproduction
    Repository Name: Woods Hole Open Access Server
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  • 9
    Publication Date: 2022-10-27
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Ritschard, E. A., Whitelaw, B., Albertin, C. B., Cooke, I. R., Strugnell, J. M., & Simakov, O. Coupled genomic evolutionary histories as signatures of organismal innovations in cephalopods: co-evolutionary signatures across levels of genome organization may shed light on functional linkage and origin of cephalopod novelties. BioEssays, 41, (2019): 1900073, doi: 10.1002/bies.201900073.
    Description: How genomic innovation translates into organismal organization remains largely unanswered. Possessing the largest invertebrate nervous system, in conjunction with many species‐specific organs, coleoid cephalopods (octopuses, squids, cuttlefishes) provide exciting model systems to investigate how organismal novelties evolve. However, dissecting these processes requires novel approaches that enable deeper interrogation of genome evolution. Here, the existence of specific sets of genomic co‐evolutionary signatures between expanded gene families, genome reorganization, and novel genes is posited. It is reasoned that their co‐evolution has contributed to the complex organization of cephalopod nervous systems and the emergence of ecologically unique organs. In the course of reviewing this field, how the first cephalopod genomic studies have begun to shed light on the molecular underpinnings of morphological novelty is illustrated and their impact on directing future research is described. It is argued that the application and evolutionary profiling of evolutionary signatures from these studies will help identify and dissect the organismal principles of cephalopod innovations. By providing specific examples, the implications of this approach both within and beyond cephalopod biology are discussed.
    Description: E.A.R. and O.S. are supported by the Austrian Science Fund (Grant No. P30686‐B29). E.A.R. is supported by Stazione Zoologica Anton Dohrn (Naples, Italy) PhD Program. The authors wish to thank Graziano Fiorito (SZN, Italy), Hannah Schmidbaur (University of Vienna, Austria), Thomas Hummel (University of Vienna, Austria) for many insightful comments and reading of the draft manuscript. The authors would like to apologize to all colleagues whose work has been omitted due to space constraints.
    Keywords: Cephalopod ; Gene duplication ; Genome rearrangement ; Novel gene ; Organismal innovation
    Repository Name: Woods Hole Open Access Server
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  • 10
    Publication Date: 2022-10-27
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Arenas Gómez, Claudia M., Sabin, K. Z., & Echeverri, K. Wound healing across the animal kingdom: Crosstalk between the immune system and the extracellular matrix. Developmental Dynamics, (2020): 1-13, doi:10.1002/dvdy.178.
    Description: Tissue regeneration is widespread in the animal kingdom. To date, key roles for different molecular and cellular programs in regeneration have been described, but the ultimate blueprint for this talent remains elusive. In animals capable of tissue regeneration, one of the most crucial stages is wound healing, whose main goal is to close the wound and prevent infection. In this stage, it is necessary to avoid scar formation to facilitate the activation of the immune system and remodeling of the extracellular matrix, key factors in promoting tissue regeneration. In this review, we will discuss the current state of knowledge regarding the role of the immune system and the interplay with the extracellular matrix to trigger a regenerative response.
    Description: The research in the Echeverri lab is supported NIH NCID R01 to Karen Echeverri and start‐up funds from the MBL. Keith Z. Sabin has been supported by an NIH T32 GM113846 grant.
    Keywords: Extracellular matrix ; Immune system ; Regeneration ; Wound healing
    Repository Name: Woods Hole Open Access Server
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