ALBERT

Description: Publication date: Available online 1 August 2015 Source: Dendrochronologia Author(s): Katarina Čufar, Willy Tegel, Maks Merela, Bernd Kromer, Anton Velušček We present dendrochronological dating of Eneolithic pile dwellings on Ljubljansko barje, Slovenia, from the 4th millennium BC, partly included on the UNESCO world heritage list in 2011. Samples of oak ( Quercus sp.) timbers from the posts on which the dwellings were built have been collected over the past 20 years. They have been dendrochronologically cross-dated and (pre) dated by 14 C wiggle-matching. We describe the construction of a 442-year chronology BAR-3330 based on 106 cross-dated tree-ring series of wood from six pile-dwelling sites. Comparison of BAR-3330 with reference chronologies of more than 500 km distant areas north of the Alps showed that it can be teleconnected and dated with a combined German Swiss chronology. The time span of BAR-3330 was defined in this way as 3771–3330 BC. We were thus able to date exactly building activities on the pile dwellings Strojanova voda (SV), Hočevarica (HO), Maharski prekop (MP), Črešnja pri Bistri (CR), Spodnje mostišče (SM) and Stare gmajne (SG), in which early copper metallurgy played an important role. This is the first dendrochronological dating of prehistoric pile dwellings south of the Alps using reference chronologies from the north based on teleconnection. It provides an opportunity to continue filling the spatial and temporal gaps in the absolute chronology of the 4th millennium BC in the area south and south east of the Alps. Graphical abstract

Description: Publication date: Available online 3 August 2015 Source: SoftwareX Author(s): Gianmarco Alberti Correspondence Analysis (CA) is a statistical exploratory technique frequently used in many research fields to graphically visualize the structure of contingency tables. Many programs, both commercial and free, perform CA but none of them as yet provides a visual aid to the interpretation of the results. The ‘CAinterprTools’ package, designed to be used in the free R statistical environment, aims at filling that gap. A novel-to-medium R user has been considered as target. 15 commands enable to easily obtain charts that help (and are relevant to) the interpretation of the CA’s results, freeing the user from the need to inspect and scrutinize tabular CA outputs, and to look up values and statistics on which further calculations are necessary. The package also implements tests to assess the significance of the input table’s total inertia and individual dimensions.

Description: Publication date: Available online 9 September 2015 Source: Dendrochronologia Author(s): Stefan Krottenthaler, Philipp Pitsch, Gerd Helle, Giuliano Maselli Locosselli, Gregório Ceccantini, Jan Altman, Miroslav Svoboda, Jiri Dolezal, Gerhard Schleser, Dieter Anhuf High-density hardwood trees with large diameters have been found to damage manually operated increment borers, thus limiting their use in the tropics. Therefore, we herein report a new, low-cost gasoline-powered sampling system for high-density tropical hardwood trees with large diameters. This system provides increment cores 15 mm in diameter and up to 1.35 m in length, allowing minimally invasive sampling of tropical hardwood tree species, which, up to the present, could not be collected by conventional 5 or 10 mm increment borers. This system provides a single core sample with ample amount of wood for multidisciplinary analyses, including ring width, stable isotope and wood anatomical measurements. The borer never gets stuck inside stems, even in hollowed trees, cores will never twist during coring, and the gasoline drill gives ample flexibility in the field. It is anticipated that the dendrochronological community will find our technique very useful in the pursuit of tropical tree ring research.

Description: Publication date: April–June 2015 Source: Geofísica Internacional, Volume 54, Issue 2 Author(s): Hugo G. Nami Paleomagnetic data from three sedimentary sections in Pichincha province -Quito City (QC), Mullimica (Mu) and El Tingo (ET)- Ecuador (northwestern South America) are reported. Analysis of natural remanent magnetization directions obtained from 109 oriented samples taken at 4 sites, shows that some samples recorded a magnetic component different from the normal present geomagnetic field (GMF). The characteristic remanent magnetization (ChRM) was determined by progressive AF demagnetization. The analysis shows that the sections recorded ChRM of normal, intermediate and reverse polarities during the Pleistocene-Holocene transition and Holocene. Normal directions were recorded in QC, while normal and intermediate polarity directions at Mu and, reverse VGPs at ET. QC and the upper portion of Mu correspond to the paleosecular variation Holocene record for Ecuador during the ∼≤4.7 ka BP. On the other hand, the lower portion of Mu logs represents the transition from normal to intermediate directions occurring at ∼≥5.6 ka BP. Sites from ET recorded two stable oblique reverse records with a large fluctuation far from the present GMF at ∼10.5 ka BP. The transitional virtual geomagnetic poles generally agree with those registered during the possible Pleistocene-Holocene excursion observed in other places of the planet. When plotted in a present world map, VGPs calculated from normal samples at QC are very well clustered in Northern North America, Greenland and Northern Europe; most VGP's calculated from Mu are situated between 30° and 60° northern latitude in Northern North America, Greenland, western Europe, Africa and North Pacific Ocean. Interestingly, the majority of the reverse directions from ET conforms a patch located in southern Africa, and a few ones are situated in central Africa, eastern Australia and Antarctica. An Ecuadorian paleopole was calculated with data resulting from QC and Mu. Also other paleopoles of the same age were processed from other North and South American sites. Remarkably they agree well, although they do not agree with the geographical pole showing ∼15 o angular difference in relation to the rotation's axis of the Earth. Finally, is discussed the hypothesis of the global excursional state of the GMF during the last ∼11.0 ka BP and the potential use as dating tool the excursion dated at 10.5 ka BP.

Description: Publication date: April–June 2015 Source: Geofísica Internacional, Volume 54, Issue 2 Author(s): Miguel Cervantes Solano , Avto Goguitchaichvili , Mabel Mena , Luis Alva-Valdivia , Juan Morales Contreras , Ruben Cejudo Ruiz , Héctor López Loera , Ana María Soler , Jaime Urrutia-Fucugauchi A detailed paleomagnetic and rock magnetic investigation has been carried out on the Early Cretaceous Ponta Grossa dike swarm in southern Brazil. This formation seems an excellent target for paleomagnetic study. The dikes are widely distributed over a large area, easy to access, and they record faithfully the geomagnetic field at the time of the eruption. Most of them are fresh and have been dated by K-Ar and Ar-Ar. Thermomagnetic experiments (low-field versus temperature curves) suggest low-Ti titanomagnetites as main remanence carriers, and their domain structure is characterised by a mixture of single-domain and multi-domain grains. Characteristic paleomagnetic directions are retrieved from 28 out of 29 sites (235 standard paleomagnetic cores). 17 sites show normal polarity, 10 sites show reverse polarity and one site shows an oblique direction, with negative inclination, separated 79° of the mean normal directions. The reversal test is positive at the 95% confidence level which ensures that the secondary remanent magnetizations were successfully removed and the sampling adequately averaged the palaeosecular variation. The paleosecular variation parameters values obtained in this study correlate with those determined for the Cretaceous Normal Superchron, between 125 to 84 Ma. The new paleomagnetic pole position (222.0° E, 88.1° S, N = 24, K = 35.68, A 95 = 5.0°) agrees well (within uncertainties) with the reference poles determined from Besse and Courtillot (2002) , and disagree with those reported in previous studies. The new results should be considered for estimating the Cretaceous paleomagnetic poles for stable South America.

Description: Publication date: January–March 2015 Source: Geofísica Internacional, Volume 54, Issue 1 Author(s): V. Chakravarthi , M. Pramod Kumar An inversion algorithm is developed to simultaneously estimate the fault plane geometry and the parameters pertaining to either densities or depths of multiple geologic formations within the hanging wall system of a strike-limited listric fault from the observed gravity anomalies. Fault planes of the structures are described by polynomial functions of arbitrary but specific degree. The applicability of the algorithm is demonstrated on both synthetic and real field gravity anomalies. In the synthetic example, pseudorandom noise is added to the gravity anomalies of the structure prior to inversion. From the inversion of gravity anomalies produced by a synthetic structure it was found that the estimated parameters more or less mimic the true parameters even in the presence of random noise. The estimated densities and depths of the formations from independent inversion of real-world gravity anomalies from the margin of the Chintalpudi sub-basin in India correlate well with the available drilling information.

Description: Publication date: January–March 2015 Source: Geofísica Internacional, Volume 54, Issue 1 Author(s): Efraín Ovando Shelley , Vanessa Mussio , Miguel Rodríguez , José G. Acosta Chang In this paper we describe how some techniques for estimating shallow shear wave velocity profilesobtainedfrommeasurementsofambient vibrations and from artificially generated waves can be used to assess sand liquefaction potential. The measurements are easy, quick and more economical than most other methods. The passive Microtremor Analysis Method (MAM) and the active Multichannel Analysis of Surface Waves (MASW) have only recently been adopted for liquefaction studies. We propose a method that was applied in the valley of Mexicali to characterize soil in terms of shear wave velocity to assess liquefaction potential; our results display its advantages.

Description: Publication date: January–March 2015 Source: Geofísica Internacional, Volume 54, Issue 1 Author(s): Akhtar Malik Muhammad , Tang Zhonghua , Ammar Salman Dawood , Bailey Earl Groundwater vulnerability assessment shows an extreme sensitivity to in situ anthropogenic pollutants. A dichotomous assessment of geological and hydrological (inter alia) characteristics makes it possible to determine the vulnerability of an aquifer. The natural carrying capacity of aquifer can be severely compromised by human activities. The physical structure and material composition of aquifers shows resistance to contaminants transport from surface to water-table. Currently, numerous methods have been posited evaluating aquifer's vulnerability. Similarly the DRASTIC model utilizes computer algorithms and hydro-geological data within a Geographical Information System (GIS) environment to compute aquifer vulnerability. The degree of vulnerability for each parameter can be evaluated by computing sensitivity analysis of DRASTIC index using GIS, showing the contribution of each parameter to vulnerability sensitivity. The GIS was used to developed map which showed high risk area of 28.8% and moderately vulnerable areas of 46.3% while areas of no risk were 10.4%. Central regions within the study area showed low vulnerability due to dense human settlement and low water level. However, pasture type lands and agricultural areas recorded high risk. Lahore's environmental and socio-economic development is dependent on policy makers and planner's ability to use information effectively for decision making. The resultant groundwater vulnerability map provides a basis for this aimed at protecting the aquifer from pollutants. Additionally, land use and development activities can be informed by mapping variables, showing that industrial and agriculture areas are highly vulnerable as compare to settlement areas.

Description: Publication date: Available online 24 June 2016 Source: SoftwareX Author(s): Jeffrey Bolan, Elise Hall, Chris Clifford, Brian Thurow The Light-Field Imaging Toolkit (LFIT) is a collection of MATLAB functions designed to facilitate the rapid processing of raw light field images captured by a plenoptic camera. An included graphical user interface streamlines the necessary post-processing steps associated with plenoptic images. The generation of perspective shifted views and computationally refocused images is supported, in both single image and animated formats. LFIT performs necessary calibration, interpolation, and structuring steps to enable future applications of this technology.

Description: Publication date: Available online 10 May 2016 Source: SoftwareX Author(s): Ali H. Taqi Random Phase Approximation (RPA) is one of the main approximation tools in studying nuclear structure. Here, we present a graphical user interface (GUI) Fortran code: Particle–Particle Random Phase Approximation (PPRPA) version 1, 2015. The code performs Tamm–Dancoff approximation (TDA) and Random Phase Approximation (RPA) calculations of nuclear structure of nuclei having A ± 2 nucleons in the total angular momenta and isospin (JT) scheme. The Hamiltonian is diagonalized with a given input model space, single-particle energies and interaction. Space function has been expanded to include orbits s, p, d, f, g and h. The current version of the code allows the user to test 20 orbits only. All possible eigenvalues and amplitudes within a model space are calculated. The single-particle density, charge distribution density and transition density are calculated in the basis of the harmonic oscillator potential. The primary utility of the PPRPA code is providing a visual tool to implementation and understanding of the collective excitation techniques TDA and RPA. Impact of the program includes all students, researchers and all those interested in knowing the facts about the structure of the atom nucleus and about the success of approximation methods in different branches of science.

Description: Publication date: Available online 14 July 2016 Source: SoftwareX Author(s): Tobias Weber, Robert Georgii, Peter Böni Due to their non-trivial resolution function, measurements on triple-axis spectrometers require extra care from the experimentalist in order to obtain optimal results and to avoid unwanted spurious artefacts. We present a free and open-source software system that aims to ease many of the tasks encountered during the planning phase, in the execution and in data treatment of experiments performed on neutron triple-axis spectrometers. The software is currently in use and has been successfully tested at the MLZ, but can be configured to work with other triple-axis instruments and instrument control systems.

Description: Publication date: Available online 2 April 2015 Source: Dendrochronologia Author(s): H. Gärtner , L. Banzer , L. Schneider , F.H. Schweingruber , A. Bast The type of samples most commonly used in dendro sciences are increment cores of conifers. These cores allow for an easy determination and measurement of ring-width variations over long time periods. For wood anatomical analyses, the cores have to be split into pieces to enable the preparation of high quality micro sections for detailed measurements of cell properties. A major drawback of this procedure is the fact that it is labor intensive and time consuming. We present a new technique enabling the preparation of micro sections of entire increment cores up to a length of 40 cm. For that purpose we combined standard wood-anatomical techniques with the application of Mowiol glue and common Tesa tape. We tested the introduced method on increment cores of Larix decidua Mill. sampled years ago for ring-width analyses to reanalyze them on a microscopic level. The ability to cut these long sections will tremendously reduce the time needed to prepare micro sections. This is of special interest for wood anatomical image analyses of cores used before to create long ring-width chronologies for any kind of environmental reconstructions.

Description: Publication date: Available online 22 March 2016 Source: Dendrochronologia Author(s): Alexander Gradel, Christina Hänsch, Batsaikhan Ganbaatar, Batdorj Dovdondemberel, Ochirragchaa Nadaldorj, Björn Günther The mountain forest steppe and taiga in northern Mongolia have experienced a forest decline in area and quality since the end of the last century. Changes in land use, climate, fire frequency and pest occurrence are considered to be the main drivers of this vegetation shift and desertification. Because this region is the source for major rivers, is home to a unique flora and fauna and represents an important source of timber for Mongolia, the ability of different tree species to respond to these changes and regenerate is of increasing interest. Our contribution focuses on the climate-growth relationship of old and young birch trees from two valleys in the Mongolian province of Selenge Aimag. The research site Bugant, located in the Western Khentey Mountains, was the most important logging centre in Mongolia during socialist times. Today, the vegetation is dominated by succession forests of light taiga. The research site Altansumber, on the border of the Sant and Khushat soum, is dominated by light taiga and mountain forest steppe. Traditional nomads who depend on these forests for different reasons inhabit this area. Wood cores were sampled and chronologies of young and old birch trees at Bugant and Altansumber were created. Climate data were obtained from the Eroo station, which is known in the region for its long and reliable climate record. We analysed the climate-growth relationships of the chronologies from 1962 to 2009. At both sites and in both age classes, correlations with temperature were predominantly negative, particularly in April (Bugant, south- and east-facing slopes) and May (Altansumber, north-facing slopes). Precipitation of the late summer of the previous year (August/September) positively correlated with the growth of birch at Altansumber. We assume that the significant negative correlation between winter precipitation (December/January) and the growth of old birches at both sites is due to positive effects of snow cover on the survival rate of herbivorous insect populations. Our results indicate that during the early vegetation period, younger birch trees are more dependent on water availability than older ones. Negative pointer years were characterized by below-average precipitation during the current summer period and above-average spring temperatures. For the old trees, positive pointer years were characterized by above-average summer precipitation. We conclude that water availability is the most crucial factor for the growth of white birch in northern Mongolia.

Description: Publication date: March 2016 Source: Dendrochronologia, Volume 37 Author(s): Luke J. Amos-Binks, David A. MacLean We used dendrochronological analyses to identify periods of natural disturbance and resulting growth responses in 32 mixed species stands in the Acadian forest. Stands represented five different development patterns, based upon 1946 softwood (SW) content (70–80%, termed SW versus 30–60%, termed mixedwood (MW)) and change in SW content from 1946 to 2006: SW-stable, SW-declining, MW-fluctuating, MW-stable, and MW-declining. Standardized growth chronologies were developed from 1163 increment cores sampled from balsam fir ( Abies balsamea ), red spruce ( Picea rubens ), yellow birch ( Betula alleghaniensis ), and sugar maple ( Acer saccharum ). Growth chronologies clearly identified three spruce budworm ( Choristoneura fumiferana ) outbreaks from 1914 to 1921, 1954 to 1961, and 1975 to 1984, and birch dieback from 1938 to 1948. Stand developmental patterns were caused by species characteristics and multiple interacting disturbances, resulting in mortality, growth reductions, releases, and establishment of new cohorts. Balsam fir was present in all stands, but its tendency to establish and release from advanced regeneration following budworm-caused mortality resulted in cyclical proportions of fir in the canopy. Red spruce was less vulnerable to spruce budworm and longer lived, allowing them to persist and better withstand disturbance. Periodic growth index values less than 0.9 for fir and spruce were correlated with mortality of softwoods caused by defoliation, which resulted in release and growth index values >1.1 for sugar maple. Our results demonstrated substantial variation in mixedwood development patterns over a 60-year period within a small (45 km) area.

Description: Publication date: March 2016 Source: Dendrochronologia, Volume 37 Author(s): Terje Thun, Helene Svarva Nineteen Norwegian grain chests made of Scots pine ( Pinus sylvestris L.) were analyzed by measuring tree-ring widths on photographs and scanned pictures. Seventeen of the chests were successfully dated by dendrochronology. Two of the dates are corrections of an earlier dating; the ages of these two chests were verified by radiocarbon dating. The grain chests were expected to be medieval, but four, all without carvings, proved to be post-medieval. The mean curve constructed from the dated chests matches all regional Scots pine chronologies in central and southern Norway and several from southern Sweden. All the chests were probably constructed in central Norway. Originally only sixteen chests were known, but several new ones were discovered in the course of this project.

Description: Publication date: March 2016 Source: Dendrochronologia, Volume 37 Author(s): Marcelo Pablo Chartier, María Alejandra Giantomasi, Daniel Renison, Fidel Alejandro Roig Soil erosion is a serious problem of land degradation in many parts of the world, and particularly in mountain rangelands. To understand this process it is necessary to develop methods to assess soil erosion rate in a quick, economic and accurate manner. Based on the analysis of exposed Polylepis australis roots, we tested a dendrogeomorphological method for determining soil loss rate in rills and gullies. Few studies considered non-coniferous tree rings in soil erosion analysis and we used, for the first time, an experimental procedure of root exposure and provided a comparison with roots exposed by gully erosion. Our main results showed that as a consequence of soil erosion, exposed roots changed from root-like to a more stem-like wood anatomical structure. The percentage of vessel area per tree-ring area decreases by an average of 22% to 43% during the first and second year after exposure, respectively. Moreover, and during the same time interval, the mean vessel area decreased 32% and 65%, and the number of vessels increased 7% and 48%, respectively. Scars formed at the upper side of the exposed roots are coincident with changes in wood anatomy, and both evidences may be applied to reconstruct an erosion process. This study confirms that the wood anatomy analysis of partially exposed roots can be used to determine the year in which roots are exposed and provides a useful tool to monitor soil erosion rates with a high accuracy.

Description: Publication date: March 2016 Source: Dendrochronologia, Volume 37 Author(s): P. Šamonil, J. Timková, I. Vašíčková The use of individual-based models in the study of the spatial patterns of disturbances has opened new horizons in forest ecosystem research. However, no studies so far have addressed (i) the uncertainty in geostatistical modelling of the spatial relationships in dendrochronological data, (ii) the number of increment cores necessary to study disturbance spatial patterns, and (iii) the choice of an appropriate geostatistical model in relation to disturbance regime. In addressing these issues, we hope to contribute to advances in research methodology as well as to improve interpretations and generalizations from case studies. We used data from the beech-dominated Žofínský Prales forest reserve (Czech Republic), where we cored 3020 trees on 74 ha. Block bootstrap and geostatistics were applied to the data, which covered five decades with highly different disturbance histories. This allowed us to assess the general behavior of various mathematical models. Uncertainty in the spatial patterns and stability of the models was measured as the length of the 95% confidence interval (CI) of model parameters. According to Akaike Information Criterion (AIC), the spherical model fitted best at the range of ca. 20 m, while the exponential model was best at the range of ca. 60 m. However, the best fitting models were not always the most stable. The stability of models grew significantly with sample size. At 〈500 cores the spherical model was the most stable, while the Gaussian model was very unstable at 〈300 cores. The pure nugget model produced the most precise nugget estimate. The choice of model should thus be based on the expected spatial relations of the forest ecosystem under study. Sill was the most stable parameter, with an error of ±6–20% for ≥1110 core series. By contrast, practical range was the most sensitive, with an error of at least ±59%. The estimation of the spatial pattern of severe disturbances was more precise than that of fine-scale disturbances. The results suggest that with a sample size of 1000–1400 cores and a properly chosen model, one reaches a certain precision in estimation that does not increase significantly with growing sample size. It appears that in temperate old-growth forests controlled by fine-scale disturbances, it is necessary to have at least 500 cores to estimate sill, nugget and relative nugget, while to estimate practical range at least 1000 cores are needed. When choosing the best model, the stability of the model should be considered together with the value of AIC. Our results indicate the general limits of disturbance spatial pattern studies using dendrochronological and geostatistical methods, which can be only partially overcome by sample size or sampling design.

Description: Publication date: March 2016 Source: Dendrochronologia, Volume 37 Author(s): L. Dinis, M.M. Savard, P. Gammon, C. Bégin, J. Vaive This study investigates Pb isotope ratios at low concentrations (parts per billion; ppb) in tree rings and soils in the Northern Athabasca Oil Sands Region (NAOSR), western Canada, to evaluate if: (1) climatic conditions influence on tree-ring Pb assimilation; and (2) such low Pb content allows inferring the regional Pb depositional history. Our results reflect the influence of winter snow cover and the importance of minimum temperature and precipitation in spring and summer on the bioavailability of Pb and its passive assimilation by trees in sub-arctic semi-humid climatic conditions. Winter conditions can influence the state of root systems that subsequently impacts the following growth period, while spring and summer conditions likely control microbial processes and water source, and may thus impact Pb assimilation by trees. Thus, the results of tree-ring Pb concentrations show interesting correlation with cumulated snow from November of the previous year to February ( ρ = 0.53; P 〈 0.01; n = 36). Likewise, the 206 Pb/ 207 Pb ratios inversely correlate with minimum temperature from April to September ( ρ = −0.67; P 〈 0.01; n = 40) and precipitation from May to August ( ρ = −0.42; P 〈 0.01; n = 36). The isotopic results also suggest that the effects of climatic variations are superimposed by regional industrial Pb deposition: Western North American Aerosols (WNAA) and fugitive dust from the oil sands mining operations appear to be the most likely sources. Importantly, this study suggests that even at low Pb concentrations, tree-ring Pb isotopes are modulated by climatic conditions and potential input of regional and long-range transport of airborne Pb. These interpretations open the possibility of using Pb isotopes as an environmental tool for inferring the pollution history in remote regions, and improving our understanding of its natural cycle through the forest environment.

Description: Publication date: March 2016 Source: Dendrochronologia, Volume 37 Author(s): Douglas J. Stevenson, Thomas B. Lynch, Pradip Saud, Robert Heineman, Randal Holeman, Dennis Wilson, Keith Anderson, Chris Cerny, James M. Guldin Each year severe winter storms (≈ice storms) damage trees throughout the southern USA. Arkansas and Oklahoma have a history of severe winter storms. To extend that history back beyond the reach of written records, a distinctive tree ring pattern or signature is needed. Storm-caused breakage, branch loss and bending stress provide that signature. We found a severe storm signature in shortleaf pine ( Pinus echinata ). We used three published site chronologies, a set of five new site chronologies from a growth-and-yield study conducted by Oklahoma State University and the unpublished Shortleaf Canyon chronology from a master’s thesis at the University of Arkansas. Our method is based on two ring width values for the first and second growing seasons after the storm standardized to the ring widths of the seven growing seasons after the storm. Concordance between storm years predicted by tree ring patterns and actual storm years was tested using Cohen’s Kappa. Concern about confounding of ice storm signals by droughts led us to test concordance between severe storms and drought in July, August and September; results were inconclusive but stand as a warning that these two phenomena cannot be distinguished with certainty in the tree ring record. Damaging severe storms occurred in about 2.8% of all years. Two out of three storms identified as “severe” produced glaze icing.

Description: Publication date: March 2016 Source: Dendrochronologia, Volume 37 Author(s): Julieta Gabriela Arco Molina, Martín Ariel Hadad, Daniel Patón Domínguez, Fidel Alejandro Roig Frost events may damage the cambium and consequently the newly produced tracheids whose cell walls have not yet completed their lignifications, leading to the formation of frost rings. This study deals with the presence of frost rings in Araucaria araucana trees according to cambial age and bark thickness, under the assumption that these factors may be involved in physical or physiological mechanisms that increase resistance to freezing temperatures that impact the cambial tissue. The study was conducted in northern Patagonia at two sites of contrasting geomorphology, and therefore potentially associated with a differential degree of exposure to extreme cold. Wood plus bark cores were extracted from main stems at two heights from the ground and from each of the four cardinal point directions for 30 individuals per site. A Linear Mixed Model and a Generalized Linear Mixed Model were applied in order to relate the bark thickness and the frequency of frost rings in accordance with the different sampling points on the stem. It was observed that as bark becomes thicker with cambial age, the frequency of frost rings decreases, indicating a possible thermal-induced mechanism of bark protection. Consequently, there is an increase in the presence of frost rings at the younger stages of tree life. Although the mechanisms of cold hardiness in trees can be complex, including aspects of the tree physiology, our data indicated that as tree age increases, the thickness of the bark is higher, resulting in a potential effect of isolation and passive protection against the harmful effects of frosts. This mechanism may be relevant in the ecology, conservation and management of forests faced with extreme variability in future climate and changing scenarios.

Description: Publication date: March 2016 Source: Dendrochronologia, Volume 37 Author(s): Dominik Florian Stangler, Martin Mann, Hans-Peter Kahle, Elena Rosskopf, Siegfried Fink, Heinrich Spiecker Studying intra-annual wood formation dynamics provides valuable information on how tree growth and forests are affected by environmental changes and climatic extreme events. This study has the aim to evaluate and to quantify synergetic potentials emerging from a combination of current state of the art techniques used to monitor intra-annual wood formation processes. Norway spruce trees were studied in detail during the growing season 2009 with weekly sampling of microcores, high resolution point-dendrometers and wood anatomical analysis. The combination of the applied techniques allowed us to convert the spatial scales of radial tracheid diameter profiles to seasonal time scales and to synchronize fluctuations in intra-annual cell diameter profiles. This spatiotemporal information was used to validate the recently introduced software MICA ( Multiple interval-based curve alignment ) . In comparison to the conventional approach of averaging profiles of tree ring variables, the MICA aligned profiles exhibit a significantly higher synchronicity of the averaged data points. We also demonstrate two new features in the MICA application that enable to extrapolate spatiotemporal information between intra-annual profiles for the construction of robust mean (consensus) profiles that are representative for the population dynamics. By using a set of complementary techniques in an integrated approach, this study highlights a new methodological framework that can contribute to a better understanding of the environmental control of wood formation during the growing season.

Description: Publication date: March 2016 Source: Dendrochronologia, Volume 37 Author(s): Filipe Campelo, Cristina Nabais, Ana Carvalho, Joana Vieira Here we present the package tracheideR to standardize profiles of tracheid features, using the R computing environment. This package contains a collection of functions to transform the raw data obtained from image analysis into a tracheidogram to better visualize the radial intra-ring variation of histometric parameters. This procedure is crucial when estimating past weather conditions with a sub-annual resolution, since tracheidograms reflect the influence of fluctuations in weather conditions throughout the growing season (such as temperature and soil water content). The main function of this package is tracheider , which takes as input raw tracheidograms and standardizes them using three different methods. The first method standardizes the number of tracheids from different radial files to the mean number of cells, allowing that different annual rings have different number of cells. The second method normalizes the number of cells of different annual rings to the same number. Finally we present a new method to standardize histometric parameters considering the relative position of the cells within the tree ring. This package was tested using two rings of Pinus pinaster to demonstrate variations between the three methods. According to our results species with high intra- and inter-annual variability, as shown by conifers species growing under Mediterranean climate, should be standardized using the “relative position” method. Finally, we suggest that this new method should be applied to other species to check its potential to detect intra-ring fluctuations in tracheid features and to improve our capacity to detect intra-annual climatic signals.

Description: Publication date: March 2016 Source: Dendrochronologia, Volume 37 Author(s): Paolo Cherubini

Description: Publication date: March 2016 Source: Dendrochronologia, Volume 37 Author(s): Jean-Philippe Martin, Daniel Germain Dendrogeomorphology has been recognized as a useful tool to reconstruct past snow avalanche chronologies, especially in remote areas where archives are non-existent. In recent years, there have been a multiplicity of snow avalanche studies based on tree-ring analysis. Yet, the dendrogeomorphic procedure applied to snow avalanches still lacks consensus within the scientific community. This paper illustrates four issues regarding this method encountered on a dataset encompassing 293 trees sampled from 4 sites in the White Mountains (New Hampshire, United States). (1) Separating a sample in an upslope and downslope subgroup allowed to reconstruct a more thorough avalanche chronology. (2) On the other hand, a strong response at a site sheltered from any avalanche track was attributed to extreme snow loadings with a return period well above 100 years. (3) In addition to climatic disturbances, ecological disturbances such as windthrows can cause an anatomical response in the trees similar to snow avalanches. An avalanche track might act as a wind tunnel, making the underlying runout zone a suitable site to windfalls. Sampling in transects can assist in determining the limit between avalanche-related and wind-related disturbances. (4) Early-spring torrential floods and avalanche activities at a multi-process site exhibit distinct spatial patterns in the dendrogeomorphological response that allow discrimination between the two processes in the reconstruction of past chronologies. While the dendrogeomorphologist should be cautious of these issues, their acknowledgement is an opportunity to understand the interactions between the different ecological, climatic and geomorphological processes operating on the forested slopes in the alpine–subalpine environment.

Description: Publication date: Available online 23 February 2016 Source: Dendrochronologia Author(s): Irina P. Panyushkina, Alexei A. Karpukhin, Asya V. Engovatova Investigations of interactions between climate change and humans suffer from the lack of climate proxies directly linked to historical or archaeological datasets that describe past environmental conditions at a particular location and time. We present a new set of pine tree-ring records ( Pinus sylvestris L.) developed from burial timbers excavated at the historical center of Yaroslavl city, Russia. A 171-year δ 13 C tree-ring chronology from AD 1430 to AD 1600 evidences mostly wet summers during the 15th century but exceptionally dry conditions of the 16th century at the Upper Volga catchment. According to the tree-ring record there were four major droughts (〈−1.5 σ ) lasting from 9 to 26 years: 1501–1517, 1524–1533, 1542–1555 and 1570–1596, and major pluvials (>+1.5 σ ) lasting from 70 to 5 years: 1430–1500, 1518–1523, 1534–1541, and 1556–1564. We discuss a plausible contribution of these droughts to crop failures and city fires documented with historical chronicles for the Upper Volga catchment. The devastating drought regime of the 16th century corresponds to the loss of independence of the Yaroslavl principality to the Grand Duchy of Moscow and the formation of the centralized Russian State during the reign of Ivan the Terrible (1533–1584) underpinning the emergence of the Russian Empire. This study substantiates the value of archaeological timbers from the oldest Russian cities and inclusion of stable carbon isotope analysis for understanding hydroclimatic regimes across the mid latitudes of East European Plain, and their relationship to the history of Russia. Graphical abstract

Description: Publication date: Available online 4 February 2016 Source: Dendrochronologia Author(s): James H. Speer, Achim Bräuning, Qi-Bin Zhang, Kambiz Pourtahmasi, Narayan P. Gaire, Binod Dawadi, Prabina Rana, Yub Raj Dhakal, Ram Hari Acharya, Dhruba Lochan Adhikari, Shankar Adhikari, Prakash Chandra Aryal, Damodar Bagale, Binod Baniya, Sanjaya Bhandari, Navin Dahal, Suchana Dahal, Narmandakh Ganbaatar, Anjana Giri, D.B Gurung, Yeshey Khandu, Binu Maharjan, Rajan Maharjan, Rayees Ahmad Malik, Cheryl D. Nath, Bikash Nepal, Justine Ngoma, Ramesh Pant, Mitra Lal Pathak, Hari Paudel, Bimal Sharma, Md Sarwar Hossain, Bayarbaatar Soronzonbold, Thida Swe, Ichchha Thapa, Achyut Tiwari The fieldweek associated with the 4th Asian Dendrochronological Association Conference was an excellent opportunity for education, networking, and research. The participants and group leaders worked together for five days in an area that was new to some of the group leaders and new to some of the participants which enabled us to learn about forest ecology around Kathmandu and Nagarkot, Nepal. The fieldweek was an excellent networking opportunity and the group leaders and participants bonded which strengthened international research in dendrochronology and continues to foster new research collaborations. All of the group leaders and participants had the opportunity to learn about tree-ring formation in Pinus roxburghii at 1500 masl elevation, to explore its wood anatomy, and to examine specific research questions in our field area. In the end we developed a better understanding of the stand-age structure of a stand of trees in Nagarkot, explored the erosion history from exposed roots, and investigated tree health issues on closely related sites. We found that P. roxburghii poses some dating issues with false and micro rings at this elevation, but we were still able to develop a tree-ring chronology from this species and make preliminary assessments of stand dynamics and health.

Description: Publication date: Available online 15 March 2016 Source: Dendrochronologia Author(s): Ekaterina Dolgova Although long-lived trees grow in the Northern Caucasus, no single tree-ring chronology has been reported thus far from this area in the International Tree-Ring Data Base (ITRDB), neither has one been published in international journals. Extensive tree-ring studies were conducted over the last decade, and a tree-ring network was developed for the investigated area. The data on the minimum blue intensity based on 33 series of pine ( Pinus sylvestris L.) and fir ( Abies nordmanniana (Steven) Spach) is presented in this study. The minimum blue intensity (BI) chronology covers the period 1596–2011 with EPS value ≥0.85. The BI chronology strongly correlates with the mean June-September temperature (R = 0.74; p 〈 0.05) from the weather station “Kluhorskij Pereval” (1951–2011). Mean June-September temperature anomalies were reconstructed using the rescaling method. Based on the reconstruction provided in this study the twentieth century is characterized by highly increased June-September temperature. According to this study, the minimum blue intensity approach demonstrates a great potential for paleoclimatic research in the Caucasus. Vast spatial coverage of the new BI-based reconstruction based on data from only two locations in the Northern Caucasus provides prospects for reconstruction of temperature variations for a great region in the Middle East and Northern Africa.

Description: Publication date: Available online 14 December 2015 Source: Dendrochronologia Author(s): Anna V. Taynik, Valentin V. Barinov, Orlan Ch. Oidupaa, Vladimir S. Myglan, Frederick Reinig, Ulf Büntgen Tree-ring research in the Altai-Sayan Mountains so far only considered a limited number of well-replicated site chronologies. The dendroecological and palaeoclimatological potential and limitations of large parts of south-central Russia therefore remain rather unexplored. Here, we present a newly updated network of 13 larch ( Larix sibirica Ldb.) tree-ring width (TRW) chronologies from mid to higher elevations along a nearly 1000 km west-to-east transect across the greater Altai-Sayan region. All data were sampled between 2009 and 2014. The corresponding site chronologies cover periods from 440 to 860 years. The highest TRW agreement is found between chronologies ≥2200 m asl, whereas the material from lower elevations reveals overall less synchronized interannual to longer-term growth variability. While fluctuations in average June–July temperature predominantly contribute to the growth at higher elevations, arid air masses from Mongolia mainly affect TRW formation at lower elevations. Our results are indicative for the dendroclimatological potential of the Altai-Sayan Mountains, where both, variation in summer temperature and hydroclimate can be robustly reconstructed back in time. These findings are valid for a huge region in central Asia where reliable meteorological observations are spatially scarce and temporally restricted to the second half of the 20th century. The development of new high-resolution climate reconstruction over several centuries to millennia will further appear beneficial for timely endeavors at the interface of archaeology, climatology and history.

Description: Publication date: November 2015 Source: Dendrochronologia, Volume 36 Author(s): Maryann R. Pirie, Anthony M. Fowler, Christopher M. Triggs Knowing the number of rings from the pith to the last cross-dated ring on incremental cores is important for regional curve standardisation, for constructing the best chronology by excluding rings formed when the tree was young, and for forest stand dynamics and regeneration studies. As the pith is rarely present on the samples an estimate of the distance to the pith is required. The aim of this paper is to assess the accuracy of three commonly used pith offset estimation methods for estimating pith offsets from kauri incremental cores. Literature identifies three main approaches for estimating pith offsets: Duncan’s geometric method, the concentric circles method (CCM), and the radius–length method. The accuracy of geometric and CMM were assessed using virtual cores constructed from an Agathis australis (Kauri) cross-section. Then the estimates for all three methods were applied to a subset of the kauri incremental cores database. The most accurate method for estimating the pith offset for kauri trees was found to be geometric method, followed by CCM. However, these approaches could only be used to estimate the pith offset for a few cores as they require the core to pass close enough to the pith that there is visible curvature on the cores. For most cores the radius–length method is the only method available for estimating the pith offset. This method relies on the assumption that the pith is located at the geometric centre of the tree which may not be a valid assumption for some species.

Description: Publication date: Available online 11 January 2016 Source: Dendrochronologia Author(s): Lena Hellmann, Leonid Agafonov, Olga Churakova (Sidorova), Elisabeth Düthorn, Ólafur Eggertsson, Jan Esper, Alexander V. Kirdyanov, Anastasia A. Knorre, Pavel Moiseev, Vladimir S. Myglan, Anatoly N. Nikolaev, Frederick Reinig, Fritz Schweingruber, Olga Solomina, Willy Tegel, Ulf Büntgen Arctic driftwood represents a unique proxy archive at the interface of marine and terrestrial environments. Combined wood anatomical and dendrochronological analyses have been used to detect the origin of driftwood and may allow past timber floating activities, as well as past sea ice and ocean current dynamics to be reconstructed. However, the success of driftwood provenancing studies depends on the length, number, and quality of circumpolar boreal reference chronologies. Here, we introduce a Eurasian-wide high-latitude network of 286 ring width chronologies from the International Tree Ring Data Bank (ITRDB) and 160 additional sites comprising the three main boreal conifers Pinus , Larix , and Picea . We assess the correlation structure within the network to identify growth patterns in the catchment areas of large Eurasian rivers, the main driftwood deliverers. The occurrence of common growth patterns between and differing patterns within catchments indicates the importance of biogeographic zones for ring width formation and emphasizes the degree of spatial precision when provenancing. Reference chronologies covering millennial timescales are so far restricted to a few larch sites in Central and Eastern Siberia (eastern Taimyr, Yamal Peninsula and north-eastern Yakutia), as well as several pine sites in Scandinavia, where large rivers are missing though. The general good spatial coverage of tree-ring sites across northern Eurasia indicates the need for updating and extending existing chronologies rather than developing new sites.

Description: Publication date: Available online 4 February 2016 Source: Dendrochronologia Author(s): Achyut Tiwari, Ze-Xin Fan, Alistair S. Jump, Shu-Feng Li, Zhe-Kun Zhou Population structure and tree recruitment dynamics in the natural treeline ecotone of high mountains are strong indicators of vegetation responses to climate. Here, we examined recruitment dynamics of Abies spectabilis across the treeline ecotone (3439–3638 m asl) of Chimang Lekh of Annapurna Conservation Area in the Trans-Himalayan zone of central Nepal. Dendrochronological techniques were used to establish stand age structure by ring counts of adults, and by terminal bud scar count for seedlings and saplings. The results showed abundant seedling recruitment, higher regenerative inertia and colonization with a consistent range shift of the A. spectabilis treeline. The upward expansion of this sub-alpine treeline was found to be driven by a strong dependence of seedling recruitment and radial growth on snowmelt and precipitation as temperatures rise. The radial growth of A. spectabilis at the alpine timberline ecotone (ATE) and closed timberline forest (CTF) showed sensitivity to spring season (March–May) climate. Tree ring indices of CTF showed a strong positive correlation with spring and annual precipitation, and a significant negative correlation with spring and annual temperature, however, moisture sensitivity was less strong at ATE than CTF.

Description: Publication date: Available online 31 December 2015 Source: Dendrochronologia Author(s): Olga V. Churakova (Sidorova), Aleksandr V. Shashkin, Rolf T.W. Siegwolf, Renato Spahni, Thomas Launois, Matthias Saurer, Marina V. Bryukhanova, Anna V. Benkova, Anna V. Kuptsova, Philippe Peylin, Eugene A. Vaganov, Valerie Masson-Delmotte, John Roden Tree-ring width and stable isotopic composition are widely used for the reconstruction of environmental conditions. Eco-physiological models simulating δ 13 C and δ 18 O provide tools to constrain the interpretation of measured tree-ring variations and their relationships to environmental variables. Here, we apply biochemical models of photosynthesis and a model of stomatal conductance to simulate the intra-annual dynamics of δ 13 C values in photo assimilates and tree-rings. We use these models to investigate the physiological responses of larch trees growing on permafrost to variability in precipitation and permafrost depth associated with regional temperature and precipitation changes. Tree-ring width, δ 13 C and δ 18 O in wood and cellulose were measured in larch ( Larix cajanderi Mayr.) samples from northeastern Yakutia (69°N, 148°E) for the period from 1945 to 2004 and used for comparisons with modeled δ 13 C and δ 18 O data. Mechanistic models that quantify physical and biochemical fractionation processes leading to oxygen isotope variation in organic matter are used to identify source water for trees growing on permafrost in Siberia. These models allowed us to investigate the influence of a variety of climatic factors on Siberian forest ecosystem water relations that impact isotope fractionation. Based on δ 13 C and δ 18 O in tree wood and cellulose measurements as well as outputs from different eco-physiological models, we assume that larch trees from northeastern Yakutia can have limited access to the additional thawed permafrost water during dry summer periods.

Description: Publication date: Available online 20 October 2015 Source: Dendrochronologia Author(s): Vladimir V. Shishov, Ivan I. Tychkov, Margarita I. Popkova, Viсtor A. Ilyin, Marina V. Bryukhanova, Alexander V. Kirdyanov It is generally assumed in dendroecological studies that annual tree-ring growth is adequately determined by a linear function of local or regional precipitation and temperature with a set of coefficients that are temporally invariant. However, various researchers have maintained that tree-ring records are the result of multivariate, often nonlinear biological and physical processes. To describe critical processes linking climate variables with tree-ring formation, the process-based tree-ring Vaganov–Shashkin model (VS-model) was successfully used. However, the VS-model is a complex tool requiring a considerable number of model parameters that should be re-estimated for each forest stand. Here we present a new visual approach of process-based tree-ring model parameterization (the so-called VS-oscilloscope) which allows the simulation of tree-ring growth and can be easily used by researchers and students. The VS-oscilloscope was tested on tree-ring data for two species ( Larix gmelinii and Picea obovata ) growing in the permafrost zone of Central Siberia. The parameterization of the VS-model provided highly significant positive correlations ( p 〈 0.0001) between simulated growth curves and original tree-ring chronologies for the period 1950–2009. The model outputs have shown differences in seasonal tree-ring growth between species that were well supported by the field observations. To better understand seasonal tree-ring growth and to verify the VS-model findings, a multi-year natural field study is needed, including seasonal observation of the thermo-hydrological regime of the soil, duration and rate of tracheid development, as well as measurements of their anatomical features.

Description: Publication date: Available online 30 October 2015 Source: Dendrochronologia Author(s): Vladimir Matskovsky, Andrey Dolgikh, Konstantin Voronin Dendrochronology is usually the only method of precise dating of unsigned art objects made on or of wood. It has a long history of application in Europe, however in Russia such an approach is still at an infant stage, despite its cultural importance. Here we present the results of dendrochronological and radiocarbon accelerated mass spectrometry (AMS) dating of three medieval icons from the 15th–17th century that originate from the North of European Russia and are painted on wooden panels made from Scots pines. For each icon the wooden panels were dendrochronologically studied and five to six AMS dates were made. Two icons were successfully dendro-dated whereas one failed to be reliably cross-dated with the existing master tree-ring chronologies, but was dated by radiocarbon wiggle-matching. Wiggle-matching of radiocarbon dates is the most promising method for dating Russian icons in the absence of a dense dendrochronological network. However, for this case uncertainties connected with the radiocarbon method have to be taken into account and further studies of these uncertainties must be undertaken by comparing dendro-dated and radiocarbon-dated wooden works of art. Our results, moreover, showed that in two cases art-historical dates were by five to ten decades older than the earliest possible time of the creation of the icons, based on dendrochronology.

Description: 〈p〉Publication date: 1 October 2019〈/p〉 〈p〉〈b〉Source:〈/b〉 Electrochimica Acta, Volume 319〈/p〉 〈p〉Author(s): Subish John, Samba Siva Vadla, Somnath C. Roy〈/p〉 〈div xml:lang="en"〉 〈h5〉Abstract〈/h5〉 〈div〉〈p〉CuO is a narrow band gap 〈em〉p〈/em〉-type semiconducting material having a wide range of applications. However, it is quite challenging to obtain phase pure CuO nanostructures grown directly on Cu substrate as most of the synthesis techniques like thermal oxidation results in the formation of additional Cu〈sub〉2〈/sub〉O phase. In this work, we report the growth of CuO nanoflakes without the formation of Cu〈sub〉2〈/sub〉O by a facile two-step synthesis process which consist of electrochemical anodization of Cu foil followed by low-temperature hydrothermal treatment at 100 °C. The phase purity of the sample is confirmed through XRD, XPS, and HRTEM. Further, photocurrent response of the sample is evaluated, and a rapid thermal treatment was used to improve the photo-response without altering the phase and morphology of the CuO nanoflakes. Such a process at 400 °C for 10 s resulted in a high photocurrent density of −4.6 mAcm〈sup〉−2〈/sup〉 (at 0.05 V 〈em〉vs.〈/em〉 RHE under AM 1.5G conditions). Electrochemical impedance spectroscopy and Mott Schottky analysis shows the direct role of rapid thermal treatment in increasing the charge carrier density of the sample.〈/p〉〈/div〉 〈/div〉 〈h5〉Graphical abstract〈/h5〉 〈div〉〈p〉〈figure〉〈img src="https://ars.els-cdn.com/content/image/1-s2.0-S0013468619313337-fx1.jpg" width="500" alt="Image 1" title="Image 1"〉〈/figure〉〈/p〉〈/div〉

Description: 〈p〉Publication date: 1 October 2019〈/p〉 〈p〉〈b〉Source:〈/b〉 Electrochimica Acta, Volume 319〈/p〉 〈p〉Author(s): Cong Liu, Fenyun Yi, Dong Shu, Weixin Chen, Xiaoping Zhou, Zhenhua Zhu, Ronghua Zeng, Aimei Gao, Chun He, Xia Li〈/p〉 〈div xml:lang="en"〉 〈h5〉Abstract〈/h5〉 〈div〉〈p〉Three-dimensional N/S co-doped succulent-like hierarchical carbon (3D NS-SHC) is synthesized by carbonization of a supramolecular cluster. In this supramolecular process, potassium citrate can act as a reliable carbon source, while the thiourea as a N/S source and then, two molecules gradually tend to generate a giant “all-in-one” precursor via hydrogen bonding verified by Independent Gradient Model (IGM) calculation. TEM and SEM images show the N/S co-doped carbon holds a novel 3D succulent-like hierarchical structure. For NS-SHC-8:8 sample, element mapping images display the uniform N/S atoms distribution. These distinct features can be related to the supramolecular polymerization which promotes in-situ N/S co-doping homogenously and conduces to build 3D structure. Typically, NS-SHC-8:8 electrode exhibits prominent specific capacitance (258.5 F g〈sup〉−1〈/sup〉 at 0.5 A g〈sup〉−1〈/sup〉) and excellent cycle stability (94.4% after 20000 cycles) in three-electrode system. Furthermore, an assembled quasi-solid state symmetric supercapacitor delivers good energy density (10.2 Wh kg〈sup〉−1〈/sup〉 at 250 W kg〈sup〉−1〈/sup〉) and steady cycle endurance (85.1% after 10000 cycles). These eximious behaviors of NS-SHC-8:8 are mainly attributed to (1) the uniform N/S atoms distribution and their synergistic effect, which brings extra Faradaic reaction to higher specific capacitance, (2) the charming 3D succulent-like hierarchical structure, which serves as a multifunctional reservoir that can accommodate the ion/charge and facilitate their migration to further promote the electrochemical performance. Above mentions suggest that this uniformly heteroatom-modified carbon material produced by supramolecular technique is promising for high-performance energy storage devices.〈/p〉〈/div〉 〈/div〉 〈h5〉Graphical abstract〈/h5〉 〈div〉〈p〉〈figure〉〈img src="https://ars.els-cdn.com/content/image/1-s2.0-S0013468619313283-fx1.jpg" width="296" alt="Image 1" title="Image 1"〉〈/figure〉〈/p〉〈/div〉

Description: 〈p〉Publication date: 1 October 2019〈/p〉 〈p〉〈b〉Source:〈/b〉 Electrochimica Acta, Volume 319〈/p〉 〈p〉Author(s): Arunprabaharan Subramanian, Mahadeo A. Mahadik, Jin-Woo Park, In Kwon Jeong, Hee-Suk Chung, Hyun Hwi Lee, Sun Hee Choi, Weon-Sik Chae, Jum Suk Jang〈/p〉 〈div xml:lang="en"〉 〈h5〉Abstract〈/h5〉 〈div〉〈p〉Herein, we report the surface treatment on Zr〈sup〉4+〈/sup〉/Al〈sup〉3+〈/sup〉 codoped α-Fe〈sub〉2〈/sub〉O〈sub〉3〈/sub〉 photoanode for high-performance photoelectrochemical water splitting. A high-temperature quenching exhibits the Zr〈sup〉4+〈/sup〉/Al〈sup〉3+〈/sup〉 codoping in α-Fe〈sub〉2〈/sub〉O〈sub〉3〈/sub〉 photoanode without damaging morphology. The presence of Zr〈sup〉4+〈/sup〉/Al〈sup〉3+〈/sup〉 codoping shows a cathodic shift in onset potential, but lack of increment in photocurrent reveals the major role of passivation and the minimum doping effect of aluminum. Additionally, CoO〈sub〉x〈/sub〉 cocatalyst exhibits increment in photocurrent with the greater cathodic shift in onset potential than the pristine α-Fe〈sub〉2〈/sub〉O〈sub〉3〈/sub〉 nanorods. The CoO〈sub〉x〈/sub〉 surface-reworked Zr〈sup〉4+〈/sup〉/Al〈sup〉3+〈/sup〉 codoped α-Fe〈sub〉2〈/sub〉O〈sub〉3〈/sub〉 photoanode displays the highest photocurrent of 1.5 mA/cm〈sup〉2〈/sup〉 at 1.23 V vs. RHE (76% increment over the pristine α-Fe〈sub〉2〈/sub〉O〈sub〉3〈/sub〉) and 0.7 mA/cm〈sup〉2〈/sup〉 at 1.0 V vs. RHE (102% increment over the pristine α-Fe〈sub〉2〈/sub〉O〈sub〉3〈/sub〉). The systematic characterization carried out using x-ray diffraction and scanning electron microscopy confirms that after Zr〈sup〉4+〈/sup〉/Al〈sup〉3+〈/sup〉 codoping, and surface treatment, the crystalline structure, and morphology of the photoanodes remains unchanged. X-ray photoelectron spectroscopy confirmed the existence of Zr〈sup〉4+〈/sup〉/Al〈sup〉3+〈/sup〉 codopants in the hematite nanostructure. The electrochemical properties of the photoanode suggest that Al〈sup〉3+〈/sup〉 and Zr〈sup〉4+〈/sup〉 codoping, as well as surface treatment with CoO〈sub〉x〈/sub〉, cocatalyst lowers charge transfer resistance across the FTO/hematite interface, and hematite/electrolyte interface. This designs not only lowers onset potential but also offers the blueprint for the development of an efficient catalyst for solar water oxidation.〈/p〉〈/div〉 〈/div〉 〈h5〉Graphical abstract〈/h5〉 〈div〉〈p〉CoO〈sub〉x〈/sub〉 surface-reworked Zr〈sup〉4+〈/sup〉/Al〈sup〉3+〈/sup〉 codoped α-Fe〈sub〉2〈/sub〉O〈sub〉3〈/sub〉 photoanode displays the 102% increment in PEC performance than pristine α-Fe〈sub〉2〈/sub〉O〈sub〉3〈/sub〉 at 1.0 V vs. RHE.〈figure〉〈img src="https://ars.els-cdn.com/content/image/1-s2.0-S0013468619312927-fx1.jpg" width="471" alt="Image 1" title="Image 1"〉〈/figure〉〈/p〉〈/div〉

Description: 〈p〉Publication date: September 2019〈/p〉 〈p〉〈b〉Source:〈/b〉 Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, Volume 1867, Issue 9〈/p〉 〈p〉Author(s): 〈/p〉

Description: 〈p〉Publication date: Available online 8 July 2019〈/p〉 〈p〉〈b〉Source:〈/b〉 Biochimica et Biophysica Acta (BBA) - Biomembranes〈/p〉 〈p〉Author(s): Deo R. Singh, Christopher King, Matt Salotto, Kalina Hristova〈/p〉 〈div xml:lang="en"〉 〈h5〉Abstract〈/h5〉 〈div〉〈p〉EGFR is a receptor tyrosine kinase that plays a critical role in cell proliferation, differentiation, survival and migration. Its activating ligand, EGF, has long been believed to stabilize the EGFR dimer. Two research studies aimed at quantitative measurements of EGFR dimerization, however, have led to contradicting conclusions and have questioned this view. Given the controversy, here we sought to measure the dimerization of EGFR in the absence and in the presence of saturating EGF concentrations, and to tease out the effect of ligand on dimer stability, using a FRET-based quantitative method. Our measurements show that the dissociation constant is decreased ~150 times due to ligand binding, indicative of significant dimer stabilization. In addition, our measurements demonstrate that EGF binding induces a conformational change in the EGFR dimer.〈/p〉〈/div〉 〈/div〉 〈div xml:lang="en"〉 〈h5〉Graphical abstract〈/h5〉 〈div〉〈p〉〈figure〉〈img src="https://ars.els-cdn.com/content/image/1-s2.0-S0005273619301476-ga1.jpg" width="265" alt="Unlabelled Image" title="Unlabelled Image"〉〈/figure〉〈/p〉〈/div〉 〈/div〉

Description: 〈p〉Publication date: 3 September 2019〈/p〉 〈p〉〈b〉Source:〈/b〉 Biochemical and Biophysical Research Communications, Volume 516, Issue 4〈/p〉 〈p〉Author(s): Yanjie Hou, Tian Gong, Jiangtao Zhang, Xi Yang, Yurong Guo〈/p〉 〈div xml:lang="en"〉 〈h5〉Abstract〈/h5〉 〈div〉〈p〉The thinned-young apple polysaccharides from three varieties were obtained by hot water extraction at 88 ̊C for 120 min. The compositional monosaccharides of the three polysaccharides were shown to be the same (xylose, mannose, galactose and glucose) and the molecular weights of the polysaccharides were in the range of 200–300 kDa. Compared with “Qinyang” and “Pinklady”, the polysaccharide from “Jinshiji” had the highest emulsifying capacity. Moreover, the variations in pH and cation ion concentrations had also a significant effect on the emulsifying properties of the extracted polysaccharides. At pH 2.0–4.0, the prepared emulsion had smaller droplet sizes than at higher pH values. Although the emulsion was stable at low concentrations of Na〈sup〉+〈/sup〉 and Ca〈sup〉2+〈/sup〉 ions, high concentrations of Na〈sup〉+〈/sup〉 and Ca〈sup〉2+〈/sup〉 led to significant destabilization of the emulsion. Conclusively, our results demonstrated the potential application of thinned-young apple polysaccharide as a natural polysaccharide emulsifying agent.〈/p〉〈/div〉 〈/div〉

Description: 〈p〉Publication date: Available online 8 July 2019〈/p〉 〈p〉〈b〉Source:〈/b〉 Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics〈/p〉 〈p〉Author(s): Martina Paumann-Page, Rupert Tscheliessnig, Benjamin Sevcnikar, Romy-Sophie Katz, Irene Schwartz, Stefan Hofbauer, Vera Pfanzagl, Paul G. Furtmüller, Christian Obinger〈/p〉 〈div xml:lang="en"〉 〈h5〉Abstract〈/h5〉 〈div〉〈p〉Human peroxidasin 1 is a multidomain peroxidase situated in the basement membrane. The iron enzyme with covalently bound heme oxidizes bromide to hypobromous acid which facilitates the formation of distinct sulfilimine cross-links in the collagen IV network and therefore contributes to its mechanical stability. Additional to the catalytically active peroxidase domain peroxidasin comprises a leucine rich repeat domain, four Ig domains and a C-terminal von Willebrand factor type C module (VWC). Peroxidasin has been shown to form homotrimers involving two redox-sensitive cysteine residues and to undergo posttranslational C-terminal proteolytic cleavage. The present study on several recombinantly produced truncated peroxidasin variants showed that the VWC is not required for trimer formation whereas the alpha-helical linker region located between the peroxidase domain and the VWC is crucial for trimerization. Our data furthermore implies that peroxidasin oligomerization occurs intracellularly before C-terminal cleavage. For the first time we present overall solution structures of monomeric and trimeric truncated peroxidasin variants which were determined by rotary shadowing combined with transmission electron microscopy and by small-angle X-ray scattering (SAXS). A triangular arrangement of the peroxidase domains to each other within the homotrimer was revealed and this structure was confirmed by a model of trimeric peroxidase domains. Our SAXS data showed that the Ig domains are highly flexible and interact with the peroxidase domain and that within the homotrimer each alpha-helical linker region interacts with the respective adjacent peroxidase domain. The implications of our findings on the structure-function relationship of peroxidasin are discussed.〈/p〉〈/div〉 〈/div〉 〈div xml:lang="en"〉 〈h5〉Graphical abstract〈/h5〉 〈div〉〈p〉〈figure〉〈img src="https://ars.els-cdn.com/content/image/1-s2.0-S1570963919301219-ga1.jpg" width="240" alt="Unlabelled Image" title="Unlabelled Image"〉〈/figure〉〈/p〉〈/div〉 〈/div〉

Description: 〈p〉Publication date: November 2019〈/p〉 〈p〉〈b〉Source:〈/b〉 Journal of Marine Systems, Volume 199〈/p〉 〈p〉Author(s): Peisheng Huang, Kerry Trayler, Benya Wang, Amina Saeed, Carolyn E. Oldham, Brendan Busch, Matthew R. Hipsey〈/p〉 〈div xml:lang="en"〉 〈h5〉Abstract〈/h5〉 〈div〉〈p〉Effective short- and long-term estuarine water quality management decisions require a holistic view of estuarine response to multiple stressors that may be achieved through the integration of numerical modelling and observed data. Such an approach has been developed for the Swan-Canning Estuary system, a eutrophic urban estuary in Western Australia under threat from nutrient enrichment and a drying climate. Numerical modelling was integrated with long-term monitoring to develop the system Swan-Canning Estuary Virtual Observatory (SCEVO), which has been used to facilitate water quality management and streamline prediction workflows of hindcast, forecast, and environmental response functions. The system is based on a validated 3D water quality model, integrated within a data management system and related environmental models. A machine-learning method to improve the patchy and time-lagged catchment inputs is also highlighted. This work has identified that the key challenge associated with estuarine water quality prediction is the capability to (1) simulate internal physical and biogeochemical processes at suitable spatial resolution to resolve the gradients along the freshwater-ocean continuum; and (2) transition from using routine monitoring data as the basis for management decisions to using a diverse and integrated set of data streams as the basis for real-time operational decisions. Recommendations for high-frequency monitoring to support water quality modelling and dynamic integration between numerical and observed data for improved forecasting are discussed.〈/p〉〈/div〉 〈/div〉

Description: 〈p〉Publication date: December 2019〈/p〉 〈p〉〈b〉Source:〈/b〉 Journal of Physics and Chemistry of Solids, Volume 135〈/p〉 〈p〉Author(s): Lamya H. Al-Wahaibi, Yusuf Sert, Fatih Ucun, Nora H. Al-Shaalan, Aisha Alsfouk, Ali A. El-Emam, Mustafa Karakaya〈/p〉 〈div xml:lang="en"〉 〈h5〉Abstract〈/h5〉 〈div〉〈p〉This research relates to the molecular structure, electronic properties and IR, Raman and XPS analyses of the potential chemotherapeutic agent namely, 5-(adamantan-1-yl)-〈em〉N〈/em〉-methyl-1,3,4-thiadiazol-2-amine. Another purpose is to explore the structural stabilities and consistencies and, to assess the stable interaction energy and intermolecular hydrogen bond geometry for its dimeric structure. The monomer and dimer optimizations of the molecule have been calculated by the DFT method using various functionals such as B3LYP, B3PW91, mPW1PW91 and M06-2X. Although the minimum energy optimization was calculated at the B3LYP functional, the BSSE-corrected and uncorrected interaction energies of the dimer structure were more effectively obtained with the M062X functional. This assured us a test of the efficiency of M06-Class functional calculations on intermolecular interactions of strongly bound systems. Additionally, the molecular docking study was done between our molecule (ligand) and the previously studied and known as cortisone reductase 11β-Hydroxysteroid dehydrogenase type 1 (receptor, 11-β-HSD1: PDB-2ILT).〈/p〉〈/div〉 〈/div〉 〈h5〉Graphical abstract〈/h5〉 〈div〉〈p〉〈figure〉〈img src="https://ars.els-cdn.com/content/image/1-s2.0-S0022369718334346-fx1.jpg" width="455" alt="Image 1" title="Image 1"〉〈/figure〉〈/p〉〈/div〉

Description: 〈p〉Publication date: Available online 8 July 2019〈/p〉 〈p〉〈b〉Source:〈/b〉 Journal of Quantitative Spectroscopy and Radiative Transfer〈/p〉 〈p〉Author(s): Adrian Doicu, Michael I. Mishchenko〈/p〉 〈h5〉Abstract〈/h5〉 〈div〉〈p〉The problem of backscattering of light by a discrete random medium illuminated by an obliquely incident plane electromagnetic wave is considered. The analysis is performed in a linear-polarization basis and includes (i) a complete derivation of the cross reflection matrix for a layer with densely and sparsely distributed particles, (ii) the design of an approximate method for computing the ladder and cross reflection matrices in the case of a semi-infinite medium with a sparse distribution of particles, (iii) the derivation of the relations between the elements of the ladder and cross reflection matrices in the exact backscattering direction for dense and sparse media, and (iv) the development of practical algorithms for solving the underlying integral equations by the method of Picard iterations and the discrete ordinate method. Simulation results for particles with large size parameters are also presented.〈/p〉〈/div〉

Description: 〈p〉Publication date: December 2019〈/p〉 〈p〉〈b〉Source:〈/b〉 Journal of Physics and Chemistry of Solids, Volume 135〈/p〉 〈p〉Author(s): Hongfang Jiu, Na Ren, Lixin Zhang, Qing Zhang, Yuying Gao, Yajuan Meng〈/p〉 〈div xml:lang="en"〉 〈h5〉Abstract〈/h5〉 〈div〉〈p〉The flower-like ZnMn〈sub〉2〈/sub〉O〈sub〉4〈/sub〉 hollow microtubules were synthesized by a hydrothermal method and calcination method. The composition and morphology were characterized. The results showed that flower-like hollow microtubules were obtained through calcination treatment. The as-prepared ZnMn〈sub〉2〈/sub〉O〈sub〉4〈/sub〉 electrochemical properties of flower-like hollow microtubules anode material for lithium-ion batteries were investigated. The first charge and discharge capacity was measured at 2152/1263 mA h g〈sup〉−1〈/sup〉 when the current density at 400 mA g〈sup〉−1〈/sup〉. After 300 cycles, the capacity kept 515 mA h g〈sup〉−1〈/sup〉 corresponding to the coulombic efficiency of 99%, which exhibited preferable cycling performance. The stability of the structure has been shown by rate performance, which had been tested under different current density. The results suggest a promising application of the ZnMn〈sub〉2〈/sub〉O〈sub〉4〈/sub〉 as anode material for lithium-ion batteries.〈/p〉〈/div〉 〈/div〉 〈h5〉Graphical abstract〈/h5〉 〈div〉〈p〉〈figure〉〈img src="https://ars.els-cdn.com/content/image/1-s2.0-S0022369718333468-fx1.jpg" width="500" alt="Image 1" title="Image 1"〉〈/figure〉〈/p〉〈/div〉

Description: 〈p〉Publication date: December 2019〈/p〉 〈p〉〈b〉Source:〈/b〉 Journal of Physics and Chemistry of Solids, Volume 135〈/p〉 〈p〉Author(s): Takahiro Iijima, Tadashi Shimizu, Atsushi Goto, Kenzo Deguchi, Toshihito Nakai, Ryutaro Ohashi, Masayoshi Saito〈/p〉 〈div xml:lang="en"〉 〈h5〉Abstract〈/h5〉 〈div〉〈p〉In Ti-based Ziegler-Natta catalysts (ZNCs), disagreements exist concerning which lateral surface of the MgCl〈sub〉2〈/sub〉 support adsorbs Ti species so as to be an active site for the catalysis of polymerization. In the present paper, we investigated the local structure of TiCl〈sub〉4〈/sub〉 adsorbed onto the surface of MgCl〈sub〉2〈/sub〉 by 〈sup〉47,49〈/sup〉Ti solid-state nuclear magnetic resonance (NMR) spectra at 21.8 T along with density functional theory (DFT) calculations. The magic-angle-spinning NMR spectrum of the TiCl〈sub〉4〈/sub〉/MgCl〈sub〉2〈/sub〉 adduct sample prepared by 20 h of milling, which exhibited broadened and shifted peaks compared to that of the sample without milling, was simulated by a Czjzek model considering the distribution of quadrupole interaction parameters. The electric field gradient and chemical shielding tensors of 〈sup〉49〈/sup〉Ti were obtained via DFT calculations for model molecules of TiCl〈sub〉4〈/sub〉, 2TiCl〈sub〉4〈/sub〉, and Ti〈sub〉2〈/sub〉Cl〈sub〉8〈/sub〉 adsorbed onto the (110), (104), and (104)-step defect surfaces of MgCl〈sub〉2〈/sub〉. By comparing the obtained NMR parameters, the 〈sup〉47,49〈/sup〉Ti NMR spectrum of the milled sample was assigned to TiCl〈sub〉4〈/sub〉 adsorbed onto the (104) surface of MgCl〈sub〉2〈/sub〉, which may not be a principal component of adsorption.〈/p〉〈/div〉 〈/div〉 〈h5〉Graphical abstract〈/h5〉 〈div〉〈p〉〈figure〉〈img src="https://ars.els-cdn.com/content/image/1-s2.0-S002236971930472X-fx1.jpg" width="380" alt="Image 1" title="Image 1"〉〈/figure〉〈/p〉〈/div〉

Description: 〈p〉Publication date: November 2019〈/p〉 〈p〉〈b〉Source:〈/b〉 Journal of Marine Systems, Volume 199〈/p〉 〈p〉Author(s): Arseny A. Kubryakov, Alexander S. Mikaelyan, Sergey V. Stanichny〈/p〉 〈div xml:lang="en"〉 〈h5〉Abstract〈/h5〉 〈div〉 〈p〉Bio-Argo measurements of the backscattering coefficient (〈em〉bbp〈/em〉) were used to investigate the time-depth evolution of coccolithophore blooms in the Black Sea. Five years of Bio-Argo data obtained in 2014–2018 revealed two distinct peaks of 〈em〉bbp〈/em〉 corresponding to the winter and early summer coccolithophore blooms. The latter started in the upper mixed layer (UML) in April–May and was characterized by the highest coccolithophore concentrations. During the most extensive summer bloom in 2017, its estimates reach 10 × 10〈sup〉6〈/sup〉 cells l〈sup〉−1〈/sup〉. The summer blooms occupied the UML (0–10 m) and a seasonal thermocline (10–30 m). The lower boundary of the bloom was related to the position of isopycnal 1014 kg m〈sup〉−3〈/sup〉, which deepens in May–July due to summer heating. Consequently, the coccolithophore bloom deepened to 20–30 m and terminated rapidly in July. Bloom termination was accompanied by a significant rise in light attenuation (〈em〉kd〈/em〉) in the sea basin. This peak was attributed to the release of dissolved organic carbon (DOC), which was possibly related to viral lysis and the exudation of lipids from coccolithophore cells. Data on the 〈em〉kd〈/em〉 was used to estimate the seasonal variability in DOC in the Black Sea. Maximal estimated values of DOC were observed at 15–35 m depth in June-August and coincided with the early summer coccolithophore bloom termination.〈/p〉 〈p〉The winter coccolithophore bloom started in October–November in the UML. The maximum 〈em〉bbp〈/em〉 was observed in January. High values of 〈em〉bbp〈/em〉 were observed down to a depth of 60 m during the maximal deepening of the mixed layer. The winter blooms were distinctly observed in MODIS satellite images, where they were characterized by high reflectance and relatively low chlorophyll concentrations. The estimated coccolithophore concentration in winter was lower than that in summer, but column-averaged 〈em〉bbp〈/em〉 values were comparable. The winter coccolithophore bloom reached a peak within one month after the autumn peak of chlorophyll A, indicating the possible importance of the nutrients recycled after the diatom autumn bloom. In contrast to summer, the maximum DOC observed at the surface preceded the winter coccolithophore bloom, and the mass DOC production was probably attributed to the excretion and lysis of the non-calcified phytoplankton cells.〈/p〉 〈/div〉 〈/div〉

Description: 〈p〉Publication date: Available online 8 July 2019〈/p〉 〈p〉〈b〉Source:〈/b〉 Journal of Computational Physics〈/p〉 〈p〉Author(s): Maxim Rakhuba, Alexander Novikov, Ivan Oseledets〈/p〉 〈h5〉Abstract〈/h5〉 〈div〉〈p〉Such problems as computation of spectra of spin chains and vibrational spectra of molecules can be written as 〈em〉high-dimensional eigenvalue problems〈/em〉, i.e., when the eigenvector can be naturally represented as a multidimensional tensor. Tensor methods have proven to be an efficient tool for the approximation of solutions of high-dimensional eigenvalue problems, however, their performance deteriorates quickly when the number of eigenstates to be computed increases. We address this issue by designing a new algorithm motivated by the ideas of 〈em〉Riemannian optimization〈/em〉 (optimization on smooth manifolds) for the approximation of multiple eigenstates in the 〈em〉tensor-train format〈/em〉, which is also known as matrix product state representation. The proposed algorithm is implemented in TensorFlow, which allows for both CPU and GPU parallelization.〈/p〉〈/div〉

Description: 〈p〉Publication date: Available online 8 July 2019〈/p〉 〈p〉〈b〉Source:〈/b〉 Journal of Computational Physics〈/p〉 〈p〉Author(s): Chen Liu, Florian Frank, Faruk O. Alpak, Béatrice Rivière〈/p〉 〈h5〉Abstract〈/h5〉 〈div〉〈p〉Permeability estimation of porous media from directly solving the Navier–Stokes equations has a wide spectrum of applications in petroleum industry. In this paper, we utilize a pressure-correction projection algorithm in conjunction with the interior penalty discontinuous Galerkin scheme for space discretization to build an incompressible Navier–Stokes simulator and to use this simulator to calculate permeability of real rock samples. The proposed method is accurate, numerically robust, and exhibits the potential for tackling realistic problems.〈/p〉〈/div〉

Description: 〈p〉Publication date: November 2019〈/p〉 〈p〉〈b〉Source:〈/b〉 Journal of Marine Systems, Volume 199〈/p〉 〈p〉Author(s): Yuanyi Li, Huan Feng, Haiwen Zhang, Jian Sun, Dekui Yuan, Lei Guo, Jing Nie, Jinglong Du〈/p〉 〈div xml:lang="en"〉 〈h5〉Abstract〈/h5〉 〈div〉〈p〉The time required for water exchange characterizes the hydrodynamic condition of a water body, which is related to its self-purification ability. In this study, a numerical model based on a three-dimensional hydrodynamic model is established and implemented to calculate the age of water. Using the model, the spatial distribution and seasonal variation of the age of the water discharged into the New York/New Jersey (NY/NJ) Harbor from the Passaic River and the Hackensack River are calculated. The hydrodynamic conditions and the characteristics of water exchange in the harbor are analyzed from the perspective of age. The results indicate that the monthly-averaged age at the entrance of the NY/NJ Harbor is approximately 26 days and 40 days during the wet season and the dry season, respectively. River discharge has a significant impact on the spatial distribution of water age in the NY/NJ Harbor. Generally, high river discharge results in better water exchange and flushes contaminants out of the harbor quickly. However, discharges from several rivers flowing into the harbor interact and interfere with one another. Such interactions can improve or inhibit water and contaminant flushing from the harbor. The analysis of age variations and residual flows indicates that the Kill van Kull is one of the key channels controlling the contaminant transport and water quality in the Newark Bay. This study demonstrates the advantages of using water age to study the water exchange and physical self-purification ability of this complex harbor.〈/p〉〈/div〉 〈/div〉

Description: 〈p〉Publication date: Available online 8 July 2019〈/p〉 〈p〉〈b〉Source:〈/b〉 Journal of Computational Physics〈/p〉 〈p〉Author(s): Mustapha Malek, Nouh Izem, M. Shadi Mohamed, Mohammed Seaid, Omar Laghrouche〈/p〉 〈h5〉Abstract〈/h5〉 〈div〉〈p〉An efficient partition of unity finite element method for three-dimensional transient diffusion problems is presented. A class of multiple exponential functions independent of time variable is proposed to enrich the finite element approximations. As a consequence of this procedure, the associated matrix for the linear system is evaluated once at the first time step and the solution is obtained at subsequent time step by only updating the right-hand side of the linear system. This results in an efficient numerical solver for transient diffusion equations in three space dimensions. Compared to the conventional finite element methods with 〈em〉h〈/em〉-refinement, the proposed approach is simple, more efficient and more accurate. The performance of the proposed method is assessed using several test examples for transient diffusion in three space dimensions. We present numerical results for a transient diffusion equation with known analytical solution to quantify errors for the new method. We also solve time-dependent diffusion problems in complex geometries. We compare the results obtained using the partition of unity finite element method to those obtained using the standard finite element method. It is shown that the proposed method strongly reduces the necessary number of degrees of freedom to achieve a prescribed accuracy.〈/p〉〈/div〉

Description: 〈p〉Publication date: Available online 8 July 2019〈/p〉 〈p〉〈b〉Source:〈/b〉 Journal of Computational Physics〈/p〉 〈p〉Author(s): Lahbib Bourhrara〈/p〉 〈h5〉Abstract〈/h5〉 〈div〉〈p〉This document presents a new numerical scheme dealing with the Boltzmann transport equation. This scheme is based on the expansion of the angular flux in a truncated spherical harmonics function and the discontinuous finite element method for the spatial variable. The advantage of this scheme lies in the fact that we can deal with unstructured, non-conformal and curved meshes. Indeed, it is possible to deal with distorted regions whose boundary is constituted by edges that can be either line segments or circular arcs or circles. In this document, we detail the derivation of the method for 2D geometries. However, the generalization to 2D extruded geometries is trivial.〈/p〉〈/div〉