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  • 1
    Publication Date: 2024-07-07
    Description: Fatty acid (FA) composition has increasingly been used to estimate the dietary preference of marine organisms. Specific fatty acids and fatty acid ratios serve as trophic markers (FATM) and have the potential to provide insights on the long-term dietary preference of organisms. FATM have been applied for this purpose on various zooplankton, fish and up to whales. We aim to build up a database of new and published data on fatty acid content of mesopelagic fish and their predators from the central and Northeast Atlantic, and the Mediterranean Sea, to use in FATM food web studies, investigating the importance of mesopelagic organisms as predators and prey in the marine ecosystem. Here we compiled FA content (i.e., the proportion of each FA measured in sampled tissues or in the whole body of organisms in relation to total FAs analysed) of 36 fish species or genera, 15 seabirds, five marine mammals, two cephalopods, one turtle, one jelly fish, and one shark. For each record, we included all FAs with values above 0.1% of total FAs and report the percentage values as provided in the original data source. Each data record is associated with information on the sampling location, geographic coordinates, month and year of sample collection, method of sample collection, taxonomic ranks (phylum, class, order, family), number and size (or size range) of sampled organisms, as well as the reference and DOI of the original data source, for further details on the samples analysed and/or the analytical techniques used.
    Keywords: (9Z)-heptadec-9-enoic acid; (9Z)-heptadec-9-enoic acid, standard deviation; 12,15 Octadecadienoic acid of total fatty acids; 3,6,9,12 Hexadecatetraenoic acid of total fatty acids; 4,7,10,13,16-Docosapentaenoic acid; 6,9,12,15-Hexadecatetraenoic acid of total fatty acids; 6,9,12-Hexadecatrienoic acid of total fatty acids; 9,12-Hexadecadienoic acid of total fatty acids; 9-Tetradecenoic acid of total fatty acids; 9-Tetradecenoic acid of total fatty acids, standard deviation; Adriatic_Sea_comp; all-cis-11,14,17-Eicosatrienoic acid of total fatty acids; all-cis-11,14,17-Eicosatrienoic acid of total fatty acids, standard deviation; all-cis-11,14-Eicosadienoic acid of total fatty acids; all-cis-11,14-Eicosadienoic acid of total fatty acids, standard deviation; all-cis-11,14-Octadecadienoic acid of total fatty acids; all-cis-13,16,19-Docosatrienoic acid of total fatty acids; all-cis-3,6,9,12,15-Octadecapentaenoic acid of total fatty acids; all-cis-4,7,10,13,16,19-Docosahexaenoic acid of total fatty acids; all-cis-4,7,10,13,16,19-Docosahexaenoic acid of total fatty acids, standard deviation; all-cis-4,7,10,13,16-Docosapentaenoic acid, standard deviation; all-cis-5,8,11,14,17-Eicosapentaenoic acid of total fatty acids; all-cis-5,8,11,14,17-Eicosapentaenoic acid of total fatty acids, standard deviation; all-cis-5,8,11,14-Eicosatetraenoic acid of total fatty acids; all-cis-5,8,11,14-Eicosatetraenoic acid of total fatty acids, standard deviation; all-cis-6,9,12,15,18-Heneicosapentaenoic acid of total fatty acids; all-cis-6,9,12,15,18-Heneicosapentaenoic acid of total fatty acids, standard deviation; all-cis-6,9,12,15-Hexadecatetraenoic acid of total fatty acids, standard deviation; all-cis-6,9,12,15-Octadecatetraenoic acid of total fatty acids; all-cis-6,9,12,15-Octadecatetraenoic acid of total fatty acids, standard deviation; all-cis-6,9,12-Octadecatrienoic acid of total fatty acids; all-cis-6,9,12-Octadecatrienoic acid of total fatty acids, standard deviation; all-cis-7,10,13,16,19-Docosapentaenoic acid of total fatty acids; all-cis-7,10,13,16,19-Docosapentaenoic acid of total fatty acids, standard deviation; all-cis-7,10,13,16-Docosatetraenoic acid of total fatty acids; all-cis-7,10,13,16-Docosatetraenoic acid of total fatty acids, standard deviation; all-cis-7,10,13-Hexadecatrienoic acid of total fatty acids; all-cis-7,10-Hexadecadienoic acid of total fatty acids; all-cis-8,11,14,17-Eicosatetraenoic acid of total fatty acids; all-cis-8,11,14,17-Eicosatetraenoic acid of total fatty acids, standard deviation; all-cis-8,11,14-Eicosatrienoic acid of total fatty acids; all-cis-8,11,14-Eicosatrienoic acid of total fatty acids, standard deviation; all-cis-9,12,15-Hexadecadienoic acid of total fatty acids; all-cis-9,12,15-Octadecatrienoic acid of total fatty acids; all-cis-9,12,15-Octadecatrienoic acid of total fatty acids, standard deviation; all-cis-9,12-Hexadecadienoic acid of total fatty acids, standard deviation; all-cis-9,12-Hexadecatrienoic acid of total fatty acids, standard deviation; all-cis-9,12-Octadecadienoic acid of total fatty acids; all-cis-9,12-Octadecadienoic acid of total fatty acids, standard deviation; Azores_comp; Balearic_Sea_comp; Barbate_comp; Barents_Sea_comp; Canary_Islands_comp; Cape_Verde_comp; Catalonian_Sea_comp; Central_Northeastern_Atlantic_comp; Cephalopods; cis-10-Heptadecenoic acid of total fatty acids; cis-10-Heptadecenoic acid of total fatty acids, standard deviation; cis-11-Docosenoic acid of total fatty acids; cis-11-Docosenoic acid of total fatty acids, standard deviation; cis-11-Hexadecenoic acid of total fatty acids, standard deviation; cis-11-Hexadecenoic acid of total fatty acids (IUPAC: (11Z)-hexadec-11-enoic acid); cis-11-Icosenoic acid of total fatty acids; cis-11-Icosenoic acid of total fatty acids, standard deviation; cis-11-Octadecenoic acid of total fatty acids, standard deviation; cis-11-Octadecenoic acid of total fatty acids (IUPAC: Octadec-11-enoic acid); cis-13-Docosenoic acid of total fatty acids; cis-13-Docosenoic acid of total fatty acids, standard deviation; cis-13-Icosenoic acid of total fatty acids; cis-13-Icosenoic acid of total fatty acids, standard deviation; cis-13-Octadecenoic acid of total fatty acids; cis-13-Octadecenoic acid of total fatty acids, standard deviation; cis-15-Docosenoic acid of total fatty acids; cis-15-Docosenoic acid of total fatty acids, standard deviation; cis-15-Tetracosenoic acid of total fatty acids; cis-15-Tetracosenoic acid of total fatty acids, standard deviation; cis-7-Hexadecenoic acid of total fatty acids; cis-7-Hexadecenoic acid of total fatty acids, standard deviation; cis-9-Hexadecenoic acid of total fatty acids, standard deviation; cis-9-Hexadecenoic acid of total fatty acids (IUPAC: (9Z)-hexadec-9-enoic acid); cis-9-Icosanoic acid of total fatty acids; cis-9-Icosanoic acid of total fatty acids, standard deviation; cis-9-Octadecenoic acid of total fatty acids (IUPAC: Octadec-9-enoic acid); Class; Comment; Decanoic acid of total fatty acids; DEPTH, water; Docosanoic acid, standard deviation; Docosanoic acid of total fatty acids; Dodecanoic acid of total fatty acids; Dodecanoic acid of total fatty acids, standard deviation; dolphins; Ebro_Delta_comp; elasmobranchs; Event label; Family; fatty acids; Finnmark_comp; Gear; Heptadecanoic acid, standard deviation; Heptadecanoic acid of total fatty acids; Hexadecadienoic acid of total fatty acids; Hexadecanoic acid, standard deviation; Hexadecanoic acid of total fatty acids; Hexadecatetraenoic acid of total fatty acids; Hexadecatetraenoic acid of total fatty acids, standard deviation; Hexadecatrienoic acid of total fatty acids; Hexadecatrienoic acid of total fatty acids, standard deviation; Hexadecenoic acid of total fatty acids; Icosanoic acid, standard deviation; Icosanoic acid of total fatty acids; Institution; Investigator; Irminger_Sea_comp; Isle_of_May_comp; Jellyfish; LATITUDE; Lipids, per total wet mass; Location; Lofoten_Vesteralen_comp; LONGITUDE; Madeira_comp; marine mammals; Mauritania_comp; mesopelagic fish; mesopelagic food web; Mid_North_Atlantic_comp; Month; North_Sea_comp; Norwegian_Sea_North_comp; Number of individuals; Ocean and sea region; Octadec-7-enoic acid of total fatty acids; Octadec-7-enoic acid of total fatty acids, standard deviation; Octadec-9-enoic acid, standard deviation; Octadecanoic acid, standard deviation; Octadecanoic acid of total fatty acids; Octadecatetraenoic acid 18:4(n-4) of total fatty acids; Octadecenoic acid of total fatty acids; Order; Organisms; Pentadecanoic acid, standard deviation; Pentadecanoic acid of total fatty acids; Persistent Identifier; Phylum; Raso_Islet_Cape_Verde_comp; Record number; Reference/source; Replicates; Reykjanes_Ridge_comp; Seabirds; Size; Spanish_coast_comp; Spitsbergen_Bear_Island_comp; SUMMER; Sustainable Management of Mesopelagic Resources; Svalbard_comp; Taxon/taxa; Taxon/taxa, unique identification (Semantic URI); Taxon/taxa, unique identification (URI); Tetracosanoic acid, standard deviation; Tetracosanoic acid of total fatty acids; Tetradecanoic acid, standard deviation; Tetradecanoic acid of total fatty acids; trophic markers; Tropic_Seamount_comp; Wet mass; Year of observation
    Type: Dataset
    Format: text/tab-separated-values, 16550 data points
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  • 2
    Publication Date: 2024-07-07
    Keywords: 0016PG; 0021PG; 0026PG; 0032PG; 0036PG; 0038PG; 0044PG; 0050PG; 0055PG; 0058PG; 0066PG; 0071PG; 0075PG; 0082PG; 0091PG; 108-658; 130-807A; 138-846; 154-928; 162-980; 162-982; 162-983; 162-984; 177-1088B; 177-1089; 177-1090; 184-1143; 293; 303-U1308; 311; 52-43; 68-502; 90b; Agadir Canyon; ANT-XI/2; Arabian Sea; Atlantic Ocean; BIGSET; Biscaya; Brazil Basin; BT4; CALYPSO; Calypso Corer; Calypso Square Core System; Canarias Sea; Cape Basin; Caribbean Sea/RIDGE; CASQS; CH73-139; CH73-139C; CH7X; CH8X; Chatham Rise; CHN115-70PC; CHN82-24; Comment; COMPCORE; Composite Core; DRILL; Drilling/drill rig; East Atlantic; ELEVATION; EN06601; EN066-16PG; EN066-21PG; EN066-26PG; EN066-32PG; EN066-36PG; EN066-38PG; EN066-44PG; Endeavor; Event label; EW9209-1JPC; EW9504-05PC; Exp303; FR01/97; FR01/97-12; Franklin; GC; GeoB1041; GeoB1101-4; GeoB1112-3; GeoB1117-2; GeoB1118; GeoB1211; GeoB1214-1; GeoB1710-3; GeoB3004-1; GeoB3104-1; GeoB4216-1; GeoB4240-2; GeoB6718-2; GeoB7920-2; GeoB9508-5; GeoB9526-5; GEOFAR; GEOTROPEX 83, NOAMP I; GGC; Giant box corer; Giant gravity corer; Giant piston corer; GIK11944-2; GIK12328-5; GIK12347-2; GIK12379-3; GIK12392-1; GIK13521-1; GIK15612-2; GIK15666-6; GIK15669-1; GIK15672; GIK16004-1; GIK16006-1; GIK16017; GIK16030-1; GIK16402; GIK16415; GIK17049-6; GIK17050-1; GIK17051; GIK17055-1; GIK17961-2; GIK23414-9; GIK23415-9; GIK23416-4; GIK23417-1; GIK23418-8; GIK23419-8; GIK23519-5; GKG; Glomar Challenger; GPC; Gravity corer; Gravity corer (Kiel type); Greenland Sea; Guinea Basin; Gulf of Aden; Hakurei-Maru No.2 (1980); HM52-43; IMAGES I; IMAGES II; IMAGES III - IPHIS; IMAGES V; IMAGES VII - WEPAMA; IMAGES XV - Pachiderme; Integrated Ocean Drilling Program / International Ocean Discovery Program; IODP; Jean Charcot; Joides Resolution; JOPSII-6; JPC; Jumbo Piston Core; KAL; Kasten corer; KF13; KL-74, AS-12; KN11002; KN159-5; Knorr; KNR110-50; KNR110-55; KNR110-58; KNR110-66; KNR110-71; KNR110-75; KNR110-82; KNR110-91; KNR159-17; KNR159-20; KNR159-33; KNR159-36; KNR159-42; KNR159-5; KNR159-5-125GGC; KNR159-5 17JPC; KNR159-5-22GGC; KNR159-5 30GGC; KNR159-5-30GGC; KNR159-5-33GGC; KNR159-5-36GGC; KNR159-5-63GGC; KNR159-5-78GGC; KNR159-5 90GGC; KNR159-63; KNR159-90; KOL; LATITUDE; Leg108; Leg130; Leg138; Leg154; Leg162; Leg177; Leg184; Leg68; Le Noroit; Le Suroît; LONGITUDE; M11/1; M12/1; M12392-1; M17/2; M20/2; M23; M23_099; M23414; M25; M31/3; M31/3-107_GC; M35/1; M35003-4; M37/1; M39; M53; M53_166; M53_169; M53_172-1; M53/1; M57; M6/6; M60; M65; M65/1; M9/4; Marion Dufresne (1995); MD012378; MD01-2378; MD07-3076; MD07-3076Q; MD101; MD105; MD106; MD114; MD122; MD159; MD952039; MD95-2039; MD952040; MD95-2040; MD96-2080; MD962080, ABS; MD972120; MD97-2120; MD972151; MD97-2151; MD99-2334; Meteor (1964); Meteor (1986); MONITOR MONSUN; N414NGC102; NA87-22; Namibia continental slope; NE-Brazilian continental margin; NH95-1; NH95-1_N414; Nordost-Atlantik-Expedition 1971; North Atlantic; North Atlantic Climate 1; Northeast Atlantic; Northeast Pacific; northern North Atlantic; Norwegian Sea; OCE205-103GGC; OCE205-2-103GGC; Ocean and sea region; off West Africa; Orgon4-KS8; PALEOCINAT; PC; Persistent Identifier; Piston corer; Piston corer (Kiel type); Polarstern; Porcupine Seabight; Porto Seamount; POS210/2; POS265; POS478-2; Poseidon; PS2498-1; PS28; PS28/304; RC13; RC13-110; RC13-114; RC13-228; RC16; RC16-119; RC16-84; Reference/source; Robert Conrad; Sample code/label; SL; SO42; SO42-74KL; SO95; Sonne; South Atlantic; South Atlantic Ocean; South China Sea; Southern Agulhas Bank; South Pacific Ocean; Southwest Pacific; SPC; Sphincter corer; SU90-03; SU90-39; SUBTROPEX 82; Timor Sea; Uniform resource locator/link to reference; V19; V19-27; V22; V22-197; V23; V23-81; V24; V24-109; V24-253; V25; V25-59; V28; V28-127; V28-14; V29; V29-135; V29-202; V30; V30-40; V30-49; Vema; Vema Channel; Victor Hensen; Walvis Ridge; West equatorial Pacific Ocean; Western Atlantic
    Type: Dataset
    Format: text/tab-separated-values, 469 data points
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  • 3
    Publication Date: 2024-07-07
    Description: The ²³⁴Th-²³⁸U radioactive pair has been extensively used to evaluate the efficiency with which photosyntetically fixed carbon is exported from the surface ocean by means of the biological pump since the 90's. The seminal work of Buesseler et al. (1992) proposed that particulate organic carbon (POC) flux can be indirectly calculated from ²³⁴Th distributions if the ratio of POC to ²³⁴Th measured on sinking particles (POC:²³⁴Th) at the desired export depth is known. Since then, a huge amount of ²³⁴Th depth profiles have been collected using a variety of sampling instruments and strategies that have changed along years. This is a global oceanic compilation of ²³⁴Th measurements, that collects results from innumerable researchers and laboratories over a period exceeding 50 years. The present compilation is made of a total 223 datasets: 214 from studies published either in articles in referred journals, PhD thesis or repositories, and 9 unpublished datasets. Including measurements from JGOFS, VERTIGO and GEOTRACES programs, with sampling from approximately 5000 locations spanning all the oceans. The compilation includes total ²³⁴Th profiles, dissolved and particulate ²³⁴Th concentrations, and POC:²³⁴Th ratios (both from pumps and sediment traps) for two sizes classes (1-53 μm and 〈 53 μm) when available. Appropriate metadata have been included, including geographic location, date, and sample depth, among others. When available, we also include water temperature, salinity, ²³⁸U data and particulate organic nitrogen data. Data sources and methods information (including ²³⁸U and ²³⁴Th) are also detailed along with valuable information for future data analysis such as bloom stage and steady/non-steady state conditions at the sampling moment. This undertaking is a treasure of data to understand and quantify how oceanic carbon cycle functions and how it will change in future. The compilation can be downloaded in three different ways: 1) A single merged file including all the individual excel files. This option can be accessed under "Other version: More than 50 years of Th-234 data: a comprehensive global oceanic compilation (single xlsx file)". 2) A summary table that includes details from cruise, sampling dates, techniques applied, authors and DOI of the compiled ²³⁴Th data, among others, each line corresponds to a specific dataset. The table can be accessed by clicking ""View dataset as HTML" and downloaded in "Download dataset as tab-delimited text". 3) Individual Excel files for each dataset can be manually chosen from the summary table, corresponding to the complete ²³⁴Th dataset and metadata from a specific publication or program. This option is available by clicking "View dataset as HTML". Furthermore, all files referred to can be downloaded in one go as ZIP or TAR.
    Keywords: 234Th; Author(s); Binary Object; biological carbon pump; Carbon, organic, particulate/Thorium-234 ratio; carbon export; Chief scientist(s); Cruise/expedition; DATE/TIME; ELEVATION; Gear; GEOTRACES; Global marine biogeochemical cycles of trace elements and their isotopes; JGOFS; Joint Global Ocean Flux Study; Journal/report title; LATITUDE; LONGITUDE; Multiple cruises/expeditions; Ocean; Ocean and sea region; Period; POC flux; Project; Reference of data; Thorium-234, dissolved; Thorium-234, particulate; Thorium-234, total; Uniform resource locator/link to reference; Uranium-238; Vessel; Year of publication
    Type: Dataset
    Format: text/tab-separated-values, 4056 data points
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  • 4
    Publication Date: 2024-07-06
    Description: Thismia is a mycoheterotrophic genus in the family Thismiaceae. We report a new family record for Andaman and Nicobar Islands and a new species for India. A detailed description along with conservation assessment, colour photos, distribution map, and key to the species from India are provided.
    Keywords: Andaman Islands ; new record ; new species ; Rodwaya ; Thismia ; Thismiaceae
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 5
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    Unknown
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 63, pp. 140-143
    Publication Date: 2024-07-06
    Description: A new species of hairy tree fern (Dicksoniaceae - Cyatheales) is described and illustrated: Dicksonia utteridgei from stunted ridge forest in central New Guinea. The species is the only one in the genus with a combination of fully pinnate to bipinnate-pinnatifid pinnules and bristly spreading petiole hairs.
    Keywords: biogeography ; Dicksonia ; endemic ; New Guinea ; tree ferns
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 6
    Publication Date: 2024-07-06
    Keywords: chimera ; coexistence ; competition ; Curaçao ; invasive ; peripheral contact ; semisubmersible platform ; southern Caribbean
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 7
    Publication Date: 2024-07-06
    Description: In response to the ongoing global extinction, conservationists must prioritize future conservation investments to ensure that such measures are biologically effective and economically viable. To propose an effective conservation plan for Orthoptera assemblages on Cyprus Island, we introduce the Standardized Conservation Index (StCI), a biodiversity index accounting for the conservation value (ci), presence, dispersal ability, endemism and conservation status of a species. We evaluated the effect of eleven environmental variables on StCI, ci, species richness and the Shannon–Wiener diversity index, using linear and generalized linear models. Species and environmental data were collected in 60 localities that were placed along four elevational zones and included seven habitat types. Our results revealed the importance of rural mosaics and forests for the conservation of Orthoptera. The Shannon–Wiener diversity index failed to show the importance of high-altitude forests. The Orthoptera species diversity was favored by flower heads and the soil humidity, while rock cover and high shrubs had a positive and negative effect, respectively, on the StCI and ci values. Our results underline the value of StCI in complementing traditional diversity indices, as a scale-independent index that can be used for different taxa to prioritize sites of conservation concern.
    Keywords: assessment ; biodiversity index ; Cyprus ; grasshoppers ; insects ; prioritization
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 8
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    Unknown
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 63 no. 2, pp. 157-166
    Publication Date: 2024-07-06
    Description: Timor-Leste is one of the world’s newest nations, but the island of Timor has a long history of human habitation and land use which has played a significant role in shaping the 15 current vegetation and flora. Movement of people, plants and materials has seen the introduction of hundreds of plants to Timor from foreign lands, many of which have established naturalised populations, with some exerting detrimental impacts on Timorese agriculture, the environment and livelihoods. Plant health surveys conducted by Timorese and Australian biosecurity agencies have enabled compilation of an inventory of more than 20 500 naturalised and pest plant species based largely on recent field collections (now lodged in herbaria) supplemented by observational and literature records. The composition of the naturalised flora in terms of plant family and life form is described and the origin status of introduced plant species is referenced and summarised by continental region and likely mode of introduction.
    Keywords: Timor-Leste ; naturalised ; weeds ; introduced ; flora ; origin
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
    Format: application/octet-stream
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  • 9
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    Unknown
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 63, pp. 268-278
    Publication Date: 2024-07-06
    Keywords: biogeography ; Indonesia ; Mindanao ; New Guinea ; Philippines ; Sulawesi ; taxonomy ; tree ferns
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 10
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    Unknown
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 63, pp. 167-198
    Publication Date: 2024-07-06
    Description: Over two centuries of taxonomic studies on the species rich genus Phyllanthus have culminated in a broad and complicated classification with many subgenera and (sub)sections. Past taxonomic work has only focused on local revisions, mostly because of the size of the genus. In this study we aim to summarize most of the taxonomic work in a list containing the infrageneric delimitations of Phyllanthus. This work will serve as a reference, placing most currently recognized species in subgenera and if possible, in sections for further study. Here we recognize 880 species of Phyllanthus, classified in 18 subgenera, 70 sections and 14 subsections. A few taxonomic changes are necessary to reconcile published phylogenetic data with the current classification. Subsections Callidisci and Odontadenii are raised to sectional rank, while section Eleutherogynium and section Physoglochidion are reduced to subsections and P. oxycarpus is transferred to the genus Glochidion. A provisional key for the subgeneric classification of Phyllanthus is provided.
    Keywords: infrageneric taxonomy ; pantropical ; paraphyletic ; Phyllanthaceae ; Phyllanthus
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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