ALBERT

Description: An influence of solar irradiance variations on Earth’s surface climate has been repeatedly suggested, based on correlations between solar variability and meteorological variables1. Specifically, weaker westerly winds have been observed in winters with a less active sun, for example at the minimum phase of the 11-year sunspot cycle2, 3, 4. With some possible exceptions5, 6, it has proved difficult for climate models to consistently reproduce this signal7, 8. Spectral Irradiance Monitor satellite measurements indicate that variations in solar ultraviolet irradiance may be larger than previously thought9. Here we drive an ocean–atmosphere climate model with ultraviolet irradiance variations based on these observations. We find that the model responds to the solar minimum with patterns in surface pressure and temperature that resemble the negative phase of the North Atlantic or Arctic Oscillation, of similar magnitude to observations. In our model, the anomalies descend through the depth of the extratropical winter atmosphere. If the updated measurements of solar ultraviolet irradiance are correct, low solar activity, as observed during recent years, drives cold winters in northern Europe and the United States, and mild winters over southern Europe and Canada, with little direct change in globally averaged temperature. Given the quasiregularity of the 11-year solar cycle, our findings may help improve decadal climate predictions for highly populated extratropical regions

Description: The anaerobic oxidation of methane (AOM) with sulphate, an area currently generating great interest in microbiology, is accomplished by consortia of methanotrophic archaea (ANME) and sulphate-reducing bacteria1, 2. The enzyme activating methane in methanotrophic archaea has tentatively been identified as a homologue of methyl-coenzyme M reductase (MCR) that catalyses the methane-forming step in methanogenic archaea3, 4. Here we report an X-ray structure of the 280 kDa heterohexameric ANME-1 MCR complex. It was crystallized uniquely from a protein ensemble purified from consortia of microorganisms collected with a submersible from a Black Sea mat catalysing AOM with sulphate4. Crystals grown from the heterogeneous sample diffract to 2.1 Å resolution and consist of a single ANME-1 MCR population, demonstrating the strong selective power of crystallization. The structure revealed ANME-1 MCR in complex with coenzyme M and coenzyme B, indicating the same substrates for MCR from methanotrophic and methanogenic archaea. Differences between the highly similar structures of ANME-1 MCR and methanogenic MCR include a F430 modification, a cysteine-rich patch and an altered post-translational amino acid modification pattern, which may tune the enzymes for their functions in different biological contexts.

Description: Biological N2 fixation is an important part of the marine nitrogen cycle as it provides a source of new nitrogen that can support biological carbon export and sequestration. Research in the past decade has focused on determining the patterns of distribution and abundance of diazotrophs, defining the environmental features leading to these patterns and characterizing the factors that constrain marine N2 fixation overall. In this Review, we describe how variations in the deposition of iron from dust to different ocean basins affects the limiting nutrient for N2 fixation and the distribution of different diazotrophic species. However, many questions remain about marine N2 fixation, including the role of temperature, fixed nitrogen species, CO2 and physical forcing in controlling N2 fixation, as well as the potential for heterotrophic N2 fixation.

Description: The Pacific sector of Antarctica, including both the Antarctic Peninsula and continental West Antarctica, has experienced substantial warming in the past 30 years. An increase in the circumpolar westerlies, owing in part to the decline in stratospheric ozone concentrations since the late 1970s, may account for warming trends in the peninsula region in austral summer and autumn. The more widespread warming in continental West Antarctica (Ellsworth Land and Marie Byrd Land) occurs primarily in austral winter and spring, and remains unexplained. Here we use observations of Antarctic surface temperature and global sea surface temperature, and atmospheric circulation data to show that recent warming in continental West Antarctica is linked to sea surface temperature changes in the tropical Pacific. Over the past 30 years, anomalous sea surface temperatures in the central tropical Pacific have generated an atmospheric Rossby wave response that influences atmospheric circulation over the Amundsen Sea, causing increased advection of warm air to the Antarctic continent. General circulation model experiments show that the central tropical Pacific is a critical region for producing the observed high latitude response. We conclude that, by affecting the atmospheric circulation at high southern latitudes, increasing tropical sea surface temperatures may account for West Antarctic warming through most of the twentieth century.

Description: Climate warming at the end of the last glaciation caused ice caps on Icelandic volcanoes to retreat. Removal of surface ice load is thought to have decreased pressures in the underlying mantle, triggering decompression melting, enhanced magma generation and increased volcanic activity1–3. Present-day climate change could have the same effect, although there may be a time lag of hundreds of years between magma generation and eruption4,5. However, in addition to increased magma generation, pressure changes associated with ice retreat should also alter the capacity for storing magma within the crust. Here we use a numerical model to evaluate the effect of the current decrease in ice load on magma storage in the crust at the Kverkfjöll volcanic system, located partially beneath Iceland’s largest ice cap. We compare the model results with radar and global positioning system measurements of surface displacement and changes in crustal stress between 2007 and 2008, during the intrusion of a deep dyke at Upptyppingar. We find that although the main component of stress recorded during dyke intrusion relates to plate extension, another component of stress is consistent with the stress field caused by the retreating ice cap. We conclude that the retreating ice cap led to enhanced capture of magma within the crust. We suggest that ice-cap retreat can promote magma storage, rather than eruption, at least in the short term.

Description: There have been decades, such as 2000–2009, when the observed globally averaged surface-temperature time series shows little increase or even a slightly negative trend1 (a hiatus period). However, the observed energy imbalance at the top-of-atmosphere for this recent decade indicates that a net energy flux into the climate system of about 1 W m−2 (refs 2, 3) should be producing warming somewhere in the system4,5. Here we analyse twenty-first-century climate-model simulations that maintain a consistent radiative imbalance at the top-of-atmosphere of about 1 W m−2 as observed for the past decade. Eight decades with a slightly negative global mean surface-temperature trend show that the ocean above 300 m takes up significantly less heat whereas the ocean below 300 m takes up significantly more, compared with non-hiatus decades. The model provides a plausible depiction of processes in the climate system causing the hiatus periods, and indicates that a hiatus period is a relatively common climate phenomenon and may be linked to La Niña-like conditions.

Description: The fields of immunology, microbiology, nutrition and metabolism are rapidly converging. Here we expand on a diet-microbiota model as the basis for the greater incidence of asthma and autoimmunity in developed countries.

Description: Hydrothermal vents emit sulphur and metals to the ocean1. Particular attention has been paid to hydrothermal fluxes of iron2–4, a limiting micronutrient of marine primary production5. Vent-derived ironwas previously thought to rapidly oxidize and precipitate around vents6. However, organic matter can bind to and stabilize dissolved and particulate iron in hydrothermal plumes7–9, facilitating its dispersion into the open ocean10. Here, we report measurements of the chemical speciation of sulphide and iron in high-temperature fluids emanating from vents in the East Pacific Rise and the Eastern Lau Spreading Center. We show that pyrite nanoparticles—composed of iron and sulphur—account for up to 10% of the filterable iron (less than 200nm in size) in these fluids. We suggest that these particles form before the discharge of the vent fluid. We estimate that pyrite nanoparticles sink more slowly than larger plume particles, and are more resistant to oxidation than dissolved Fe(II) and FeS.We suggest that the discharge of iron in the form of pyrite nanoparticles increases the probability that vent-derived iron will be transported over long distances in the deep ocean.

Description: As part of the Bonus-GoodHope (BGH) campaign, 15N-labelled nitrate, ammonium and urea uptake measurements were made along the BGH transect from Cape Town to ~60° S in late austral summer, 2008. Our results are categorised according to distinct hydrographic regions defined by oceanic fronts and open ocean zones. High regenerated nitrate uptake rate in the oligotrophic Subtropical Zone (STZ) resulted in low f-ratios (f = 0.2) with nitrogen uptake being dominated by ρurea, which contributed up to 70 % of total nitrogen uptake. Size fractionated chlorophyll data showed that the greatest contribution (〉50 %) of picophytoplankton (〈2 μm) were found in the STZ, consistent with a community based on regenerated production. The Subantarctic Zone (SAZ) showed the greatest total integrated nitrogen uptake (10.3 mmol m−2 d−1), mainly due to enhanced nutrient supply within an anticyclonic eddy observed in this region. A decrease in the contribution of smaller size classes to the phytoplankton community was observed with increasing latitude, concurrent with a decrease in the contribution of regenerated production. Higher f-ratios observed in the SAZ (f = 0.49), Polar Frontal Zone (f= 0.41) and Antarctic Zone (f = 0.45) relative to the STZ (f = 0.24), indicate a higher contribution of NO3−-uptake relative to total nitrogen and potentially higher export production. High ambient regenerated nutrient concentrations are indicative of active regeneration processes throughout the transect and ascribed to late summer season sampling. Higher depth integrated uptake rates also correspond with higher surface iron concentrations. No clear correlation was observed between carbon export estimates derived from new production and 234Th flux. In addition, export derived from 15N estimates were 2–20 times greater than those based on 234Th flux. Variability in the magnitude of export is likely due to intrinsically different methods, compounded by differences in integration time scales for the two proxies of carbon export.

Description: Seawater concentrations of the four brominated trace gases dibromomethane (CH2Br2), bromodichloromethane (CHBrCl2), dibromochloromethane (CHBr2Cl) and bromoform (CHBr3) were measured at different depths of the water column in the Iberian upwelling off Portugal during summer 2007. Bromocarbon concentrations showed elevated values in recently upwelled and aged upwelled waters (mean values of 30 pmol L−1 for CHBr3), while values in the open ocean were significantly lower (7.4 pmol L−1 for CHBr3). Correlations with biological variables and marker pigments indicated that phytoplankton could be identified as a weak bromocarbon source in the open ocean. In upwelled water masses along the coast, halocarbons were not correlated to Chl-a, indicating an external source, overlapping the possible internal production by phytoplankton. We showed that the tidal frequency had a significant influence on halocarbon concentrations in the upwelling and we linked those findings to a strong intertidal coastal source, as well as to a transport of those halocarbon enriched coastal waters by westward surface upwelling currents. Coastal sources and transport can be accounted for maximum values of up to 185.1 pmol L−1 CHBr3 in the upwelling. Comparison with other productive marine areas revealed that the Iberian upwelling had stronger halocarbon sources than the phytoplankton dominated sources in the Mauritanian upwelling. However, the concentrations off the Iberian Peninsula were still much lower than those of coastal macroalgal influenced waters or those of polar regions dominated by cold water adapted diatoms

Description: A steady state box model was developed to estimate the methane input into the Black Sea water column at various water depths. Our model results reveal a total input of methane of 4.7 Tg yr−1. The model predicts that the input of methane is largest at water depths between 600 and 700 m (7% of the total input), suggesting that the dissociation of methane gas hydrates at water depths equivalent to their upper stability limit may represent an important source of methane into the water column. In addition we discuss the effects of massive short-term methane inputs (e.g. through eruptions of deep-water mud volcanoes or submarine landslides at intermediate water depths) on the water column methane distribution and the resulting methane emission to the atmosphere. Our non-steady state simulations predict that these inputs will be effectively buffered by intense microbial methane consumption and that the upward flux of methane is strongly hampered by the pronounced density stratification of the Black Sea water column. For instance, an assumed input of methane of 179 Tg CH4 d−1 (equivalent to the amount of methane released by 1000 mud volcano eruptions) at a water depth of 700 m will only marginally influence the sea/air methane flux increasing it by only 3%.

Description: In this study, we present a single-cell genomics approach for the functional characterization of the candidate phylum Poribacteria, members of which are nearly exclusively found in marine sponges. The microbial consortia of the Mediterranean sponge Aplysina aerophoba were singularized by fluorescence-activated cell sorting, and individual microbial cells were subjected to phi29 polymerase-mediated 'whole-genome amplification'. Pyrosequencing of a single amplified genome (SAG) derived from a member of the Poribacteria resulted in nearly 1.6 Mb of genomic information distributed among 554 contigs analyzed in this study. Approximately two-third of the poribacterial genome was sequenced. Our findings shed light on the functional properties and lifestyle of a possibly ancient bacterial symbiont of marine sponges. The Poribacteria are mixotrophic bacteria with autotrophic CO(2)-fixation capacities through the Wood-Ljungdahl pathway. The cell wall is of Gram-negative origin. The Poribacteria produce at least two polyketide synthases (PKSs), one of which is the sponge-specific Sup-type PKS. Several putative symbiosis factors such as adhesins (bacterial Ig-like domains, lamininin G domain proteins), adhesin-related proteins (ankyrin, fibronectin type III) and tetratrico peptide repeat domain-encoding proteins were identified, which might be involved in mediating sponge-microbe interactions. The discovery of genes coding for 24-isopropyl steroids implies that certain fossil biomarkers used to date the origins of metazoan life on earth may possibly be of poribacterial origin. Single-cell genomic approaches, such as those shown herein, contribute to a better understanding of beneficial microbial consortia, of which most members are, because of the lack of cultivation, inaccessible by conventional techniques.

Description: Salinity is a major factor controlling the distribution of biota in aquatic systems, and most aquatic multicellular organisms are either adapted to life in saltwater or freshwater conditions. Consequently, the saltwater–freshwater mixing zones in coastal or estuarine areas are characterized by limited faunal and floral diversity. Although changes in diversity and decline in species richness in brackish waters is well documented in aquatic ecology, it is unknown to what extent this applies to bacterial communities. Here, we report a first detailed bacterial inventory from vertical profiles of 60 sampling stations distributed along the salinity gradient of the Baltic Sea, one of world's largest brackish water environments, generated using 454 pyrosequencing of partial (400 bp) 16S rRNA genes. Within the salinity gradient, bacterial community composition altered at broad and finer-scale phylogenetic levels. Analogous to faunal communities within brackish conditions, we identified a bacterial brackish water community comprising a diverse combination of freshwater and marine groups, along with populations unique to this environment. As water residence times in the Baltic Sea exceed 3 years, the observed bacterial community cannot be the result of mixing of fresh water and saltwater, but our study represents the first detailed description of an autochthonous brackish microbiome. In contrast to the decline in the diversity of multicellular organisms, reduced bacterial diversity at brackish conditions could not be established. It is possible that the rapid adaptation rate of bacteria has enabled a variety of lineages to fill what for higher organisms remains a challenging and relatively unoccupied ecological niche.

Description: The Denmark Strait overflow water is the largest dense water plume from the Nordic seas to feed the lower limb of the Atlantic Meridional Overturning Circulation. Its primary source is commonly thought to be the East Greenland Current. However, the recent discovery of the North Icelandic Jet—a deep-reaching current that flows along the continental slope of Iceland—has called this view into question. Here we present high-resolution measurements of hydrography and velocity north of Iceland, taken during two shipboard surveys in October 2008 and August 2009. We find that the North Icelandic Jet advects overflow water into the Denmark Strait and constitutes a pathway that is distinct from the East Greenland Current. We estimate that the jet supplies about half of the total overflow transport, and infer that it is the primary source of the densest overflow water. Simulations with an ocean general circulation model suggest that the import of warm, salty water from the North Icelandic Irminger Current and water-mass transformation in the interior Iceland Sea are critical to the formation of the jet. We surmise that the timescale for the renewal of the deepest water in the meridional overturning cell, and its sensitivity to changes in climate, could be different than presently envisaged.

Description: The trace metal iron (Fe) is now routinely included in state-of-the-art ocean general circulation and biogeochemistry models (OGCBMs) because of its key role as a limiting nutrient in regions of the world ocean important for carbon cycling and air-sea CO2 exchange. However, the complexities of the seawater Fe cycle, which impact its speciation and bioavailability, are simplified in such OGCBMs due to gaps in understanding and to avoid high computational costs. In a similar fashion to inorganic carbon speciation, we outline a means by which the complex speciation of Fe can be included in global OGCBMs in a reasonably cost-effective manner. We construct an Fe speciation model based on hypothesised relationships between rate constants and environmental variables (temperature, light, oxygen, pH, salinity) and assumptions regarding the binding strengths of Fe complexing organic ligands and test hypotheses regarding their distributions. As a result, we find that the global distribution of different Fe species is tightly controlled by spatio-temporal environmental variability and the distribution of Fe binding ligands. Impacts on bioavailable Fe are highly sensitive to assumptions regarding which Fe species are bioavailable and how those species vary in space and time. When forced by representations of future ocean circulation and climate we find large changes to the speciation of Fe governed by pH mediated changes to redox kinetics. We speculate that these changes may exert selective pressure on phytoplankton Fe uptake strategies in the future ocean. In future work, more information on the sources and sinks of ocean Fe ligands, their bioavailability, the cycling of colloidal Fe species and kinetics of Fe-surface coordination reactions would be invaluable. We hope our modeling approach can provide a means by which new observations of Fe speciation can be tested against hypotheses of the processes present in governing the ocean Fe cycle in an integrated sense

Description: Extracting minerals from sea-floor vents should not go ahead without a coherent conservation framework, argues Cindy Lee Van Dover.

Description: Due to their aragonitic shell thecosome pteropods may be particularly vulnerable to ocean acidification driven by anthropogenic CO2 emissions. This applies specifically to species inhabiting Arctic surface waters that are projected to become locally undersaturated with respect to aragonite as early as 2016. This study investigated the effects of rising pCO2 partial pressures and elevated temperature on pre-winter juveniles of the polar pteropod Limacina helicina. After a 29 days experiment in September/October 2009 at three different temperatures and under pCO2 scenarios projected for this century, mortality, shell degradation, shell diameter and shell increment were investigated. Temperature and pCO2 had a significant effect on mortality, but temperature was the overriding factor. Shell diameter, shell increment and shell degradation were significantly impacted by pCO2 but not by temperature. Mortality was 46% higher at 8 °C compared to 3 °C (in situ), and 14% higher at 1100 μatm CO2 as compared to 230 μatm CO2. Shell diameter and increment were reduced by 10% and 12% at 1100 μatm CO2 as compared to 230 μatm CO2, respectively, and shell degradation was 41% higher at elevated compared to ambient pCO2 partial pressures. We conclude that pre-winter juveniles will be negatively affected by both rising temperature and pCO2 which may result in a possible abundance decline of the overwintering population, the basis for next year's reproduction.

Description: Ocean acidification and associated shifts in carbonate chemistry speciation induced by increasing levels of atmospheric carbon dioxide (CO2) have the potential to impact marine biota in various ways. The process of biogenic calcification, for instance, is usually shown to be negatively affected. In coccolithophores, an important group of pelagic calcifiers, changes in cellular calcification rates in response to changing ocean carbonate chemistry appear to differ among species. By applying a wider CO2 range we show that a species previously reported insensitive to seawater acidification, Coccolithus braarudii, responds both in terms of calcification and photosynthesis, although at higher levels of CO2. Thus, observed differences between species seem to be related to individual sensitivities while the underlying mechanisms could be the same. On this basis we develop a conceptual model of coccolithophorid calcification and photosynthesis in response to CO2-induced changes in seawater carbonate chemistry speciation.

Description: Fluids entering the subduction zone play a key role in the subduction process. They cause changes in the dynamics and thermal structure of the subduction zone1, and trigger earthquakes when released from the subducting plate during metamorphism. Fluids are delivered to the subduction zone by the oceanic crust and also enter as the oceanic plate bends downwards at the plate boundary. However, the amount of fluids entering subduction zones is not matched by that leaving through volcanic emissions4 or transfer to the deep mantle, implying possible storage of fluids in the crust. Here we use magnetotelluric data to map the entire hydration and dehydration cycle of the Costa Rican subduction zone to 120 km depth. Along the incoming plate bend, we detect a conductivity anomaly that we interpret as sea water penetrating down extensional faults and cracks into the upper mantle. Along the subducting plate interface we document the dehydration of sediments, the crust and mantle. We identify an accumulation of fluids at ~20–30 km depth at a distance of 30 km seaward from the volcanic arc. Comparison with other subduction zones5–14 indicates that such fluid accumulation is a global phenomenon. Although we are unable to test whether these fluid reservoirs grow with time, we suggest that they can account for some of the missing outflow of fluid at subduction zones.

Description: Lavas erupted within plate interiors above upwelling mantle plumes have chemical signatures that are distinct from midocean ridge lavas. When a plume interacts with a mid-ocean ridge, the compositions of both their lavas changes, but there is no consensus as to how this interaction occurs1–3. For the past 15 Myr, the Pacific–Antarctic mid-ocean ridge has been approaching the Foundation hotspot4 and erupted lavas have formed seamounts. Here we analyse the noble gas isotope and trace element signature of lava samples collected from the seamounts. We find that both intraplate and on-axis lavas have noble gas isotope signatures consistent with the contribution from a primitive plume source. In contrast, nearaxis lavas show no primitive noble gas isotope signatures, but are enriched in strontium and lead, indicative of subducted former oceanic lower crust melting within the plume source5–7. We propose that, in a near-ridge setting, primitive, plumesourced magmas formed deep in the plume are preferentially channelled to and erupted at the ridge-axis. The remaining residue continues to rise and melt, forming the near-axis seamounts. With the deep melts removed, the geochemical signature of subduction contained within the residue becomes apparent. Lavas with strontium and lead enrichments are found worldwide where plumes meet mid-ocean ridges6–8, suggesting that subducted lower crust is an important but previously unrecognised plume component.

Description: The oxygen isotopic composition and Mg/Ca ratios in the skeletons of long-lived coralline algae record ambient seawater temperature over time. Similarly, the carbon isotopic composition in the skeletons record δ13C values of ambient seawater dissolved inorganic carbon. Here, we measured δ13C in the coralline alga Clathromorphum nereostratum to test the feasibility of reconstructing the intrusion of anthropogenic CO2 into the northern North Pacific Ocean and Bering Sea. The δ13C was measured in the high Mg-calcite skeleton of three C. nereostratum specimens from two islands 500 km apart in the Aleutian archipelago. In the records spanning 1887 to 2003, the average decadal rate of decline in δ13C values increased from 0.03‰ yr−1 in the 1960s to 0.095‰ yr−1 in the 1990s, which was higher than expected due to solely the δ13C-Suess effect. Deeper water in this region exhibits higher concentrations of CO2 and low δ13C values. Transport of deeper water into surface water (i.e., upwelling) increases when the Aleutian Low is intensified. We hypothesized that the acceleration of the δ13C decline may result from increased upwelling from the 1960s to 1990s, which in turn was driven by increased intensity of the Aleutian Low. Detrended δ13C records also varied on 4–7 year and bidecadal timescales supporting an atmospheric teleconnection of tropical climate patterns to the northern North Pacific Ocean and Bering Sea manifested as changes in upwelling.

Description: Experiments have shown that ocean acidification due to rising atmospheric carbon dioxide concentrations has deleterious effects on the performance of many marine organisms(1-4). However, few empirical or modelling studies have addressed the long-term consequences of ocean acidification for marine ecosystems(5-7). Here we show that as pH declines from 8.1 to 7.8 (the change expected if atmospheric carbon dioxide concentrations increase from 390 to 750 ppm, consistent with some scenarios for the end of this century) some organisms benefit, but many more lose out. We investigated coral reefs, seagrasses and sediments that are acclimatized to low pH at three cool and shallow volcanic carbon dioxide seeps in Papua New Guinea. At reduced pH, we observed reductions in coral diversity, recruitment and abundances of structurally complex framework builders, and shifts in competitive interactions between taxa. However, coral cover remained constant between pH 8.1 and similar to 7.8, because massive Porites corals established dominance over structural corals, despite low rates of calcification. Reef development ceased below pH 7.7. Our empirical data from this unique field setting confirm model predictions that ocean acidification, together with temperature stress, will probably lead to severely reduced diversity, structural complexity and resilience Of Indo-Pacific coral reefs within this century

Description: A significant decrease of dissolved iron (DFe) concentration has been observed after dust addition into mesocosms during the DUst experiment in a low Nutrient low chlorophyll Ecosystem (DUNE), carried out in the summer of 2008. Due to low biological productivity at the experiment site, biological consumption of iron can not explain the magnitude of DFe decrease. To understand processes regulating the observed DFe variation, we simulated the experiment using a one-dimensional model of the Fe biogeochemical cycle, coupled with a simple ecosystem model. Different size classes of particles and particle aggregation are taken into account to describe the particle dynamics. DFe concentration is regulated in the model by dissolution from dust particles and adsorption onto particle surfaces, biological uptake, and photochemical mobilisation of particulate iron. The model reproduces the observed DFe decrease after dust addition well. This is essentially explained by particle adsorption and particle aggregation that produces a high export within the first 24 h. The estimated particle adsorption rates range between the measured adsorption rates of soluble iron and those of colloidal iron, indicating both processes controlling the DFe removal during the experiment. A dissolution timescale of 3 days is used in the model, instead of an instantaneous dissolution, underlining the importance of dissolution kinetics on the short-term impact of dust deposition on seawater DFe. Sensitivity studies reveal that initial DFe concentration before dust addition was crucial for the net impact of dust addition on DFe during the DUNE experiment. Based on the balance between abiotic sinks and sources of DFe, a critical DFe concentration has been defined, above which dust deposition acts as a net sink of DFe, rather than a source. Taking into account the role of excess iron binding ligands and biotic processes, the critical DFe concentration might be applied to explain the short-term variability of DFe after natural dust deposition in various different ocean regions.

Description: The isotopic composition of volatile organic compounds (VOCs) can provide valuable information on their sources and fate not deducible from mixing ratios alone. In particular the reported carbon stable isotope ratios of chloromethane and bromomethane from different sources cover a δ13C-range of almost 100‰ making isotope ratios a very promising tool for studying the biogeochemistry of these compounds. So far, the determination of the isotopic composition of C1 and C2 halocarbons others than chloromethane is hampered by their low mixing ratios. In order to determine the carbon isotopic composition of C1 and C2 halocarbons with mixing ratios as low as 1 pptv (i) a field suitable cryogenic high volume sampling system and (ii) a chromatographic set up for processing these samples have been developed and validated. The sampling system was tested at two different sampling sites, an urban and a coastal location in Northern Germany. The average δ13C-values for bromomethane at the urban site were −42.9 ± 1.1‰ and agreed well with previously published results. But at the coastal site bromomethane was substantially enriched in 13C by almost 10‰. Less pronounced differences were observed for chlorodifluoromethane, 1,1,1-trichloroethane and chloromethane. We suggest that these differences are related to the turnover of these compounds in ocean surface waters. Furthermore we report first carbon isotope ratios for iodomethane (−40.4‰ to −79.8‰), bromoform (−13.8‰ to 22.9‰), and other halocarbons.

Description: The impact of solar activity on climate has been debated heatedly. Simulations with a climate model using new observations of solar variability suggest a substantial influence of the Sun on the winter climate in the Northern Hemisphere.

Description: Marine biogenic carbonates formed by invertebrates (e.g. corals and mollusks) represent complex composites of one or more mineral phases and organic molecules. This complexity ranges from the macroscopic structures observed with the naked eye down to sub micrometric structures only revealed by micro analytical techniques. Understanding to what extent and how organisms can control the formation of these structures requires that the mineral and organic phases can be identified and their spatial distribution related. Here we demonstrate the capability of confocal Raman microscopy applied to cross sections of a shell of Nerita undata to describe the distribution of calcite and aragonite including their crystallographic orientation with high lateral resolution (~300 nm). Moreover, spatial distribution of functional groups of organic compounds can be simultaneously acquired, allowing to specifically relate them to the observed microstructures. The data presented in this case study highlights the possible new contributions of this method to the description of modalities of Nerita undata shell formation, and what could be expected of its application to other marine biogenic carbonates. Localization of areas of interest would also allow further investigations using more localized methods, such as TEM that would provide complementary information on the relation between organic molecules and crystal lattice.

Description: The Southern Ocean is thought to be one of the most energetic regions in the world’s oceans. As a result, it is a location of vigorous diapycnal mixing of heat, salt and biogeochemical properties1, 2, 3. At the same time, the Southern Ocean is poorly sampled, not least because of its harsh climate and remote location. Yet the spatial and temporal variation of diapycnal diffusivity in this region plays an important part in the large-scale ocean circulation and climate4, 5, 6. Here we use high-resolution hydrographic profiles from Argo floats in combination with the Iridium communications system to investigate diapycnal mixing in the Southern Ocean. We find that the spatial distribution of turbulent diapycnal mixing in the Southern Ocean at depths between 300 and 1,800 m is controlled by the topography, by means of its interaction with the Antarctic Circumpolar Current. The seasonal variation of this mixing can largely be attributed to the seasonal cycle of surface wind stress and is more pronounced in the upper ocean over flat topography. We suggest that additional high-resolution profiles from Argo floats will serve to advance our understanding of mixing processes in the global ocean interior.

Description: The origin of the Christmas Island Seamount Province in the northeast Indian Ocean is enigmatic. The seamounts do not form the narrow, linear and continuous trail of volcanoes that would be expected if they had formed above a mantle plume1, 2. Volcanism above a fracture in the lithosphere3 is also unlikely, because the fractures trend orthogonally with respect to the east–west trend of the Christmas Island chain. Here we combine 40Ar/39Ar age, Sr, Nd, Hf and high-precision Pb isotope analyses of volcanic rocks from the province with plate tectonic reconstructions. We find that the seamounts are 47–136 million years old, decrease in age from east to west and are consistently 0–25 million years younger than the underlying oceanic crust, consistent with formation near a mid-ocean ridge. The seamounts also exhibit an enriched geochemical signal, indicating that recycled continental lithosphere was present in their source. Plate tectonic reconstructions show that the seamount province formed at the position where West Burma began separating from Australia and India, forming a new mid-ocean ridge. We propose that the seamounts formed through shallow recycling of delaminated continental lithosphere entrained in mantle that was passively upwelling beneath the mid-ocean ridge. We conclude that shallow recycling of continental lithosphere at mid-ocean ridges could be an important mechanism for the formation of seamount provinces in young ocean basins.

Description: Even though first experiments for the characterization of the seafloor using marine electromagnetic (EM) methods were already carried out in the mid 1960’s, they have only played a minute role in marine academic investigation for several decades. Only in the past decade, the strongly increasing interest of oil companies for alternative investigation methods for marine oil and gas exploration brought the use of EM methods into the focus of attention. Traditional founders of marine EM methods (Scripps, U of Toronto, U of Southampton) are now accompanied by newly established commercial (e.g. Exxon, AOA Geophysics, OHM surveys, EMGS, Statoil) as well as academic groups. The marine EM group at the IFM GEOMAR, which was established in 2006, initially focused on the development and testing of EM receivers (RX) for magnetotelluric (MT) measurements. Successful measurements were taken during a cruise to the Costa Rican trench (2007/08, see Worzewski, this session). However, these measurements revealed some problems with this first generation of instruments (e.g. stability of stations on the ocean-floor). A subsequent, much improved generation of MT receivers developed in 2008 was successfully deployed during cruises to the Alboran Sea (2009) and the Cyprus Arc (2010) and is currently used in investigations of the Walvis Ridge (Namibia, 2011) and the New Zealand Subduction Zone (2011). For a RWE Dea funded project at the North Alex Mud Volcano (NAMV), a second line of development at the IFM-GEOMAR focused on development of controlled source electromagnetic (CSEM) equipment. For this first project, safety concerns (slop stability) as well as the comparatively small size of the investigated target ([ca.] 1km2) required a new approach to allow for a secure, high resolution CSEM experiment. For this type of experiment, the existing MT receivers were extended to include a high frequency CSEM mode (10kHz) for the electric fields. Additionally, a lightweight electric dipole transmitter (TX), which can be mounted on a small remotely operated underwater vehicle (ROV) was developed. In a 3D-style tomographic experiment (Nov. 2008), ten receivers were deployed over the surface of NAMV at a total of 16 receiver locations and in three successful dives with a Cherokee ROV (Ghent University, Belgium), the transmitter was deployed at a total of 80 locations. Since both RXs and TX were stationary during measurements, a small dipole moment of 200Am (20A current, 10m dipole length) was sufficient to collect transient data up to RX-TX distances of more than 1km. Generally, navigational inaccuracy limits the accuracy and thus also the resolution of CSEM measurements, which is mainly due to the constantly moving sources used in most commercial systems. The good quality of data recorded during the initial experiment at the NAMV raises the question, if this issue may for some types of CSEM experiments may be remedied by using stationary transmitters instead of flying sources. During the upcoming experiment in New Zealand (April 2011), we will find some answers to this question with our new CSEM transmitter system, which has a higher dipole moment ([ca.] 1kAm) and the capability to perform the navigation between TX and the RXs directly on the ocean floor.

Description: Magnetotelluric (MT) method determines a frequency dependent impedance tensor using the spectra of associated time-varying horizontal electric and magnetic fields measured at the Earth’s surface. In this abstract, we present a dynamic time series analysis method dealing the non-stationary MT data to infer the impedance tensor. Most current methods to determine the spectra use Fourier transform based procedure and, therefore, assume that the signals are stationary over the record length. We introduce a new method for dealing with non-stationarity of the MT time series based upon empirical mode decomposition (EMD) method, a dynamic time series analysis method. Using EMD complicated data sets can be decomposed into a finite and small number of "intrinsic mode functions" (IMFs), which are mono-component signals and allow the calculation of physical meaningful instantaneous frequencies. EMD has no bias due to non-stationary of geomagnetic time series, since the IMFs are based entirely on signal characteristics and not on any given set of base functions such as sines and cosines in the Fourier transform or wavelets in the Wavelet transform. We use the EMD method to decompose MT data into IMFs and calculate the instantaneous frequencies and spectra to determine the impedance tensor. The method is tested in synthetic and real marine MT data sets, the obtained estimate results are reliable compared to frequently-used BIRRP processing method. Furthermore, new method has the possibility of noise visualization and filtering, which is especially important in marine applications, where noise free time segments maybe short.

Description: Autonomous sensors are required for a comprehensive documentation of the changes in the marine carbon system and thus to differentiate between its natural variability and anthropogenic impacts. Spectrophotometric determination of pH – a key variable of the seawater carbon system – is particularly suited to achieve precise and drift-free measurements. However, available spectrophotometric instruments are not suitable for integration into automated measurement systems (e.g. FerryBox) since they do not meet the major requirements of reliability, stability, robustness and moderate cost. Here we report on the development and testing of a~new indicator-based pH sensor that meets all of these requirements. This sensor can withstand the rough conditions during long-term deployments on ships of opportunity and is applicable to the open ocean as well as to coastal waters with a complex matrix and highly variable conditions. The sensor uses a high resolution CCD spectrometer as detector connected via optical fibers to a custom-made cuvette designed to reduce the impact of air bubbles. The sample temperature can be precisely adjusted (25 °C ± 0.006 °C) using computer-controlled power supplies and Peltier elements thus avoiding the widely used water bath. The overall setup achieves a measurement frequency of 1 min−1 with a precision of ±0.0007 pH units, an average offset of +0.0005 pH units to a reference system, and an offset of +0.0081 pH units to a certified standard buffer. Application of this sensor allows monitoring of seawater pH in autonomous underway systems, providing a key variable for characterization and understanding of the marine carbon system.

Description: Three new 22-membered macrolactone antibiotics, atacamycins A-C, were produced by Streptomyces sp. C38, a strain isolated from a hyper-arid soil collected from the Atacama Desert in the north of Chile. The metabolites were discovered in our HPLC-diode array screening and isolated from the mycelium by extraction and chromatographic purification steps. The structures were determined by mass spectrometry and NMR experiments. Atacamycins A, B and C exhibited moderate inhibitory activities against the enzyme phosphodiesterase (PDE-4B2), whereas atacamycin A showed a moderate antiproliferative activity against adeno carcinoma and breast carcinoma cells

Description: The Arabian Sea harbours one of the three major oxygen minimum zones (OMZs) in the world's oceans, and it alone is estimated to account for ~10–20 % of global oceanic nitrogen (N) loss. While actual rate measurements have been few, the consistently high accumulation of nitrite (NO2−) coinciding with suboxic conditions in the central-northeastern part of the Arabian Sea has led to the general belief that this is the region where active N-loss takes place. Most subsequent field studies on N-loss have thus been drawn almost exclusively to the central-NE. However, a recent study measured only low to undetectable N-loss activities in this region, compared to orders of magnitude higher rates measured towards the Omani Shelf where little NO2− accumulated (Jensen et al., 2011). In this paper, we further explore this discrepancy by comparing the NO2−-producing and consuming processes, and examining the relationship between the overall NO2− balance and active N-loss in the Arabian Sea. Based on a combination of 15N-incubation experiments, functional gene expression analyses, nutrient profiling and flux modeling, our results showed that NO2− accumulated in the central-NE Arabian Sea due to a net production via primarily active nitrate (NO3−) reduction and to a certain extent ammonia oxidation. Meanwhile, NO2− consumption via anammox, denitrification and dissimilatory nitrate/nitrite reduction to ammonium (NH4+) were hardly detectable in this region, though some loss to NO2− oxidation was predicted from modeled NO3− changes. No significant correlation was found between NO2− and N-loss rates (p〉0.05). This discrepancy between NO2− accumulation and lack of active N-loss in the central-NE Arabian Sea is best explained by the deficiency of labile organic matter that is directly needed for further NO2− reduction to N2O, N2 and NH4+, and indirectly for the remineralized NH4+ required by anammox. Altogether, our data do not support the long-held view that NO2− accumulation is a direct activity indicator of N-loss in the Arabian Sea or other OMZs. Instead, NO2− accumulation more likely corresponds to long-term integrated N-loss that has passed the prime of high and/or consistent in situ activities.

Description: The Maritime Aerosol Network (MAN) has been collecting data over the oceans since November 2006. Over 80 cruises were completed through early 2010 with deployments continuing. Measurement areas included various parts of the Atlantic Ocean, the Northern and Southern Pacific Ocean, the South Indian Ocean, the Southern Ocean, the Arctic Ocean and inland seas. MAN deploys Microtops hand-held sunphotometers and utilizes a calibration procedure and data processing traceable to AERONET. Data collection included areas that previously had no aerosol optical depth (AOD) coverage at all, particularly vast areas of the Southern Ocean. The MAN data archive provides a valuable resource for aerosol studies in maritime environments. In the current paper we present results of AOD measurements over the oceans, and make a comparison with satellite AOD retrievals and model simulations.

Description: Due to atmospheric accumulation of anthropogenic CO2 the partial pressure of carbon dioxide (pCO2) in surface seawater increases and the pH decreases. This process known as ocean acidification might have severe effects on marine organisms and ecosystems. The present study addresses the effect of ocean acidification on early developmental stages, the most sensitive stages in life history, of the Atlantic herring (Clupea harengus L.). Eggs of the Atlantic herring were fertilized and incubated in artificially acidified seawater (pCO2 1260, 1859, 2626, 2903, 4635 μatm) and a control treatment (pCO2 480 μatm) until the main hatch of herring larvae occurred. The development of the embryos was monitored daily and newly hatched larvae were sampled to analyze their morphometrics, and their condition by measuring the RNA/DNA ratios. Elevated pCO2 neither affected the embryogenesis nor the hatch rate. Furthermore the results showed no linear relationship between pCO2 and total length, dry weight, yolk sac area and otolith area of the newly hatched larvae. For pCO2 and RNA/DNA ratio, however, a significant negative linear relationship was found. The RNA concentration at hatching was reduced at higher pCO2 levels, which could lead to a decreased protein biosynthesis. The results indicate that an increased pCO2 can affect the metabolism of herring embryos negatively. Accordingly, further somatic growth of the larvae could be reduced. This can have consequences for the larval fish, since smaller and slow growing individuals have a lower survival potential due to lower feeding success and increased predation mortality. The regulatory mechanisms necessary to compensate for effects of hypercapnia could therefore lead to lower larval survival. Since the recruitment of fish seems to be determined during the early life stages, future research on the factors influencing these stages are of great importance in fisheries science.

Description: Fluids entering the subduction zone are a key factor in the subduction process. They determine the onset of melting, weakening and changes in the dynamics and thermal structure of subduction zones and trigger earthquakes when being released from the subducting plate in a series of metamorphic processes. However, the amount of water carried into the subduction zone and its distribution are not well constrained by existing data and are subject of vigorous current research in SFB574 (Volatiles and Fluids in Subduction Zones: Climate Feedback and Trigger Mechanisms for Natural Disasters). Electromagnetic methods like magnetotellurics have been used widely to recognize fluid release and melt production through enhanced electrical conductivities. Here we present an image of the hydration and dehydration cycle down to 120 km depth in one setting derived by an onshore-offshore transect of magnetotelluric soundings in Costa Rica. An electrically conductive zone in the incoming plate outer rise is associated with sea water penetrating down extensional faults and cracks into the upper mantle possibly causing serpentinization. Along the downward subducting plate distinct conductive anomalies identify fluids from dehydration of sediments, crust and mantle. A conductivity anomaly at a depth of approx. 12 km and at a distance of 65 km from the trench is associated with a first major dehydration reaction of minerally-bound water. This is of importance in the context of mid-slope fluid seeps which are thought to significantly contribute to the recycling of minerally-bound water. The position of the conductivity anomaly correlates with geochemical and seismic evidence stating that mid-slope fluids are originated at 〉=12 km depth before rising up through deep faults to the seeps. The conductivity anomaly is therefore associated with a fluid accumulation feeding the mid-slope seeps. Another fluid accumulation is revealed by a conductivity anomaly at 20-30 km depth and a distance of approximately 30 km seaward from the volcanic arc. This lower crustal fluid accumulation could likely be caused by trapping of fluids released due to de-serpentinization processes or due to other mineral dehydration processes. While we are at the moment not able to attribute one specific process causing the anomaly based on electromagnetic data alone, this feature is however of fundamental importance. A comparison with other electromagnetic studies from subduction zones around the world reveal that such a conductivity anomaly is a global feature suggesting the presence of a global fluid sink. Based on very simplified assumptions we are able derive rough estimates for the amount of water being stored in the overriding plate. Relating seismic evidence as well as petrological results collected in the multi-disciplinary study on the Costa Rican subduction zone we introduce budget estimations for the water cycle in the subduction zone.

Description: Ostreococcus is a marine picophytoeukaryote for which culture studies indicate there are 'high-light' and 'low-light' adapted ecotypes. Representatives of these ecotypes fall within two to three 18S ribosomal DNA (rDNA) clades for the former and one for the latter. However, clade distributions and relationships to this form of niche partitioning are unknown in nature. We developed two quantitative PCR primer-probe sets and enumerated the proposed ecotypes in the Pacific Ocean as well as the subtropical and tropical North Atlantic. Statistical differences in factors such as salinity, temperature and NO 3 indicated the ecophysiological parameters behind clade distributions are more complex than irradiance alone. Clade OII, containing the putatively low-light adapted strains, was detected at warm oligotrophic sites. In contrast, Clade OI, containing high-light adapted strains, was present in cooler mesotrophic and coastal waters. Maximal OI abundance (19 555±37 18S rDNA copies per ml) was detected in mesotrophic waters at 40 m depth, approaching the nutricline. OII was often more abundant at the deep chlorophyll maximum, when nutrient concentrations were significantly higher than at the surface (stratified euphotic zone waters). However, in mixed euphotic-zone water columns, relatively high numbers (for example, 891±107 18S rDNA copies per ml, Sargasso Sea, springtime) were detected at the surface. Both Clades OI and OII were found at multiple euphotic zone depths, but co-occurrence at the same geographical location appeared rare and was detected only in continental slope waters. In situ growth rate estimates using these primer-probes and better comprehension of physiology will enhance ecological understanding of Ostreococcus Clades OII and OI which appear to be oceanic and coastal clades, respectively. © 2011 International Society for Microbial Ecology. All rights reserved.

Description: Reluctance to deposit data is rife among researchers, despite broad agreement on the principle of data sharing. More and better information will reach hitherto empty archives, if professional support is given during data creation, not in a project's final phase.

Description: Joint inversion strategies for geophysical data have become increasingly popular since they allow to combine complementary information from different data sets in an efficient way. However, for joint inversion algorithms that use methods that are sensitive to different parameters it is important that they are not restricted to specific survey arrays and subsurface conditions. Hence, joint inversion schemes are needed that 1) adequately balance data from the different methods and 2) use links between the parameter models that are suited for a wide range of applications. Here, we combine MT, seismic tomography and gravity data in a non-linear joint inversion that accounts for these critical issues. Data from the different methods are inverted separately and are joined through constrains accounting for parameter relationships. An advantage of performing the inversions separately (and not together in one matrix) is that no relative weighting between the data sets is required. To avoid that the convergence behavior of the inversions is profoundly disturbed by the coupling, the strengths of the associated constraints are re-adjusted at each iteration. As criteria to control the adaption of the coupling strengths we used a general version of the well-known discrepancy principle. Adaption of the coupling strengths makes the joint inversion scheme also applicable to subsurface conditions, for which the assumed relationships are only a rough first order approximation. So, the coupling between the different parameter models is automatically reduced if for some structures the true rock property behaviors differ significantly from the assumed relationships (e.g. the atypical density-velocity behavior of salt). We have tested our scheme first on different synthetic 2-D models for which the assumed parameter relationships are everywhere valid. We observe that the adaption of the coupling strengths makes the convergence of the inversions very robust and that the final results are close to the true models. In a next step the scheme has been applied on models for which the assumed parameter relationships are invalid for some structures. For these structures deviations from the relationships are present in the final results; however, for the remaining structures the relative behaviors of the physical parameters are still approximately described by the assumed relationship. Finally, we applied our joint inversion scheme on seismic, MT and gravity data collected offshore the Faroe Islands, where basalt intrusions are present.

Description: How the chemical composition of sea water changes on its journey through the world’s oceans is poorly understood. Systematic measurements of dissolved trace metals across the Pacific Ocean suggest that these metals may help track sources and mixing of water masses.

Description: In the eastern Black Sea, we determined methane (CH4) concentrations, gas hydrate volumes, and their vertical distribution from combined gas and chloride (Cl−) measurements within pressurized sediment cores. The total gas volume collected from the cores corresponded to concentrations of 1.2–1.4 mol CH4 kg−1 porewater at in-situ pressure, which is equivalent to a gas hydrate saturation of 15–18% of pore volume and amongst the highest values detected in shallow seep sediments. At the central seep site, a high-resolution Cl− profile resolved the upper boundary of gas hydrate occurrence and a continuous layer of hydrates in a sediment column of 120 cm thickness. Including this information, a more precise gas hydrate saturation of 22–24% pore volume could be calculated. This volume was higher in comparison to a saturation calculated from the Cl− profile alone, resulting in only 14.4%. The likely explanation is an active gas hydrate formation from CH4 gas ebullition. The hydrocarbons at Batumi Seep are of shallow biogenic origin (CH4 〉 99.6%), at Pechori Mound they originate from deeper thermocatalytic processes as indicated by the lower ratios of C1 to C2–C3 and the presence of C5.

Description: Earth processes related to incipient continent-continent collision have been studied via the example of Cyprus and the Eratosthenes Seamount in the eastern Mediterranean. Subduction of the African plate beneath the Cyprus-Anatolian plate continued until the seamount, and perhaps a predecessor, the Hecataeus Rise, approached the Cyprus arc trench. The following transition from subduction to collision triggered a series of synchronous deformations across the collision zone between Africa-Sinai-Arabia and Eurasia-Anatolia, including the entire eastern Mediterranean region. This fundamental Earth process has been studied during research cruise MSM14/3 with RV Maria S. Merian in spring 2010. 39 MCS-profiles of more than 2300 km entire length, more than 3000 km magnetic and sediment echosounder data, and about 4000 km of gravity data have been recorded. Four wide-angle reflection/refraction profiles across the seamount were measured with up to 34 OBS deployments along each profile. 10 ocean-bottommagnetotelluric stations were deployed along one of these profiles that connects the seamount with the Hecataeus Rise. One 650 km long amphibian refraction profile strikes across the seamount, Cyprus and southern Turkey. Of the 250 land stations, 200 were deployed in southern Turkey and 50 in Cyprus. A first analysis of the collected data led to the following hypothesis about the interrelation of observed processes: Continent-continent collision caused a compressional regime in the crustal lithosphere, which resulted in the flexure (of the Eratosthenes Seamount), uplift (of Cyprus and Turkey) and accordingly an increased tilt of the facing slopes. The collision reactivated Mesozoic fault lineaments in the Levantine Basin like the Baltim-Hecataeus-Line and created the Hecataeus Rise. Shortening in the non-consolidated Messinian to Holocene sediment succession between the seamount and Cyprus resulted in faulting, folding and compressional salt diapirism. The increase in pore pressure causes fluid migration and mud volcanism. Slope tilt and faulting triggered mass wasting. All of these processes are still shaping the seafloor morphology and interact with the bottom current circulation, which is reflected by sediment drift deposition, sediment remobilisation and erosion, which facilitates again mass wasting.

Description: The Atlantic Ocean receives warm, saline water from the Indo-Pacific Ocean through Agulhas leakage around the southern tip of Africa. Recent findings suggest that Agulhas leakage is a crucial component of the climate system and that ongoing increases in leakage under anthropogenic warming could strengthen the Atlantic overturning circulation at a time when warming and accelerated meltwater input in the North Atlantic is predicted to weaken it. Yet in comparison with processes in the North Atlantic, the overall Agulhas system is largely overlooked as a potential climate trigger or feedback mechanism. Detailed modelling experiments—backed by palaeoceanographic and sustained modern observations—are required to establish firmly the role of the Agulhas system in a warming climate.

Description: Climate variability in the tropical Atlantic Ocean is determined by large-scale ocean–atmosphere interactions, which particularly affect deep atmospheric convection over the ocean and surrounding continents1. Apart from influences from the Pacific El Niño/Southern Oscillation2 and the North Atlantic Oscillation3, the tropical Atlantic variability is thought to be dominated by two distinct ocean–atmosphere coupled modes of variability that are characterized by meridional4, 5 and zonal6, 7 sea-surface-temperature gradients and are mainly active on decadal and interannual timescales, respectively8, 9. Here we report evidence that the intrinsic ocean dynamics of the deep equatorial Atlantic can also affect sea surface temperature, wind and rainfall in the tropical Atlantic region and constitutes a 4.5-yr climate cycle. Specifically, vertically alternating deep zonal jets of short vertical wavelength with a period of about 4.5 yr and amplitudes of more than 10 cm s−1 are observed, in the deep Atlantic, to propagate their energy upwards, towards the surface10, 11. They are linked, at the sea surface, to equatorial zonal current anomalies and eastern Atlantic temperature anomalies that have amplitudes of about 6 cm s−1 and 0.4 °C, respectively, and are associated with distinct wind and rainfall patterns. Although deep jets are also observed in the Pacific12 and Indian13 oceans, only the Atlantic deep jets seem to oscillate on interannual timescales. Our knowledge of the persistence and regularity of these jets is limited by the availability of high-quality data. Despite this caveat, the oscillatory behaviour can still be used to improve predictions of sea surface temperature in the tropical Atlantic. Deep-jet generation and upward energy transmission through the Equatorial Undercurrent warrant further theoretical study.