ALBERT

Beschreibung: Here, we outline how to identify hydrogenase enzymes from metagenomic fosmid libraries through an activity-based screening approach. A metagenomic fosmid library is constructed in E. coli and the fosmids are transferred into a hydrogenase deletion mutant of Shewanella oneidensis MR-1 (ΔhyaB) via triparental mating. If a fosmid clone exhibits hydrogen-uptake activity, S. oneidensis’ phenotype is restored and hydrogenase activity is indicated by a color change of the medium from yellow to colorless. The screen enables screening of 48 metagenomic fosmid clones in parallel.

Beschreibung: Bacteriophages, also called phages, are viruses of bacteria. They are the most common and diverse biological entities on this planet. For metagenomic investigation, their diversity is also their biggest obstacle. The direct metagenomic sequence of environmental phage communities often leads to short genomic fragments limiting the investigation to a few individual aspects of phage biology and diversity. The presented protocol for generating a host-associated metagenome reduces the phage diversity to a concise and accessible size. Metagenome sequencing often leads to complete genomes, and the availability of a suitable host system ensures further experimental investigation.

Beschreibung: Most fish stocks in the European Union (EU) are still being overfished. One recent measure of the EU common fisheries policy to curb overfishing is the introduction of landing obligations that are meant to reduce discards, but the success of landing obligations is controversial, as discards still take place. In the German Western Baltic Sea , discards are currently estimated using ship observer data, but vessels 〈12 m are not sufficiently controlled. We here use an independent method and document widespread discard of undersized cod and flatfish in late summer 2018 using video transects. Discards along the coastline of the south-western Baltic Sea amount to an extrapolated 14.0 t of cod and 1.0 t of flatfish decomposing on the sea floor in 1-13 m depth in a subarea of Mecklenburg Bight that covers only 2.3% of ICES (International Council for the Exploration of the Sea ) subdivisions 22-24, the habitat of Western Baltic cod. Compared to a similar video-mapping seven years earlier (in 2011), the amount of discard increased markedly, suggesting that the implementation of landing obligations in the time between the two mappings for under-sized catches has not resulted in a decrease but an increase of discards. We suggest that higher observed discards of cod in 2018 are also due to a high percentage of cod coming from the 2016-cohort of the Western Baltic cod stock which are just undersized but nevertheless caught by most passive net gear. Our data complement estimates based on ship observer data, while providing the first direct evidence of the fate of discards in the benthic marine habitat.

Beschreibung: Although considerable progress has been made in the management and planning of the marine environment, important gaps still exist in streamlining policies across governance levels, maritime sectors, and between different countries. This can hinder effective Maritime Spatial Planning (MSP) and prevent harmonious cross-sectoral cooperation, and importantly, cross-border or trans-boundary collaboration. These may in turn have serious implications for overall ocean governance and ultimately, marine sustainability. The North Atlantic presents an ideal case-study region for reviewing these issues: North Atlantic countries have different governance structures, and as such, different approaches to marine policy. Therefore, for an effective marine management, cross-sectoral and cross-border MSP in the region, there is a need to review marine and maritime policies in order to identify differences and commonalities among countries. This chapter reviews major policies for the marine environment in the North Atlantic and assesses where differences between countries exist and at which governance level they are being created. Key research questions include: (i) Are there significant differences in marine policy between North Atlantic countries? Moreover, are there any substantial geographical/political differences? (ii) Are there differences in implementation of key policies? Such an analysis requires a sound framework for comparison among countries. To that end, the use of “horrendograms”, a tool increasingly being used by the marine research and planning community to assess such issues, is adopted. Results indicate that key differences between countries are created primarily at a national level of marine governance. Although differences between countries exist, overall strategic targets are similar. For instance, whilst the political systems of certain North Atlantic countries may differ substantially, key objectives for major sectors, such as fisheries and conservation, are similar – even when such objectives are implemented at different levels. Findings from the study can enable targeted policy intervention and, as such, assist the development of future outlooks of ocean governance in the region. Results can also aid the development of future visions and scenarios for MSP in the Atlantic region.

Beschreibung: "Für ein gutes Miteinander auf See“ ist eine Initiative am GEOMAR Helmholtz-Zentrum für Ozeanforschung Kiel, die sich der Prävention von sexualisierter Belästigung, Diskriminierung und Gewalt (SBDG) auf deutschen Forschungsschiffen widmet. Geleitet wird die Initiative vom Gleichstellungsteam, das in der komplexen Organisationsstruktur der Forschungsschifffahrt viele Akteur*innen zusammenbringen muss, um die Maßnahmen passgenau zu entwickeln und zu etablieren. Auf Forschungsfahrten sind die Menschen für einen längeren Zeitraum auf engem Raum zusammen und können unerwünschten Situationen nicht ausweichen. Das Ziel der Initiative ist es, dafür eine Rettungsinsel zu bieten: Etablierte und klare Strukturen sollen Sicherheit geben und eine Klärung von unerwünschten Situationen ermöglichen. Dieser Beitrag gibt einen Einblick in die Vorgehensweise der Entwicklung der Initiative und erläutert, welche Herausforderungen Forschungsschiffe als Arbeitsort für eine SBDG-Initiative darstellen.

Beschreibung: Dieses Kapitel behandelt die visuelle Navigation von autonomen Unterwasserfahrzeugen (AUVs) mit und ohne gegebene Karte, wobei Letzteres als Simultane Lokalisierung und Kartierung (SLAM) bezeichnet wird. Wir fassen die Herausforderungen und Möglichkeiten in Unterwasserumgebungen zusammen, die die visuelle Navigation von der Landnavigation unterscheiden, und geben auch einen kurzen Überblick über den aktuellen Stand der Technik in diesem Bereich. Dann argumentieren wir als Positionspapier, warum viele dieser Herausforderungen durch eine angemessene Modellierung von Unsicherheiten in der SLAM-Darstellung bewältigt werden könnten. Dies würde insbesondere dem SLAM-Algorithmus ermöglichen, die Mehrdeutigkeit zwischen „Ich sehe das gleiche Merkmal wieder“, „Ich sehe ein anderes, aber ähnlich aussehendes Merkmal“ und „Die Umgebung hat sich verändert und das Merkmal hat sich bewegt“ gründlich zu behandeln.

Beschreibung: The Storegga Slide is the largest known exposed submarine landslide in the world, which triggered a tsunami that inundated the coasts of northern Europe ~8,150 years ago. Previous studies suggested the removal of 50–70 m of sediment from the northern slide scar segment, contributing half of the total slide volume of up to 3200 km³. However, new sediment echosounder profiles and sedimentological constraints show that most material within the northern Storegga slide scar had already failed ~20,000 years ago, at the end of the Last Glacial Maximum. We refer to this previously undetected slope failure as the Nyegga Slide. In our revised slope failure reconstruction, the Nyegga Slide removed more than 35 m of sediments that were previously attributed to the tsunamigenic Storegga Slide. This implies that large slope failures at the mid-Norwegian margin occur more frequently than previously thought, indicating a higher tsunami hazard for the North Atlantic.

Beschreibung: For the first time, the processes controlling the variations of mixed layer temperature (MLT) and salinity (MLS) in the Banda Sea are quantified using data from a single Argo float in combination with satellite and reanalysis outputs from August 2017 to August 2019. This augments previous studies that utilized ocean model data only. We document the presence of a barrier layer and quantify the roles of air-sea heat and mass exchanges, horizontal advection, and vertical entrainment in the seasonal variability of MLT and MLS. We find that heat gains and losses at the air-sea interface are the main contributor to the warming and cooling of the MLT. Seasonal changes in MLS are driven by advection of low salinity water rather than freshwater fluxes from precipitation and evaporation. This is particularly the case during the late northwest and monsoon transition period from February to April when low salinity is advected eastward from the Java Sea into the Banda Sea.

Beschreibung: A quantitative local analytical method with the application of inductively coupled plasma mass spectrometry with laser ablation (LA-ICP-MS) was tested at Vernadsky Institute for the determination of contents of trace elements (Cu, Zn, Co, Ni, Mn, Cr, Sc, V, Ca, Ti, Al, Y, and REE) in olivine. Olivine phenocrysts from volcanic rocks of various geological settings have been studied: island-arc basalts, mid-ocean ridge (MOR) basalts, and high-alkaline continental volcanic rocks. The contents of some elements (Ni, Co, Mn, Cr, Sc, and Zn) systematically vary during the evolution of the composition of olivine, and the concentration fields of these elements in olivine from different settings overlap one another. At the same time, the contents of some other elements (Ca, Al, Ti, V, and Cu) fundamentally differ in olivine from different geological settings. Copper content in olivine from oceanic tholeiites and highly alkaline continental volcanics is 1–3 ppm, which is systematically lower than copper content in olivine from island-arc basalts (3–9 ppm). The concentrations of vanadium in olivine in MOR basalts are higher than in island-arc and alkaline continental ones, which may be due to relatively more reduced crystallization conditions as more favorable for the incorporation of V3+ into the olivine structure. Variations in the distribution coefficients of trace elements between olivine and silicate melt (DOl/Melement) were determined for volcanic rocks from Kamchatka, the Bouvet Triple Junction, and Gaussberg volcano. It has been demonstrated that the unusually high values DOl/MNi of DOl/MNi = 50–150 previously identified for the lamproites of Gaussberg volcano indicate a mismatch between the composition of the quenched glass and the composition of the equilibrium melt for olivine phenocrysts. When using the bulk compositions of Gaussberg rocks, values of DOl/MNi = 11–21 were obtained, which correspond to experimental estimates for high-potassium rocks. The redox crystallization conditions of the studied rocks were estimated using several oxybarometers based on the distribution of vanadium between coexisting olivine and melt. These values were: ΔQFM= +0.6 to +1.5 for oceanic tholeiites of the Bouvet Triple Junction area, South Atlantic, and ΔQFM = +1.5 to +2.4 for Mutnovsky volcano, Kamchatka. Estimates of the redox crystallization conditions of the highly alkaline rocks of Gaussberg volcano significantly vary depending on which model is chosen: ΔQFM= +0.2 to +4.8, which may be due to the strong effect of K2O content in the melt involved in one of the models. The newly acquired analytical data confirmed the possibility of using contents of trace elements in olivine to characterize igneous systems from different geological settings and highlighted the need for additional experimental studies on the distribution of these elements between olivine and melt, especially in highly alkaline systems.