Skip to main content
Log in

The faint band/interband region 28C2 to 28C4-5(−) of the Drosophila melanogaster salivary gland polytene chromosomes is rich in transcripts

  • Published:
Molecular and General Genetics MGG Aims and scope Submit manuscript

Summary

Urate oxidase mRNA and five other transcripts map along 38 kb of DNA in the region 28C on the Drosophila melanogaster second chromosome. Three biotinylated restriction fragments from this 38 kb of DNA, one from each end and one from the middle, were individually hybridized in situ to slightly stretched salivary gland polytene chromosomes. The data from these in situ hybridizations in combination with the transcription map of the 38 kb of DNA indicate that: (i) there are six discrete RNA species encoded along the 38 kb of DNA and (ii) these six transcripts map to the faint band/interband region which includes the proximal edge of 280, the three faint bands, 28C2, 280 and 28C4-5(−), and the adjacent interband chromatin. Our data are consistent with the few published studies directly demonstrating that faint band/interband regions of the Drosophila melanogaster salivary gland polytene chromosomes code for a high density of transcripts.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Ananiev EV, Barsky VE (1985) Elementary structures in polytene chromosomes of Drosophila melanogaster. Chromosoma 93:104–112

    Google Scholar 

  • Ashburner M (1989) Drosophila: A laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York

    Google Scholar 

  • Beermann W (1972) Chromomeres and genes. In: Beermann W (ed) Developmental studies on giant chromosomes, vol 4. Springer-Verlag, New York, pp 1–33

    Google Scholar 

  • Bossy B, Hall LMC, Spierer P (1984) Genetic activity along 315 kb of the Drosophila chromosome. EMBO J 3:2537–2541

    Google Scholar 

  • Bridges PN (1942) A new map of the salivary gland 2L-chromosome. J Hered 33:403–408

    Google Scholar 

  • Feinberg AP, Vogelstein B (1984) A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal Biochem 137:266–267

    Google Scholar 

  • Friedman TB (1973) Observations on the regulation of uricase activity during development of Drosophila melanogaster. Biochem Genet 8:37–45

    Google Scholar 

  • Friedman TB, Johnson DH (1977) Temporal control of urate oxidase activity in Drosophila: Evidence for an autonomous timer in the Malpighian tubules. Science 197:477–479

    Google Scholar 

  • Fujita S, Takamoto K (1963) Synthesis of messenger RNA on the polytene chromosomes of dipteran salivary gland. Nature 200:494–495

    Google Scholar 

  • Hall LMC, Mason PJ, Spierer P (1983) Transcripts, genes and bands in 315,000 base-pairs of Drosophila DNA. J Mol Biol 169:83–96

    Google Scholar 

  • Hill RJ, Rudkin GT (1987) Polytene chromosomes: the status of the band-interband question. BioEssays 7:35–40

    Google Scholar 

  • Jamrich MJ, Greenleaf AL, Bautz EKF (1977) Localization of RNA polymerase in polytene chromosomes of Drosophila melanogaster. Proc Natl Acad Sci USA 74:2079–2083

    Google Scholar 

  • Kral G, Johnson DH, Wing M, Friedman TB (1982) Temporal control of urate oxidase activity during development of the third-instar larva of Drosophila: The role of 20-hydroxyecdysone. Dev Genet 3:215–233

    Google Scholar 

  • Kral LG, Johnson DH, Burnett JB, Friedman TB (1986) Cloning a cDNA for Drosophila melanogaster urate oxidase. Gene 45:131–137

    Google Scholar 

  • Krawetz SA, Anwar RA (1984) Optimization of the isolation of biologically active mRNA from chick embryo aorta. Bio Techniques 2:342–347

    Google Scholar 

  • Kress H, Meyerowitz EM, Davidson N (1985) High resolution mapping of in situ hybridized biotinylated DNA to surface-spread Drosophila polytene chromosomes. Chromosoma 93:113–122

    Google Scholar 

  • Laird CD (1980) Structural paradox of polytene chromosomes. Cell 22:869–874

    Google Scholar 

  • Lifschytz E (1983) Sequence replication and banding organization in the polytene chromosomes of Drosophila melanogaster. J Mol Biol 164:17–34

    Google Scholar 

  • Marusyk R, Sergeant A (1980) A simple method for dialysis of small-volume samples. Anal Biochem 105:403–404

    Google Scholar 

  • Mott MR, Hill RJ (1986) The ultrastructural morphology of native salivary gland chromosomes of Drosophila melanogaster: The band-interband question. Chromosoma 94:403–411

    Google Scholar 

  • Muller HJ, Prokofyeva AA (1935) The individual gene in relation to the chromomere and the chromosome. Proc Natl Acad Sci USA 21:16–26

    Google Scholar 

  • Regulski M, Harding K, Kostriken R, Karch F, Levine M, McGinnis W (1985) Homeo box genes of the Antennapedia and Bithorax complexes of Drosophila. Cell 43:71–80

    Google Scholar 

  • Rykowski MC, Parmelee SJ, Agard DA, Sedat JW (1988) Precise determination of the molecular limits of a polytene chromosome band: regulatory sequences for the Notch gene are in the interband. Cell 54:461–472

    Google Scholar 

  • Sass H (1982) RNA polymerase B in polytene chromosomes: immunofluorescent and autoradiographic analysis during stimulated and repressed RNA synthesis. Cell 28:269–270

    Google Scholar 

  • Saura AO, Sorsa V (1979a) Electron microscopic analysis of the banding pattern in the salivary gland chromosomes of Drosophila melanogaster, divisions 21 and 22 of 2L. Hereditas 90:39–49

    Google Scholar 

  • Saura AO, Sorsa V (1979b) Electron microscopic analysis of the banding pattern in the salivary gland chromosomes of Drosophila melanogaster divisions 27, 28 and 29 of 2L. Hereditas 91:219–230

    Google Scholar 

  • Simon JA, Sutton CA, Lobel RB, Glaser RL, Lis JT (1985) Determinants of heat shock-induced chromosome puffing. Cell 40:805–817

    Google Scholar 

  • Sorsa V (1982) An attempt to estimate DNA content and distribution of the zeste-white region of the X chromosome of Drosophila melanogaster. Biol Zentralblatt 101:81–95

    Google Scholar 

  • Sorsa V (1988) Chromosome maps of Drosophila, vols I and II. CRC Press, Florida

    Google Scholar 

  • Spierer A, Spierer P (1984) Similar level of polyteny in bands and interbands of Drosophila giant chromosomes. Nature 307:176–178

    Google Scholar 

  • Spierer P, Spierer A, Bender W, Hogness D (1983) Molecular mapping of genetic chromomeric units in Drosophila melanogaster. J Mol Biol 168:35–50

    Google Scholar 

  • Vlassova IE, Umbetova GH, Zimmermann VH, Alonso C, Belyaeva ES, Zhimulev IF (1985) Immunofluorescence localization of DNA:RNA hybrids in Drosophila melanogaster polytene chromosomes. Chromosoma 91:251–258

    Google Scholar 

  • Wallrath LL, Burnett JB, Friedman TB (1990) Molecular characterization of the Drosophila melanogaster urate oxidase gene: An ecdysone-repressible gene expressed only in the Malpighian tubules. Mol Cell Biol 10:5114–5127

    Google Scholar 

  • Wharton KA, Johansen KM, Xu T, Artavanis-Tsakonas S (1985) Nucleotide sequence from the neurogenic locus Notch implies a gene product that shares homology with proteins containing EGF-like repeats. Cell 43:567–581

    Google Scholar 

  • Young MW, Judd BH (1978) Nonessential sequences, genes, and the polytene chromosome bands of Drosophila melanogaster. Genetics 88:723–742

    Google Scholar 

  • Zhimulev IF, Belyaeva ES (1975) 3H-uridine labeling patterns in the Drosophila melanogaster salivary gland chromosomes X, 2R and 2L. Chromosoma 49:219–231

    Google Scholar 

  • Zhimulev IF, Belyaeva ES, Semeshin VF (1981) Informational content of polytene chromosome bands and puffs. Crit Rev Biochem 11:303–340

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Additional information

Communicated by B.H. Judd

Rights and permissions

Reprints and permissions

About this article

Cite this article

Friedman, T.B., Owens, K.N., Burnett, J.B. et al. The faint band/interband region 28C2 to 28C4-5(−) of the Drosophila melanogaster salivary gland polytene chromosomes is rich in transcripts. Mol Gen Genet 226, 81–87 (1991). https://doi.org/10.1007/BF00273590

Download citation

  • Received:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00273590

Key words

Navigation