Abstract
The properties of a new family of mobile dispersed genetic elements, mdg3, are described. Mdg3 is represented by a DNA fragment of about 5.5 kb long which is framed with two repetitive sequences 300–500 base pairs in length. Virtually the whole region of mdg3 including the repetitive sequences is transcribed and, as the result, 26S poly(A)+RNA is formed. The repetitive sequence is present at least at the 3′-end of a major 26S transcript. Both strands of mdg3 are transcribed, but one direction is predominant. Besides 26S RNA, a minor transcript, 15S poly(A)+RNA, can be observed. 15S RNA does not contain sequences corresponding to the middle of mdg3. Possibly it is formed from 26S RNA by means of splicing. About 15 copies of mdg3 are present in the genome of embryonic cells and polytene chromosomes. Different copies of mdg3 are identical but surrounded with different DNA sequences. In culture cells, the gene is amplified and the number of copies is increased ∼ 13 times. Mdg3 is localized in 15–17 sites on different chromosomes of D. melanogaster. Its location varies from one animal to another. The properties and possible nature of mobile dispersed genetic elements are discussed.
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Ananiev, E.V., Barsky, V.E.: Localization of RNA synthesis sites in the B-3C region of the D. melanogaster X-chromosome. Chromosoma (Berl.) 65, 359–371 (1978)
Ananiev, E.V., Belyaeva, E.S., Gvozdev, V.A., Tchurikov, N.A., Ilyin, Y.V., Georgiev, G.P.: Scattered reiterated genes of Drosophila melanogaster with varying location. II. Location of Dm225 and Dm234 genes at the regions of intercalary heterochromatin. Genetika (Russ.) 15, 785–798 (1979)
Ananiev, E.V., Gvozdev, V.A., Ilyin, Y.V., Tchurikov, N.A., Georgiev, G. P.: Reiterated genes with varying location in intercalary heterochromatin regions of Drosophila melanogaster polytene chromosomes. Chromosoma (Berl.) 70, 1–17 (1978)
Ananiev, E.V., Ilyin, Y.V., Tchurikov, N.A.: Multiple structural genes of Drosophila melanogaster with varying location in chromosomes. Genetika (Russ.) 15, 1360–1369 (1979b)
Bayev, A.A., Jun., Krayev, A.S., Lyubomirskaya, N.Y., Ilyin. Y.V., Skryabin, K.G., Georgiev, G.P.: The transposable element mdg3 in Drosophila melanogaster is flanked with the perfect direct and mismatched inverted repeats. Nucleic Acids Res. (in press, 1980)
Bolivar, F., Rodriguez, R.C., Greene, P.J., Betlach, M.C., Heyneker, H.C., Boyer, H.W., Crosa, J.H., Falkow, S.: Construction and characterization of new cloning vehicles. II. A multipurpose cloning system. Gene 2, 95–113 (1977)
Bonner, J.J., Pardue, M.L.: Ecdysone-stimulated RNA synthesis in imaginai discs of Drosophila melanogaster. Chromosoma (Berl.) 58, 87–99 (1976)
Cameron, J.R., Loh, E.Y., Davis, R.W.: Evidence for transposition of dispersed repetitive DNA families in yeast. Cell 16, 739–752 (1979)
Cameron, J.R., Panasenko, S.M., Lehman, J.R., Davis, R.W.: In vitro construction of bacteriophage carrying segments of the Escherichia coli chromosome: selection of hybrids containing the gene for DNA ligase. Proc. nat. Acad. Sci. (Wash.) 72, 3416–3420 (1975)
Denhardt, D.T.: A membrane-filter technique for the detection of complementary DNA. Biochem. biophys. Res. Comm. 23, 641–646 (1966)
Finnegan, D.J., Rubin, G.M., Young, H.W., Hogness, D.S.: Repeated gene families in Drosophila melanogaster. Cold Spr. Harb. Symp. quant. Biol. 42, 1053–1064 (1977)
Georgiev, G. P.: Studies on the structure and function of the eukaryotic genome. In: Soviet Sci. Rev. D. (V.P. Skulachev, ed.), vol. 1, pp. 215–266. Amsterdam 1980
Georgiev, G.P., Ilyin, Y.V., Ryskov, A.P., Tchurikov, N.A.. Yenikolopov, G.N., Gvozdev, V.A., Ananiev, E.V.: DNA fragments containing structural genes and the adjacent sequences. Science 195, 394–397 (1977)
Georgiev, G.P., Varshavsky, A.J., Ryskov, A.P., Church, R.B.: On the structural organization of the transcriptional unit in animal chromosomes. Cold Spr. Harb. Symp. quant. Biol. 38, 869–884 (1974)
Gillespie, D., Spiegelman, S.: A quantitative assay for DNA-RNA hybrids with DNA immobilized on a membrane. J. molec. Biol. 12, 829–842 (1965)
Grunstein, M., Hogness, D.S.: Colony hybridization: a method for the isolation of cloned DNA that contain a specific gene. Proc. nat. Acad. Sci. (Wash.) 72, 3961–3969 (1975)
Ilyin, Y.V., Chmeliauskaite, V.G., Georgiev, G.P.: The double-stranded sequences in RNA of Drosophila melanogaster: relation to mobile dispersed genes. Nucleic Acids Res. (in press, 1980)
Ilyin, Y.V., Tchurikov, N.A., Georgiev, G.P.: Selection and some properties of recombinant clones of lambda bacteriophage containing structural genes of Drosophila melanogaster. Nucleic Acids Res. 3, 2115–2127 (1976)
Ilyin, Yu.V., Tchurikov, N.A., Ananiev, E.V., Ryskov, A.P., Yenikolopov, G.N., Limborska, S.A., Maleeva, N.E., Gvozdev, V.A., Georgiev, G.P.: Studies on the DNA fragments of mammals and Drosophila containing structural genes and adjacent sequences. Cold Spr. Harb. Symp. quant. Biol. 42, 959–970 (1977)
Ilyin, Y.V., Tchurikov, N.A., Lyubomirskaya, N.V., Georgiev, G.P.: Scattered reiterated genes of Drosophila melanogaster with varying location. I General characteristics of 3 selected families of cloned genes. Genetika (Russ.) 15, 775–784 (1979)
Jelinek, W.R.: Specific nucleotide sequences in HeLa cells inverted repeated RNA: enrichment for sequences found in double-stranded regions of heterogeneous nuclear RNA. J. molec. Biol. 115, 591–601 (1977)
Jelinek, W.R., Darnell, J.E.: Double-stranded regions in heterogeneous nuclear RNA from HeLa cells. Proc. nat. Acad. Sci. (Wash.) 69, 2537–2541 (1972)
Kakpakov, V.T., Gvozdev, V.A., Platova, T.P., Polukarova, L.G.: In vitro establishment of embryonic cell lines of Drosophila melanogaster. Genetika (Russ.) 5, 67–75 (1969)
Kramerov, D.A., Grigoryan, A.A., Ryskov, A.P., Georgiev, G.P.: Long double-stranded sequences (dsRNA-B) of nuclear pre-mRNA consist of a few highly abundant classes of sequences: evidence from DNA cloning experiments. Nucleic Acids Res. 6, 697–713 (1979)
McKenzie, S.L., Henikoff, S., Meselson, M.: Localization of RNA from heat-induced polysomes at puff sites of Drosophila melanogaster. Proc. nat. Acad. Sci. (Wash.) 72, 1117–1121 (1975)
Panet, A., van de Sande J.H., Loewer, P.C., Khorana, H.G., Raac, A.J., Lillehang, J.R., Kleppe, K.: Physical characterization and simultaneous purification of bacteriophage T4 induced polynucleotide kinase, polynucleotide ligase, and deoxyribonucleic acid polymerase. Biochemistry 12, 5045–5050 (1973)
Potter, S.S., Brorein, W.J., Dunsmuir, P., Rubin, G.M.: Transposition of elements of the 412, copia and 297 dispersed repeated gene families in Drosophila. Cell 17, 415–427 (1979)
Rigby, P.W.S., Diekmann, M., Rhodes, C., Berg, P.: Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I. J. molec Biol. 113, 237–251 (1977)
Ryskov, A.P., Farashyan, V.R., Georgiev, G.P. Ribonuclease-stable base sequence specific exclusively for giant dRNA. Biochim. biophys. Acta (Amst.) 262, 568–572 (1972)
Ryskov, A.P., Saunders, G.F., Farashyan, V.R., Georgiev, G.P.: Double-helical regions in nuclear precursor of mRNA (pre-mRNA). Biochim. biophys. Acta (Amst.) 312, 152–164 (1973)
Scherrer, K., Darnell, J.E.: Sedimentation characteristics of rapidly labeled RNA from HeLa cells. Biochem. biophys. Res. Comm. 7, 486–490 (1962)
Sharp, P.A., Sugden, B., Sambrook, J.: Detection of two restriction endonuclease activities in Haemophilus parainfluenzae using analytical agarose-ethidium bromide electrophoresis. Biochemistry 12, 3055–3063 (1973)
Shaw, J.E., Huang, E.-S., Pagano, J.S.: Iodination of herpes virus nucleic acids. J. Virol. 16, 132–140 (1975)
Southern, E.M.: Detection of specific sequences among DNA fragments separated by gel electrophoresis. J. molec. Biol. 98, 503–517 (1975)
Strobel, E., Dunsmuir, P., Rubin, G.M.: Polymorphisms in the chromosomal locations of elements of the 412, copia and 297 dispersed repeated gene families in Drosophila. Cell 17, 429–439 (1979)
Tchurikov, N.A., Ilyin, Y.V., Ananiev, E.V., Georgiev, G.P.: The properties of gene Dm225, a representative of dispersed repetitive genes in Drosophila melanogaster. Nucleic Acids Res. 5, 2169–2187 (1978)
Tchurikov, N.A., Zelentsova, E.S., Georgiev, G.P.: Clusters containing different mobile dispersed genes in the genome of Drosophila melanogaster. Nucleic Acids Res. 8, 1243–1258 (1980)
Tchuring, R.W.J., Sanders, J.P.M., Borst, P.: A free-squeeze method for recovering long DNA from agarose gels. Analyt. Biochem. 66, 213–220 (1975)
Young, M.W.: Middle repetitive DNA: a fluid component of the Drosophila genome. Proc. nat. Acad. Sci. (Wash.) 76, 6274–6278 (1979)
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Ilyin, Y.V., Chmeliauskaite, V.G., Ananiev, E.V. et al. Isolation and characterization of a new family of mobile dispersed genetic elements, mdg3, in Drosophila melanogaster . Chromosoma 81, 27–53 (1980). https://doi.org/10.1007/BF00292421
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DOI: https://doi.org/10.1007/BF00292421