Skip to main content
Log in

Purification and biochemical characterization of a laccase from the aquatic fungus Myrioconium sp. UHH 1-13-18-4 and molecular analysis of the laccase-encoding gene

  • Biotechnologically Relevant Enzymes and Proteins
  • Published:
Applied Microbiology and Biotechnology Aims and scope Submit manuscript

Abstract

Myrioconium sp. strain UHH 1-13-18-4 is an ascomycete anamorph isolated from the river Saale, Central Germany. An extracellular, monomeric, and glycosylated laccase with a molecular mass of 72.7 kDa as determined by matrix-assisted laser desorption/ionization-time of flight-mass spectrometry and an isoelectric point below 2.8 was purified from CuSO4 and vanillic acid amended liquid fungal cultures grown in malt extract medium. The catalytic efficiencies (k cat/K m) for the oxidation of syringaldazine, 2,6-dimethoxyphenol, and 2,2′-azino-bis(3-ethylbenzthiazoline-6-sulfonate) were 67.3, 46.9, and 28.2 s−1 mM−1, respectively, with K m values of 4.2, 67.8, and 104.9 μM. After pre-incubation at different pH values and temperatures for 1 h, more than 80% of the initial laccase activity was retained between pH 4 to 6 and 15°C. The laccase-encoding gene was identified and sequenced at both the genomic and complementary DNA (cDNA) level, and corresponding structural characteristics and putative regulatory elements of the promoter region are reported. The identification of two tryptic peptides of the purified enzyme by mass spectrometry confirmed the identity of the functional laccase protein with the translated genomic sequence of the Myrioconium sp. laccase. Myrioconium sp. laccase shows the highest degree of identity with laccases from ascomycetes belonging to the family Sclerotiniaceae, order Helotiales.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7

Similar content being viewed by others

References

  • Abdel-Raheem A, Shearer CA (2002) Extracellular enzyme production by freshwater ascomycetes. Fungal divers 11:1–9

    Google Scholar 

  • Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped blast and psi-blast: A new generation of protein database search programs. Nucl Acids Res 25:3389–3402

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Arst HN, MacDonald DW (1975) A gene cluster in Aspergillus nidulans with an internally located cis-acting regulatory region. Nature 254:26–31

    Article  CAS  PubMed  Google Scholar 

  • Augustin T, Schlosser D, Baumbach R, Schmidt J, Grancharov K, Krauss G, Krauss G-J (2006) Biotransformation of 1-naphthol by a strictly aquatic fungus. Curr Microbiol 52:216–220

    Article  CAS  PubMed  Google Scholar 

  • Baldrian P (2006) Fungal laccases—occurrence and properties. FEMS Microbiol Rev 30:215–242

    Article  CAS  PubMed  Google Scholar 

  • Bannai H, Tamada Y, Maruyama O, Nakai K, Miyano S (2002) Extensive feature detection of N-terminal protein sorting signals. Bioinformatics 18:298–305

    Article  CAS  PubMed  Google Scholar 

  • Bendtsen JD, Nielsen H, von Heijne G, Brunak S (2004) Improved prediction of signal peptides: SignalP 3.0. J Mol Biol 340:783–795

    Article  CAS  PubMed  Google Scholar 

  • Benndorf D, Thiersch M, Loffhagen N, Kunath C, Harms H (2006) Pseudomonas putida KT2440 responds specifically to chlorophenoxy herbicides and their initial metabolites. Proteomics 6:3319–3329

    Article  CAS  PubMed  Google Scholar 

  • Berg JM, Tymoczky JL, Stryer L, Clarke ND (2002) Biochemistry. Freeman, New York

    Google Scholar 

  • Boerjan W, Ralph J, Baucher M (2003) Lignin biosynthesis. Annu Rev Plant Biol 54:519–546

    Article  CAS  PubMed  Google Scholar 

  • Bollag J-M, Liu S-Y, Minard RD (1982) Enzymatic oligomerization of vanillic acid. Soil Biol Biochem 14:157–163

    Article  CAS  Google Scholar 

  • Bucher VVC, Pointing SB, Hyde KD, Reddy CA (2004) Production of wood decay enzymes, loss of mass, and lignin solubilization in wood by diverse tropical freshwater fungi. Microb Ecol 48:331–337

    Article  CAS  PubMed  Google Scholar 

  • Call HP, Mücke I (1997) History, overview and applications of mediated lignolytic systems, especially laccase-mediator-systems (Lignozym®-process). J Biotechnol 53:163–202

    Article  CAS  Google Scholar 

  • Chefetz B, Chen Y, Hadar Y (1998) Purification and characterization of laccase from Chaetomium thermophilium and its role in humification. Appl Environ Microbiol 64:3175–3179

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Duran N, Rosa MA, D’Annibale, A, Gianfreda L (2002) Applications of laccases and tyrosinases (phenoloxidases) immobilized on different supports: A review. Enzyme Microb Tech 31:907–931

    Article  CAS  Google Scholar 

  • Faraco V, Giardina P, Sannia G (2003) Metal-responsive elements in Pleurotus ostreatus laccase gene promoters. Microbiology 149:2155–2162

    Article  CAS  PubMed  Google Scholar 

  • Galhaup C, Goller S, Peterbauer CK, Strauss J, Haltrich D (2002) Characterization of the major laccase isoenzyme from Trametes pubescens and regulation of its synthesis by metal ions. Microbiology 148:2159–2169

    Article  CAS  PubMed  Google Scholar 

  • Gasteiger E, Hoogland C, Gattiker A, Duvaud S, Wilkins MR, Appel RD, Bairoch A (2005) The proteomics protocols handbook. Humana, Totowa, NJ, USA

    Google Scholar 

  • Gianfreda L, Xu F, Bollag JM (1999) Laccases: A useful group of oxidoreductive enzymes. Bioremed J 3:1–26

    Article  CAS  Google Scholar 

  • Hall TA (1999) Bioedit: A user-friendly biological sequence alignment editor and analysis program for windows 95/98NT. Nucleic Acids Symp Ser 41:95–98

    CAS  Google Scholar 

  • Hodkinson M, Dalton SA (1973) Interactions between DDT and river fungi. II. Influence of culture conditions on the compatibility of fungi and p,p'-DDT. Bull Environ Contam Toxicol 10:356–359

    Article  CAS  PubMed  Google Scholar 

  • Hoegger PJ, Kilaru S, James TY, Thacker JR, Kües U (2006) Phylogenetic comparison and classification of laccase and related multicopper oxidase protein sequences. FEBS J 273:2308–2326

    Article  CAS  PubMed  Google Scholar 

  • Huang W-Y, Sheu S-J (2006) Separation and identification of the organic acids in Agelicae radix and Ligustici rhizoma by HPLC and CE. J Sep Sci 29:2616–2624

    Article  CAS  PubMed  Google Scholar 

  • Johannes C, Majcherczyk A (2000) Laccase activity tests and laccase inhibitors. J Biotechnol 78:193–199

    Article  CAS  PubMed  Google Scholar 

  • Junghanns C, Moeder M, Krauss G, Martin C, Schlosser D (2005) Degradation of the xenoestrogen nonylphenol by aquatic fungi and their laccases. Microbiology 151:45–57

    Article  CAS  PubMed  Google Scholar 

  • Junghanns C, Krauss G, Schlosser D (2007) Potential of aquatic fungi derived from diverse freshwater environments to decolourise synthetic azo and anthraquinone dyes. Bioresource Technol (in press)

  • Kellner H, Louis P, Buscot F (2007) Diversity of laccase-like multicopper oxidases genes in Morchellaceae: Identification of genes potentially involved in extracellular activities related to plant litter decay. FEMS Microb Ecol 61:153–163

    Article  CAS  Google Scholar 

  • Kiiskinen LL, Saloheimo M (2004) Molecular cloning and expression in Saccharomyces cerevisiae of laccase gene from the ascomycete Melanocarpus albomyces. Appl Environ Microbiol 70:137–144

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Kiiskinen LL, Viikari L, Kruus K (2002) Purification and characterisation of a novel laccase from the ascomycete Melanocarpus albomyces. Applied Microbiology and Biotechnology 59:198

    Article  CAS  PubMed  Google Scholar 

  • Kiiskinen L-L, Kruus K, Bailey M, Ylosmaki E, Siika-aho M, Saloheimo M (2004) Expression of Melanocarpus albomyces laccase in Trichoderma reesei and characterization of the purified enzyme. Microbiology 150:3065–3074

    Article  CAS  PubMed  Google Scholar 

  • Kirk PM, Cannon PF, David JC, Staplers JA (eds) (2001) Ainsworth and Bisby’s dictionary of the fungi. 9th edn. CABI Publishing, Wallingford, UK

  • Kumar S, Tamura K, Nei M (2004) Mega3: Integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5:150–163

    Article  CAS  PubMed  Google Scholar 

  • Larrondo LF, Avila M, Salas L, Cullen D, Vicuna R (2003) Heterologous expression of laccase cDNA from Ceriporiopsis subvermispora yields copper-activated apoprotein and complex isoform patterns. Microbiology 149:1177–1782

    Article  CAS  PubMed  Google Scholar 

  • Leonowicz A, Cho NS, Luterek J, Wilkołazka A, Wojtas-Wasilewska M, Matuszewska A, Hofrichter M, Wesenberg D, Rogalski J (2001) Fungal laccase: Properties and activity on lignin. J Basic Microbiol 41:185–227

    Article  CAS  PubMed  Google Scholar 

  • Liers C, Ullrich R, Pecyna M, Schlosser D, Hofrichter M (2007) Production, purification and partial enzymatic and molecular characterization of a laccase from the wood-rotting ascomycete Xylaria polymorpha. Enzyme Microb Tech 41:785–793

    Article  CAS  Google Scholar 

  • Litvintseva AP, Henson JM (2002) Cloning, characterization, and transcription of three laccase genes from Gaeumannomyces graminis var. tritici, the take-all fungus. Appl Environ Microbiol 68:1305–1311

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Martin C, Moeder M, Daniel X, Krauss G, Schlosser D (2007) Biotransformation of the polycyclic musks HHCB and AHTN and metabolite formation by fungi occurring in freshwater environments. Environ Sci Technol 41:5395–5402

    Article  CAS  PubMed  Google Scholar 

  • Matys V, Fricke E, Geffers R, Gossling E, Haubrock M, Hehl R, Hornischer K, Karas D, Kel AE, Kel-Margoulis OV, Kloos DU, Land S, Lewicki-Potapov B, Michael H, Münch R, Reuter I, Rotert S, Saxel H, Scheer M, Thiele S, Wingender E (2003) TransfacÒ: Transcriptional regulation, from patterns to profiles. Nucl Acids Res 31:374–378

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Mayer AM, Staples RC (2002) Laccase: New functions for an old enzyme. Phytochemistry 60:551–565

    Article  CAS  PubMed  Google Scholar 

  • Neuhoff V, Stamm R, Eibl H (1985) Clear background and highly sensitive protein staining with coomassie blue dyes in polyacrylamide gels: A systematic analysis. Electrophoresis 6:427–448

    Article  CAS  Google Scholar 

  • Nikolcheva LG, Bärlocher F (2002) Phylogeny of Tetracladium based on 18S rDNA. Czech Mycol 53:285–295

    Article  Google Scholar 

  • Ravelet C, Grosset C, Krivobok S, Montuelle B, Alary J (2001) Pyrene degradation by two fungi in a freshwater sediment and evaluation of fungal biomass by ergosterol content. Appl Microbiol Biotechnol 56:803–808

    Article  CAS  PubMed  Google Scholar 

  • Saito T, Hong P, Kato K, Okazaki M, Inagaki H, Maeda S, Yokogawa Y (2003) Purification and characterization of an extracellular laccase of a fungus (family Chaetomiaceae) isolated from soil. Enzyme and Microb Tech 33:520–526

    Article  CAS  Google Scholar 

  • Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning: A laboratory manual. Press Cold Spring Harbor, New York

    Google Scholar 

  • Saparrat MCN, Guillen F, Arambarri AM, Martinez AT, Martinez MJ (2002) Induction, isolation and characterisation of two laccases from the white rot basidiomycete coriolopsis rigida. Appl Environ Microbiol 68:1534–1540

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Schlosser D, Höfer C (2002) Laccase-catalyzed oxidation of Mn2+ in the presence of natural Mn3+ chelators as a novel source of extracellular H2O2 production and its impact on manganese peroxidase. Appl Environ Microbiol 68:3514–3521

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Schlosser D, Grey R, Fritsche W (1997) Patterns of ligninolytic enzymes in Trametes versicolor. Distribution of extra- and intracellular enzyme activities during cultivation on glucose, wheat straw and beech wood. Appl Microb Biotechnol 47:412–418

    Article  CAS  Google Scholar 

  • Shapiro MB, Senapathy P (1987) RNA splice junctions of different classes of eukaryotes: Sequence statistics and functional implications in gene expression. Nucl Acids Res 15:7155–7174

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Shearer CA, Descals E, Kohlmeyer B, Kohlmeyer J, Marvanova L, Padgett D, Porter D, Raja HA, Schmit JP, Thorton HA, Voglymayr H (2007) Fungal biodiversity in aquatic habitats. Biodivers Conserv 16:49–67

    Article  Google Scholar 

  • Shevchenko A, Jensen ON, Podtelejnikov AV, Sagliocco F, Wilm M, Vorm O, Mortensen P, Shevchenko A, Boucherie H, Mann M (1996) Linking genome and proteome by mass spectrometry: Large-scale identification of yeast proteins from two dimensional gels. Proc Natl Acad Sci U S A 93:14440–14445

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Siqueira JO, Nair MG, Hammerschmidt R, Safir GR (1991) Significance of phenolic compounds in plant-soil microbial systems. Crit Rev Plant Sci 10:63–121

    Article  CAS  Google Scholar 

  • Soden DM, Dobson ADW (2001) Differential regulation of laccase gene expression in Pleurotus sajor-caju. Microbiology 147:1755–1763

    Article  CAS  PubMed  Google Scholar 

  • Soden DM, O’Callaghan J, Dobson ADW (2002) Molecular cloning of a laccase isozyme gene from Pleurotus sajor-caju and expression in the heterologous Pichia pastoris host. Microbiology 148:4003–4014

    Article  CAS  PubMed  Google Scholar 

  • Stapleton PC, Dobson ADW (2003) Carbon repression of cellobiose dehydrogenase production in the white rot fungus Trametes versicolor is mediated at the level of gene transcription. FEMS Microbiol Lett 221:167–172

    Article  CAS  PubMed  Google Scholar 

  • Tetsch L, Bend J, Hölker U (2006) Molecular and enzymatic characterisation of extra- and intracellular laccases from the acidophilic ascomycete Hortaea acidophila. Antonie van Leeuwenhoek 90:183–194

    Article  CAS  PubMed  Google Scholar 

  • Thiele DJ (1992) Metal-regulated transcription in eukaryotes. Nucl Acids Res 20:1183–1191

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Thurston CF (1994) The structure and function of fungal laccases. Microbiology 140:19–26

    Article  CAS  Google Scholar 

  • Wessagowit V, Nalla VK, Rogan PK, McGrath JA (2005) Normal and abnormal mechanisms of gene splicing and relevance to inherited skin diseases. J Dermatol Sci 40:73–84

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Yoshida H (1883) Chemistry of lacquer (urushi). J Chem Soc 43:472–486

    Article  CAS  Google Scholar 

  • Yoshitake A, Katayama Y, Nakamura M, Limura Y, Kawai S, Morohoshi N (1993) N-linked carbohydrate chains protect laccase-iii from proteolysis in Coriolus versicolor. J Gen Microbiol 139:179–185

    Article  CAS  Google Scholar 

  • Zhao J, Hyman L, Moore C (1999) Formation of mRNA 3 ′ ends in eukaryotes: Mechanism, regulation, and interrelationships with other steps in mRNA synthesis. Microbiol Mol Biol R 63:405–445

    Article  CAS  Google Scholar 

Download references

Acknowledgement

We want to thank the German Research Foundation (DFG) for funding of C. Martin within the DFG graduate college 416.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to C. Martin.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Martin, C., Pecyna, M., Kellner, H. et al. Purification and biochemical characterization of a laccase from the aquatic fungus Myrioconium sp. UHH 1-13-18-4 and molecular analysis of the laccase-encoding gene. Appl Microbiol Biotechnol 77, 613–624 (2007). https://doi.org/10.1007/s00253-007-1207-2

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00253-007-1207-2

Keywords

Navigation