The 2023 MDPI Annual Report has
been released!
 
16 pages, 3406 KiB  
Article
Improvement of Commercial Vehicle Seat Suspension Employing a Mechatronic Inerter Element
by Xiaofeng Yang, Shuilan Bi, Yanling Liu, Yi Yang, Changning Liu and Jiahao Qin
World Electr. Veh. J. 2024, 15(5), 194; https://doi.org/10.3390/wevj15050194 (registering DOI) - 30 Apr 2024
Abstract
To further improve the ride comfort of commercial vehicles, a seat ISD (Inerter–Spring–Damper) suspension utilizing a mechatronic inerter is proposed in this paper. Firstly, a five-DOF (degree-of-freedom) commercial vehicle seat ISD model was built. Then, the positive real network constraint conditions of a [...] Read more.
To further improve the ride comfort of commercial vehicles, a seat ISD (Inerter–Spring–Damper) suspension utilizing a mechatronic inerter is proposed in this paper. Firstly, a five-DOF (degree-of-freedom) commercial vehicle seat ISD model was built. Then, the positive real network constraint conditions of a biquadratic impedance transfer function were determined, and the meta-heuristic intelligent optimization algorithm was used to solve the parameters. According to the solution, the impedance transfer function was obtained and the specific network structure was realized by network synthesis. Lastly, this study compares the vibration isolation performance of the mechatronic ISD suspension of the vehicle seat with that of a passive suspension. In comparison to passive seat suspension, the seat mechatronic ISD suspension reduces seat vibration transmissibility by 16.33% and vertical acceleration by 16.78%. Results indicate that the new suspension system can be an effective improvement in ride comfort. Full article
(This article belongs to the Special Issue Advanced Vehicle System Dynamics and Control)
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4 pages, 655 KiB  
Editorial
Editorial for the Special Issue on Biomaterials, Biodevices and Tissue Engineering
by Luis Jesús Villarreal-Gómez, José Manuel Cornejo-Bravo and Faruk Fonthal
Micromachines 2024, 15(5), 604; https://doi.org/10.3390/mi15050604 (registering DOI) - 30 Apr 2024
Abstract
Biomaterials, biodevices, and tissue engineering represent the cutting edge of medical science, promising revolutionary solutions to some of humanity’s most pressing health challenges (Figure 1) [...] Full article
(This article belongs to the Special Issue Biomaterials, Biodevices and Tissue Engineering)
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4 pages, 180 KiB  
Editorial
Decoding Adolescent Decision Making: Neurocognitive Processes, Risk Perception, and the Influence of Peers
by Luca Cerniglia and Ileana Di Pomponio
Adolescents 2024, 4(2), 222-225; https://doi.org/10.3390/adolescents4020015 (registering DOI) - 30 Apr 2024
Abstract
Investigating the neurocognitive mechanisms behind implicit risk assessment and decision making in adolescents is crucial for understanding the intricate array of behaviors typical of this developmental phase [...] Full article
(This article belongs to the Special Issue Implicit Measures of Risky Behaviors in Adolescence)
13 pages, 2407 KiB  
Article
Extracellular Vesicles in Environmental Toxicological Studies: Association between Urinary Concentrations of Phthalate Metabolites and Exosomal miRNA Expression Profiles
by Paolo Cocci, Danilo Bondi, Carmen Santangelo, Tiziana Pietrangelo, Vittore Verratti, Angelo Cichelli, Giovanni Caprioli, Franks Kamgang Nzekoue, Manuella Lesly Kouamo Nguefang, Gianni Sagratini, Gilberto Mosconi and Francesco Alessandro Palermo
Int. J. Mol. Sci. 2024, 25(9), 4876; https://doi.org/10.3390/ijms25094876 (registering DOI) - 30 Apr 2024
Abstract
Phthalates are chemical compounds, mainly used as additives in plastics, which are known to induce harmful impacts to the environment and human health due to their ability to act as hormone-mimics. Few studies have been reported on the relationship between human exposure to [...] Read more.
Phthalates are chemical compounds, mainly used as additives in plastics, which are known to induce harmful impacts to the environment and human health due to their ability to act as hormone-mimics. Few studies have been reported on the relationship between human exposure to phthalates and the level of circulating microRNAs (miRs), especially those miRs encapsulated in extracellular vesicles/exosomes or exosome-like vesicles (ELVs). We examined the relationship of ELV-miR expression patterns and urine of adult men with five phthalate metabolites (i.e., mono isobutyl phthalate, mono-n-butyl phthalate, mono benzyl phthalate, mono-(2-ethyl-5-oxohexyl) phthalate, mono-(2-ethylhexyl) phthalate) to identify potential biomarkers and relevant pathways. We found significant positive associations which were further confirmed by multivariable analysis. Overall, our analyses showed that the Σ phthalate metabolite concentration was associated with a significant increase in the expression level of two miRs found in ELV: miR-202 and miR-543. Different pathways including cancer and immune-related responses were predicted to be involved in this relationship. Analyzing the specific downstream target genes of miR-202 and miR-543, we identified the phosphatase and tensin homolog (PTEN) as the key gene in several converging pathways. In summary, the obtained results demonstrate that exposure to environmental phthalates could be related to altered expression profiles of specific ELV-miRs in adult men, thereby demonstrating the potential of miRs carried by exosomes to act as early effect biomarkers. Full article
(This article belongs to the Special Issue Toxicity Mechanism of Emerging Pollutants)
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10 pages, 400 KiB  
Article
Factors Associated with Self-Reported Voice Change in the Hospitalized Burn Population: A Burn Model System National Database Study
by Kaitlyn L. Chacon, Edward Santos, Kara McMullen, Lauren J. Shepler, Carla Tierney-Hendricks, Audra T. Clark, Chiaka Akarichi, Haig A. Yenikomshian, Caitlin M. Orton, Colleen M. Ryan and Jeffrey C. Schneider
Eur. Burn J. 2024, 5(2), 116-125; https://doi.org/10.3390/ebj5020010 (registering DOI) - 30 Apr 2024
Abstract
Voice plays a prominent role in verbal communication and social interactions. Acute burn care often includes intubation, mechanical ventilation, and tracheostomy, which could potentially impact voice quality. However, the issue of long-term dysphonia remains underexplored. This study investigates long-term self-reported voice changes in [...] Read more.
Voice plays a prominent role in verbal communication and social interactions. Acute burn care often includes intubation, mechanical ventilation, and tracheostomy, which could potentially impact voice quality. However, the issue of long-term dysphonia remains underexplored. This study investigates long-term self-reported voice changes in individuals with burn injuries, focusing on the impact of acute burn care interventions. Analyzing data from a multicenter longitudinal database (2015–2023), self-reported vocal changes were examined at discharge and 6, 12, 24, and 60 months after injury. Out of 582 participants, 65 reported voice changes at 12 months. Changes were prevalent at discharge (16.4%) and persisted over 60 months (11.6–12.7%). Factors associated with voice changes included flame burn, inhalation injury, tracheostomy, outpatient speech-language pathology, head/neck burn, larger burn size, mechanical ventilation, and more ventilator days (p < 0.001). For those on a ventilator more than 21 days, 48.7% experience voice changes at 12 months and 83.3% had received a tracheostomy. The regression analysis demonstrates that individuals that were placed on a ventilator and received a tracheostomy were more likely to report a voice change at 12 months. This study emphasizes the need to understand the long-term voice effects of intubation and tracheostomy in burn care. Full article
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9 pages, 268 KiB  
Communication
Potentiation of the Antimicrobial Effect of Oxytetracycline Combined with Cinnamon, Clove, Oregano, and Red Thyme Essential Oils against MDR Salmonella enterica Strains
by Belén Huerta Lorenzo, Ángela Galán-Relaño, Emilio Barba-Sánchez, Antonio Romero-Salmoral, Ana L. Solarte Portilla, Lidia Gómez-Gascón and Rafael J. Astorga Márquez
Animals 2024, 14(9), 1347; https://doi.org/10.3390/ani14091347 (registering DOI) - 30 Apr 2024
Abstract
Tetracyclines have a high resistance percentage in Salmonella spp. of both human and animal origin. Essential oils, such as cinnamon (Cinnamomum zeylanicum), clove (Eugenia caryophyllata), oregano (Origanum vulgare), and red thyme (Thymus zygis), have shown [...] Read more.
Tetracyclines have a high resistance percentage in Salmonella spp. of both human and animal origin. Essential oils, such as cinnamon (Cinnamomum zeylanicum), clove (Eugenia caryophyllata), oregano (Origanum vulgare), and red thyme (Thymus zygis), have shown bactericidal activity against this bacterium. However, in many cases, the minimum inhibitory concentration (MIC) exceeds the cytotoxicity limits. The objective of this study was to assess the in vitro efficacy of combining oxytetracycline with essential these oils against field multidrug-resistant (MDR) Salmonella enterica strains. The MIC of each product was determined using the broth microdilution method. The interaction was evaluated using the checkerboard method, by means of the fractional inhibitory concentration index (FICindex) determination. The results showed a positive interaction (synergy and additivity) between oxytetracycline and the four oils tested, resulting in a reduction in both products’ MICs by 2 to 4 times their initial value, in the case of oils, and by 2 to 1024 times in the case of the antibiotic. The combination of oxytetracycline and cinnamon achieved the best results (FICindex 0.5), with a decrease in the antibiotic effective concentration to below the sensitivity threshold (MIC of the combined oxytetracycline 0.5 µg/mL). There was no antagonistic effect in any case, although differences in response were observed depending on the bacterial strain. The results of this study suggest that combining oxytetracycline with cinnamon oil could be an effective alternative for controlling tetracycline-resistant strains of Salmonella. However, its individual use should be further evaluated through in vitro susceptibility tests. Full article
30 pages, 6195 KiB  
Article
Comprehensive Bioinformatic Investigation of TP53 Dysregulation in Diverse Cancer Landscapes
by Ruby Khan, Bakht Pari and Krzysztof Puszynski
Genes 2024, 15(5), 577; https://doi.org/10.3390/genes15050577 (registering DOI) - 30 Apr 2024
Abstract
P53 overexpression plays a critical role in cancer pathogenesis by disrupting the intricate regulation of cellular proliferation. Despite its firmly established function as a tumor suppressor, elevated p53 levels can paradoxically contribute to tumorigenesis, influenced by factors such as exposure to carcinogens, genetic [...] Read more.
P53 overexpression plays a critical role in cancer pathogenesis by disrupting the intricate regulation of cellular proliferation. Despite its firmly established function as a tumor suppressor, elevated p53 levels can paradoxically contribute to tumorigenesis, influenced by factors such as exposure to carcinogens, genetic mutations, and viral infections. This phenomenon is observed across a spectrum of cancer types, including bladder (BLCA), ovarian (OV), cervical (CESC), cholangiocarcinoma (CHOL), colon adenocarcinoma (COAD), diffuse large B-cell lymphoma (DLBC), esophageal carcinoma (ESCA), head and neck squamous cell carcinoma (HNSC), kidney chromophobe (KICH), kidney renal clear cell carcinoma (KIRC), liver hepatocellular carcinoma (LIHC), lung adenocarcinoma (LUAD), lung squamous cell carcinoma (LUSC), and uterine corpus endometrial carcinoma (UCEC). This broad spectrum of cancers is often associated with increased aggressiveness and recurrence risk. Effective therapeutic strategies targeting tumors with p53 overexpression require a comprehensive approach, integrating targeted interventions aimed at the p53 gene with conventional modalities such as chemotherapy, radiation therapy, and targeted drugs. In this extensive study, we present a detailed analysis shedding light on the multifaceted role of TP53 across various cancers, with a specific emphasis on its impact on disease-free survival (DFS). Leveraging data from the TCGA database and the GTEx dataset, along with GEPIA, UALCAN, and STRING, we identify TP53 overexpression as a significant prognostic indicator, notably pronounced in prostate adenocarcinoma (PRAD). Supported by compelling statistical significance (p < 0.05), our analysis reveals the distinct influence of TP53 overexpression on DFS outcomes in PRAD. Additionally, graphical representations of overall survival (OS) underscore the notable disparity in OS duration between tumors exhibiting elevated TP53 expression (depicted by the red line) and those with lower TP53 levels (indicated by the blue line). The hazard ratio (HR) further emphasizes the profound impact of TP53 on overall survival. Moreover, our investigation delves into the intricate TP53 protein network, unveiling genes exhibiting robust positive correlations with TP53 expression across 13 out of 27 cancers. Remarkably, negative correlations emerge with pivotal tumor suppressor genes. This network analysis elucidates critical proteins, including SIRT1, CBP, p300, ATM, DAXX, HSP 90-alpha, Mdm2, RPA70, 14-3-3 protein sigma, p53, and ASPP2, pivotal in regulating cell cycle dynamics, DNA damage response, and transcriptional regulation. Our study underscores the paramount importance of deciphering TP53 dynamics in cancer, providing invaluable insights into tumor behavior, disease-free survival, and potential therapeutic avenues. Full article
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20 pages, 5974 KiB  
Article
Structure–Performance Relationship of Coal-Based Lubricating Base Oils and Sensitivities to Typical Additives
by Junyi Liu, Zhaojun Zhang, Xia Zhou, Wenjing Hu, Renmin Pan and Jiusheng Li
Lubricants 2024, 12(5), 156; https://doi.org/10.3390/lubricants12050156 (registering DOI) - 30 Apr 2024
Abstract
The relationship between the structure characteristics and performances of coal-based hydrogenation isomeric (CTL) base oil and metallocene-catalyzed coal-based poly-alpha-olefin (mPAO) base oil is clarified in this paper. CTL and mPAO were compared with typical petroleum-based and natural gas-based commercial API III and IV [...] Read more.
The relationship between the structure characteristics and performances of coal-based hydrogenation isomeric (CTL) base oil and metallocene-catalyzed coal-based poly-alpha-olefin (mPAO) base oil is clarified in this paper. CTL and mPAO were compared with typical petroleum-based and natural gas-based commercial API III and IV base oils. Pressurized differential scanning calorimetry (PDSC), the rotary bomb oxidation test (RBOT), and a four-ball friction tester were used to evaluate the oxidation stability and lubrication performance of base oils under different working conditions. The sensitivity of different base oils to typical antioxidants and extreme-pressure antiwear agents was compared. In particular, the composition and structure of CTL base oil are clearly different from GTL and mineral base oil. The coal-based CTL and mPAO base oils exhibit commendable viscosity–temperature properties, coupled with low-temperature fluidity, fire safety, and minimal evaporation loss. The lubricating properties, oxidation stability, and sensitivity to extreme-pressure antiwear agents of CTL are close to those of similar base oils. However, the sensitivity of CTL to typical antioxidants is relatively poor. In addition, compared with commercial PAO base oil, mPAO has a lower isomerization degree and fewer isomerization types. The oxidation stability and sensitivity to typical antioxidants of mPAO base oil are comparable with those of commercial PAO base oil, while its lubrication performance and sensitivity to typical extreme-pressure antiwear agents are significantly better than those of commercial PAO base oil. Full article
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14 pages, 4983 KiB  
Article
Design, Modeling, and Experimental Validation of an Active Microcatheter Driven by Shape Memory Effects
by Chengyang Li, Xu Zhang, Zhongjing Ren, Jingkai Wang, Shouyu Sun, Jian Fu, Yang Xu and Wu Duan
Micromachines 2024, 15(5), 603; https://doi.org/10.3390/mi15050603 (registering DOI) - 30 Apr 2024
Abstract
Microcatheters capable of active guidance have been proven to be effective and efficient solutions to interventional surgeries for cardiovascular and cerebrovascular diseases. Herein, a novel microcatheter made of two biocompatible materials, shape memory alloy (SMA) and polyethylene (PE), is proposed. It consists of [...] Read more.
Microcatheters capable of active guidance have been proven to be effective and efficient solutions to interventional surgeries for cardiovascular and cerebrovascular diseases. Herein, a novel microcatheter made of two biocompatible materials, shape memory alloy (SMA) and polyethylene (PE), is proposed. It consists of a reconfigurable distal actuator and a separate polyethylene catheter. The distal actuator is created via embedding U-shape SMA wires into the PE base, and its reconfigurability is mainly dominated by the shape memory effect (SME) of SMA wires, as well as the effect of thermal mismatch between the SMA and PE base. A mathematical model was established to predict the distal actuator’s deformation, and the analytical solutions show great agreement with the finite element results. Structural optimization of such microcatheters was carried out using the verified analytical model, followed by fabrication of some typical prototypes. Experimental testing of their mechanical behaviors demonstrates the feasibility of the structural designs, and the reliability and accuracy of the mathematical model. The active microcatheter, together with the prediction model, will lay a solid foundation for rapid development and optimization of active navigation strategies for vascular interventions. Full article
(This article belongs to the Special Issue N/MEMS Intelligent Structures: Design, Manufacturing, and Control)
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18 pages, 1153 KiB  
Review
Non-Classical Effects of FGF23: Molecular and Clinical Features
by Luis Martínez-Heredia, Juan Manuel Canelo-Moreno, Beatriz García-Fontana and Manuel Muñoz-Torres
Int. J. Mol. Sci. 2024, 25(9), 4875; https://doi.org/10.3390/ijms25094875 (registering DOI) - 30 Apr 2024
Abstract
This article reviews the role of fibroblast growth factor 23 (FGF23) protein in phosphate metabolism, highlighting its regulation of vitamin D, parathyroid hormone, and bone metabolism. Although it was traditionally thought that phosphate–calcium homeostasis was controlled exclusively by parathyroid hormone (PTH) and calcitriol, [...] Read more.
This article reviews the role of fibroblast growth factor 23 (FGF23) protein in phosphate metabolism, highlighting its regulation of vitamin D, parathyroid hormone, and bone metabolism. Although it was traditionally thought that phosphate–calcium homeostasis was controlled exclusively by parathyroid hormone (PTH) and calcitriol, pathophysiological studies revealed the influence of FGF23. This protein, expressed mainly in bone, inhibits the renal reabsorption of phosphate and calcitriol formation, mediated by the α-klotho co-receptor. In addition to its role in phosphate metabolism, FGF23 exhibits pleiotropic effects in non-renal systems such as the cardiovascular, immune, and metabolic systems, including the regulation of gene expression and cardiac fibrosis. Although it has been proposed as a biomarker and therapeutic target, the inhibition of FGF23 poses challenges due to its potential side effects. However, the approval of drugs such as burosumab represents a milestone in the treatment of FGF23-related diseases. Full article
(This article belongs to the Collection Feature Paper Collection in Biochemistry)
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15 pages, 8593 KiB  
Article
The Significance of the 98th Amino Acid in GP2a for Porcine Reproductive and Respiratory Syndrome Virus Adaptation in Marc-145 Cells
by Yao Chen, Zhantang Huo, Qi Jiang, Zhiheng Qiu, Zheng Shao, Chunquan Ma, Guihong Zhang and Qi Li
Viruses 2024, 16(5), 711; https://doi.org/10.3390/v16050711 (registering DOI) - 30 Apr 2024
Abstract
Porcine reproductive and respiratory syndrome virus (PRRSV) is one of the most important pathogens in the pig industry. Marc-145 cells are widely used for PRRSV isolation, vaccine production, and investigations into virus biological characteristics. Despite their significance in PRRSV research, Marc-145 cells struggle [...] Read more.
Porcine reproductive and respiratory syndrome virus (PRRSV) is one of the most important pathogens in the pig industry. Marc-145 cells are widely used for PRRSV isolation, vaccine production, and investigations into virus biological characteristics. Despite their significance in PRRSV research, Marc-145 cells struggle to isolate specific strains of the North American virus genotype (PRRSV-2). The involvement of viral GP2a, GP2b, and GP3 in this phenomenon has been noted. However, the vital amino acids have not yet been identified. In this study, we increased the number of blind passages and successfully isolated two strains that were previously difficult to isolate with Marc-145 cells. Both strains carried an amino acid substitution in GP2a, specifically phenylalanine to leucine at the 98th amino acid position. Through a phylogenetic and epidemiologic analysis of 32 strains, those that were not amenable to isolation widely exhibited this mutation. Then, by using the PRRSV reverse genetics system, IFA, and Western blotting, we identified the mutation that could affect the tropism of PRRSV-2 for Marc-145 cells. Furthermore, an animal experiment was conducted. Through comparisons of clinical signs, mortality rates, and viral load in the organs and sera, we found that mutation did not affect the pathogenicity of PRRSV-2. In conclusion, our study firmly establishes the 98th amino acid in GP2a as a key determinant of PRRSV-2 tropism for Marc-145 cells. Full article
(This article belongs to the Section Animal Viruses)
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17 pages, 7237 KiB  
Data Descriptor
A Comprehensive Dataset of the Aerodynamic and Geometric Coefficients of Airfoils in the Public Domain
by Kanak Agarwal, Vedant Vijaykrishnan, Dyutit Mohanty and Manikandan Murugaiah
Data 2024, 9(5), 64; https://doi.org/10.3390/data9050064 (registering DOI) - 30 Apr 2024
Abstract
This study presents an extensive collection of data on the aerodynamic behavior at a low Reynolds number and geometric coefficients for 2900 airfoils obtained through the class shape transformation (CST) method. By employing a verified OpenFOAM-based CFD simulation framework, lift and drag coefficients [...] Read more.
This study presents an extensive collection of data on the aerodynamic behavior at a low Reynolds number and geometric coefficients for 2900 airfoils obtained through the class shape transformation (CST) method. By employing a verified OpenFOAM-based CFD simulation framework, lift and drag coefficients were determined at a Reynolds number of 105. Considering the limited availability of data on low Reynolds number airfoils, this dataset is invaluable for a wide range of applications, including unmanned aerial vehicles (UAVs) and wind turbines. Additionally, the study offers a method for automating CFD simulations that could be applied to obtain aerodynamic coefficients at higher Reynolds numbers. The breadth of this dataset also supports the enhancement and creation of machine learning (ML) models, further advancing research into the aerodynamics of airfoils and lifting surfaces. Full article
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16 pages, 6263 KiB  
Article
Implementation and Evaluation of Walk-in-Place Using a Low-Cost Motion-Capture Device for Virtual Reality Applications
by Rawoo Shin, Bogyu Choi, Sang-Min Choi and Suwon Lee
Sensors 2024, 24(9), 2848; https://doi.org/10.3390/s24092848 (registering DOI) - 30 Apr 2024
Abstract
Virtual reality (VR) is used in many fields, including entertainment, education, training, and healthcare, because it allows users to experience challenging and dangerous situations that may be impossible in real life. Advances in head-mounted display technology have enhanced visual immersion, offering content that [...] Read more.
Virtual reality (VR) is used in many fields, including entertainment, education, training, and healthcare, because it allows users to experience challenging and dangerous situations that may be impossible in real life. Advances in head-mounted display technology have enhanced visual immersion, offering content that closely resembles reality. However, several factors can reduce VR immersion, particularly issues with the interactions in the virtual world, such as locomotion. Additionally, the development of locomotion technology is occurring at a moderate pace. Continuous research is being conducted using hardware such as treadmills, and motion tracking using depth cameras, but they are costly and space-intensive. This paper presents a walk-in-place (WIP) algorithm that uses Mocopi, a low-cost motion-capture device, to track user movements in real time. Additionally, its feasibility for VR applications was evaluated by comparing its performance with that of a treadmill using the absolute trajectory error metric and survey data collected from human participants. The proposed WIP algorithm with low-cost Mocopi exhibited performance similar to that of the high-cost treadmill, with significantly positive results for spatial awareness. This study is expected to contribute to solving the issue of spatial constraints when experiencing infinite virtual spaces. Full article
(This article belongs to the Section Navigation and Positioning)
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13 pages, 2261 KiB  
Article
De Novo Assembly, Characterization, and Comparative Transcriptome Analysis of Mature Male and Female Gonads of Rabbitfish (Siganus oramin) (Bloch & Schneider, 1801)
by Xiaolin Huang, Zhong Huang, Qiang Li, Wenjun Li, Chong Han, Yukai Yang, Heizhao Lin, Qiaer Wu and Yanbo Zhou
Animals 2024, 14(9), 1346; https://doi.org/10.3390/ani14091346 (registering DOI) - 30 Apr 2024
Abstract
The rabbitfish, Siganus oramin, is a commercially important table fish in southeastern China. However, there have been few studies on its gonad development and reproduction regulation. Comparative transcriptome analysis was first performed on adult male and female gonads of S. oramin. [...] Read more.
The rabbitfish, Siganus oramin, is a commercially important table fish in southeastern China. However, there have been few studies on its gonad development and reproduction regulation. Comparative transcriptome analysis was first performed on adult male and female gonads of S. oramin. In total, 47,070 unigenes were successfully assembled and 22,737 unigenes were successfully annotated. Through comparative transcriptome analysis of male and female gonads, a total of 6722 differentially expressed genes were successfully identified, with 3528 upregulated genes and 3154 downregulated genes in the testes. In addition, 39 differentially expressed reproduction-related genes were identified. Finally, quantitative real-time PCR was used to validate the expression levels of several differentially expressed genes. These results provide important data for further studying the function of reproduction-related genes and the molecular mechanism regulating gonad development and reproduction in S. oramin. Full article
(This article belongs to the Section Animal Physiology)
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10 pages, 222 KiB  
Article
A Comprehensive Analysis of Renal and Endothelium Dysfunction Markers Fourteen Years after Hemorrhagic Fever with Renal Syndrome Contraction
by Dragan Ledina, Ivo Ivić, Ante Tadin, Kristian Bodulić, James W. LeDuc and Alemka Markotić
Life 2024, 14(5), 575; https://doi.org/10.3390/life14050575 (registering DOI) - 30 Apr 2024
Abstract
While the pathology of acute hemorrhagic fever with renal syndrome (HFRS) has been widely researched, details on the chronic HFRS sequelae remain mainly unexplored. In this study, we analyzed the clinical and laboratory characteristics of 30 convalescent HFRS patients 14 years after the [...] Read more.
While the pathology of acute hemorrhagic fever with renal syndrome (HFRS) has been widely researched, details on the chronic HFRS sequelae remain mainly unexplored. In this study, we analyzed the clinical and laboratory characteristics of 30 convalescent HFRS patients 14 years after the disease contraction, mainly emphasizing several endothelial dysfunction parameters. Convalescent HFRS patients exhibited significantly higher serum levels of erythrocyte sedimentation rate, von Willebrand factor, uric acid, C-reactive protein and immunoglobulin A when compared to healthy individuals. Furthermore, 24 h urine analyses revealed significantly lower sodium and potassium urine levels, as well as significantly higher proteinuria, microalbumin levels and β2-microglobulin levels when compared to healthy individuals. First morning urine analysis revealed significantly higher levels of hematuria in convalescent HFRS patients. None of the additional analyzed endothelium dysfunction markers were significantly different in post-HFRS patients and healthy individuals, including serum and urine P-selectin, E-selectin, soluble intercellular adhesion molecule 1, vascular intercellular adhesion molecule 1 (sVCAM-1) and vascular endothelial growth factor (VEGF). However, binary logistic regression revealed a weak association of serum sVCAM-1 and urine VEGF levels with HFRS contraction. Generally, our findings suggest mild chronic inflammation and renal dysfunction levels in convalescent HFRS patients 14 years after the disease contraction. Full article
(This article belongs to the Special Issue Emerging and Re-emerging Zoonotic Infectious Diseases)
11 pages, 1186 KiB  
Communication
Chemerin Levels in Individuals with Type 2 Diabetes and a Normal Weight versus Individuals with Type 2 Diabetes and Obesity: An Observational, Cross-Sectional Study
by Aishee B. Mukherji, Victoria Idowu, Lei Zhao, Lawrence L. K. Leung, Sa Shen, Latha Palaniappan and John Morser
Biomedicines 2024, 12(5), 983; https://doi.org/10.3390/biomedicines12050983 (registering DOI) - 30 Apr 2024
Abstract
Chemerin acts as both a chemotactic agent and an adipokine that undergoes proteolytic cleavage, converting inactive precursors into their active forms before being subsequently inactivated. Elevated chemerin levels are linked to obesity and type 2 diabetes mellitus (T2D). This study aimed to elucidate [...] Read more.
Chemerin acts as both a chemotactic agent and an adipokine that undergoes proteolytic cleavage, converting inactive precursors into their active forms before being subsequently inactivated. Elevated chemerin levels are linked to obesity and type 2 diabetes mellitus (T2D). This study aimed to elucidate the effects of T2D and obesity on chemerin levels by comparing plasma samples from individuals with a normal weight and T2D (BMI < 25; NWD group n = 22) with those from individuals who are overweight or obese and have T2D (BMI ≥ 25; OWD group n = 39). The total chemerin levels were similar in the NWD and OWD groups, suggesting that T2D may equalize the chemerin levels irrespective of obesity status. The cleavage of chemerin has been previously linked to myocardial infarction and stroke in NWD, with potential implications for inflammation and mortality. OWD plasma exhibited lower levels of cleaved chemerin than the NWD group, suggesting less inflammation in the OWD group. Here, we showed that the interaction between obesity and T2D leads to an equalization in the total chemerin levels. The cleaved chemerin levels and the associated inflammatory state, however, differ significantly, underscoring the complex relationship between chemerin, T2D, and obesity. Full article
(This article belongs to the Special Issue Recent Advances in Adipokines—2nd Edition)
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18 pages, 1528 KiB  
Article
Deep Learning-Based Detection of Glottis Segmentation Failures
by Armin A. Dadras and Philipp Aichinger
Bioengineering 2024, 11(5), 443; https://doi.org/10.3390/bioengineering11050443 (registering DOI) - 30 Apr 2024
Abstract
Medical image segmentation is crucial for clinical applications, but challenges persist due to noise and variability. In particular, accurate glottis segmentation from high-speed videos is vital for voice research and diagnostics. Manual searching for failed segmentations is labor-intensive, prompting interest in automated methods. [...] Read more.
Medical image segmentation is crucial for clinical applications, but challenges persist due to noise and variability. In particular, accurate glottis segmentation from high-speed videos is vital for voice research and diagnostics. Manual searching for failed segmentations is labor-intensive, prompting interest in automated methods. This paper proposes the first deep learning approach for detecting faulty glottis segmentations. For this purpose, faulty segmentations are generated by applying both a poorly performing neural network and perturbation procedures to three public datasets. Heavy data augmentations are added to the input until the neural network’s performance decreases to the desired mean intersection over union (IoU). Likewise, the perturbation procedure involves a series of image transformations to the original ground truth segmentations in a randomized manner. These data are then used to train a ResNet18 neural network with custom loss functions to predict the IoU scores of faulty segmentations. This value is then thresholded with a fixed IoU of 0.6 for classification, thereby achieving 88.27% classification accuracy with 91.54% specificity. Experimental results demonstrate the effectiveness of the presented approach. Contributions include: (i) a knowledge-driven perturbation procedure, (ii) a deep learning framework for scoring and detecting faulty glottis segmentations, and (iii) an evaluation of custom loss functions. Full article
(This article belongs to the Special Issue Models and Analysis of Vocal Emissions for Biomedical Applications)
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19 pages, 3583 KiB  
Article
Green and Efficient Extraction of Phenolic Components from Plants with Supramolecular Solvents: Experimental and Theoretical Studies
by Bo-Hou Xia, Zhi-Lu Yu, Yu-Ai Lu, Shi-Jun Liu, Ya-Mei Li, Ming-Xia Xie and Li-Mei Lin
Molecules 2024, 29(9), 2067; https://doi.org/10.3390/molecules29092067 (registering DOI) - 30 Apr 2024
Abstract
The supramolecular solvent (SUPRAS) has garnered significant attention as an innovative, efficient, and environmentally friendly solvent for the effective extraction and separation of bioactive compounds from natural resources. However, research on the use of a SUPRAS for the extraction of phenolic compounds from [...] Read more.
The supramolecular solvent (SUPRAS) has garnered significant attention as an innovative, efficient, and environmentally friendly solvent for the effective extraction and separation of bioactive compounds from natural resources. However, research on the use of a SUPRAS for the extraction of phenolic compounds from plants, which are highly valued in food products due to their exceptional antioxidant properties, remains scarce. The present study developed a green, ultra-sound-assisted SUPRAS method for the simultaneous determination of three phenolic acids in Prunella vulgaris using high-performance liquid chromatography (HPLC). The experimental parameters were meticulously optimized. The efficiency and antioxidant properties of the phenolic compounds obtained using different extraction methods were also compared. Under optimal conditions, the extraction efficiency of the SUPRAS, prepared with octanoic acid reverse micelles dispersed in ethanol–water, significantly exceeded that of conventional organic solvents. Moreover, the SUPRAS method demonstrated greater antioxidant capacity. Confocal laser scanning microscopy (CLSM) images revealed the spherical droplet structure of the SUPRAS, characterized by a well-defined circular fluorescence position, which coincided with the position of the phenolic acids. The phenolic acids were encapsulated within the SUPRAS droplets, indicating their efficient extraction capacity. Furthermore, molecular dynamics simulations combined with CLSM supported the proposed method’s mechanism and theoretically demonstrated the superior extraction performance of the SUPRAS. In contrast to conventional methods, the higher extraction efficiency of the SUPRAS can be attributed to the larger solvent contact surface area, the formation of more types of hydrogen bonds between the extractants and the supramolecular solvents, and stronger, more stable interaction forces. The results of the theoretical studies corroborate the experimental outcomes. Full article
(This article belongs to the Special Issue Recent Advances in Green Solvents II)
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16 pages, 6279 KiB  
Article
Microbial Mineralization-Based Rapid and High-Strength Simultaneous Repair of Surrounding Rock Fracture Zones and Lining Cracks
by Rongzheng Zhang, Shixia Zhang, Zhichao Song, Danyi Shen and Chuangzhou Wu
Sustainability 2024, 16(9), 3751; https://doi.org/10.3390/su16093751 (registering DOI) - 30 Apr 2024
Abstract
Grouting technology based on microbial mineralization represents a novel approach to enhancing the properties of rock and soil. Widely studied for its combination of high efficiency and environmental friendliness, this method improves the strength and permeability of rock and soil. In this study, [...] Read more.
Grouting technology based on microbial mineralization represents a novel approach to enhancing the properties of rock and soil. Widely studied for its combination of high efficiency and environmental friendliness, this method improves the strength and permeability of rock and soil. In this study, a novel approach involving bioslurry + filling particles was proposed to reinforce sand columns. It was observed that the addition of filling particles provided new nucleation sites for crystallization, significantly enhancing the cementation effect of sand particles. After 3 days of grouting treatment, sand columns containing 10% filling particles exhibited an order of magnitude reduction in permeability with the unconfined compressive strength (UCS) reaching 2.5 MPa, more than twice that of sand columns reinforced with bioslurry alone. Additionally, this study presented a method for the simultaneous repair of sand particles and concrete cracks. Results indicated that after 3 days of the grouting treatment, the interfacial shear strength between sand columns and concrete reached 100 kPa. Moreover, for concrete with crack apertures less than 1 mm, the permeability coefficient was reduced by over 80%, while the recovery ratio of the splitting tensile strength reached 64.2%. These findings highlight the potential of microbial mineralized grouting technology in addressing practical challenges, providing a foundation for the rapid and high-strength simultaneous repair of tunnel-surrounding rock fracture zones and lining cracks. Full article
(This article belongs to the Special Issue Sustainable Geotechnical Engineering)
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19 pages, 5941 KiB  
Article
Multiplicative Improved Coherence Factor Delay Multiply and Sum Algorithm for Clutter Removal in a Microwave Breast Tumor Imaging System
by Donghao Guo, Jingjing Wang, Huanqing Liu, Yuxi Bai, Yongcheng Li and Weihao Liu
Appl. Sci. 2024, 14(9), 3820; https://doi.org/10.3390/app14093820 (registering DOI) - 30 Apr 2024
Abstract
In the medical field, microwave imaging technology has experienced rapid development due to its non-invasive and non-radioactive nature. The confocal algorithm is a method commonly used for microwave breast cancer imaging, with the key objective of removing clutter in images to achieve high-quality [...] Read more.
In the medical field, microwave imaging technology has experienced rapid development due to its non-invasive and non-radioactive nature. The confocal algorithm is a method commonly used for microwave breast cancer imaging, with the key objective of removing clutter in images to achieve high-quality results. However, the current methods are facing challenges in removing clutter. In order to reduce the clutter in images, a multiplicative improved coherence factor delay multiply and sum algorithm based on the maximum interclass differencing method is proposed. The algorithm compares the starting and ending moments of tumor signals in different channels to determine whether the tumor-scattered signals in different channels overlap in time. An improved coherence coefficient is obtained by summing the non-overlapping signals and multiplying the time window. The multiplicative improved coherence factor, which is obtained by multiplying the coherence coefficients of the improved multi-pair signals, is then multiplied by the focal point intensity obtained using the delay multiply and sum algorithm to reduce clutter in an image. To evaluate the performance of the proposed algorithm, several low-cost uniform and non-uniform models of human breast and tumor tissue with dielectric properties were prepared for testing. The experimental results show that, compared to the existing algorithm, the proposed algorithm can greatly reduce the clutter in images, with a signal-to-clutter ratio of at least 4 dB higher as well as contrast at least six-fold higher. Full article
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14 pages, 5111 KiB  
Article
Distribution Pattern of Species Richness of Endemic Genera in Mountainous Areas of Southwest China and Its Influencing Factors
by Aoxiang Chang, Ting Wu, Bowen Li, Dezhi Jiao, Yushu Wang, Dan He, Zihan Jiang and Zhenyu Fan
Sustainability 2024, 16(9), 3750; https://doi.org/10.3390/su16093750 (registering DOI) - 30 Apr 2024
Abstract
China’s southwest mountainous region is one of the hotspots of biodiversity in the world. However, the study on the pattern of species richness distribution of endemic plants in this region and its influencing factors is still in the exploration stage. A clear regional [...] Read more.
China’s southwest mountainous region is one of the hotspots of biodiversity in the world. However, the study on the pattern of species richness distribution of endemic plants in this region and its influencing factors is still in the exploration stage. A clear regional spatial distribution pattern of plants and its influencing factors are very important for the protection and management of plant diversity in southwest China. In this study, 511 county-level regions in the southwest mountainous region were taken as examples to establish a plant species resource bank in the southwest mountainous region, and the distribution pattern of the proportion and abundance of endemic plant families and genera was analyzed based on 19 climate and environmental factors and 8 human disturbance factors in the southwest mountainous region. The geographical weighted regression model (GWR) was used to reveal the main factors affecting the spatial distribution of species. The results showed that: (1) A total of 4688 species investigated in the southwest mountain belong to 19 families and 32 genera. (2) The endemic species richness in the southwest mountainous region showed a significant uneven spatial pattern, mainly concentrated in the Heng Duan Mountain area, southwest Sichuan and northern Yunnan area, and the Ruoergai-Hongyuan area of West Sichuan Plateau. (3) The results of the GWR model showed that the diurnal mean temperature range, precipitation seasonality and distance from the main road had significant effects on species richness. The study on the distribution of endemic genera and their influencing factors in the southwest mountainous region has important implications for the exploration of the evolutionary history and species conservation of the mountain flora. Full article
(This article belongs to the Special Issue Biodiversity, Biologic Conservation and Ecological Sustainability)
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16 pages, 3442 KiB  
Article
Research on a Biofilter for a Typical Application Scenario in China: Treatment of Pesticide Residue Wastewater in Orchards
by Jin Zeng, Quanchun Yuan, Wenzhi Xu, Hailong Li, Menghui Li, Xiaohui Lei, Wei Wang, Qiang Lin, Xue Li, Rui Xu and Xiaolan Lyu
Agronomy 2024, 14(5), 934; https://doi.org/10.3390/agronomy14050934 (registering DOI) - 30 Apr 2024
Abstract
To reduce pesticide pollution and promote sustainable agricultural development in China, we designed a pilot-scale biofilter system to treat residual imidacloprid wastewater in an orchard. The biofilter system demonstrated a high rate of removal of imidacloprid from the biodegradation wastewater, with removal rates [...] Read more.
To reduce pesticide pollution and promote sustainable agricultural development in China, we designed a pilot-scale biofilter system to treat residual imidacloprid wastewater in an orchard. The biofilter system demonstrated a high rate of removal of imidacloprid from the biodegradation wastewater, with removal rates from the outlet exceeding 99% at different concentrations of pesticides. Among environmental factors, imidacloprid concentration at the inlet and biomixture significantly affected the activity of imidacloprid-degrading bacteria. The dominant microbial communities during the stable operation of the biofilter system included Firmicutes, Actinobacteria, Proteobacteria, and Bacteroidetes at the phylum level and Bacillus, Methylobacter, and unclassified_f__Microbacteriaceae at the genus level. In future initiatives to improve biofilter performance and applicability, increasing attention should be paid to the dominant microbial communities, the number of biofilter units, and important environmental factors. Orchard workers in China should improve the existing treatment of residual pesticide wastewater to mitigate agricultural non-point source pollution. Full article
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13 pages, 2531 KiB  
Article
Study on the Skincare Effects of Red Rice Fermented by Aspergillus oryzae In Vitro
by Mo Chen, Yi Sun, Le Zhu, Lingyu Li and Ya Zhao
Molecules 2024, 29(9), 2066; https://doi.org/10.3390/molecules29092066 (registering DOI) - 30 Apr 2024
Abstract
Red rice, a variety of pigmented grain, serves dual purposes as both a food and medicinal resource. In recent years, we have witnessed an increasing interest in the dermatological benefits of fermented rice extracts, particularly their whitening and hydrating effects. However, data on [...] Read more.
Red rice, a variety of pigmented grain, serves dual purposes as both a food and medicinal resource. In recent years, we have witnessed an increasing interest in the dermatological benefits of fermented rice extracts, particularly their whitening and hydrating effects. However, data on the skincare advantages derived from fermenting red rice with Aspergillus oryzae remain sparse. This study utilized red rice as a substrate for fermentation by Aspergillus oryzae, producing a substance known as red rice Aspergillus oryzae fermentation (RRFA). We conducted a preliminary analysis of RRFA’s composition followed by an evaluation of its skincare potential through various in vitro tests. Our objective was to develop a safe and highly effective skincare component for potential cosmetic applications. RRFA’s constituents were assessed using high-performance liquid chromatography (HPLC), Kjeldahl nitrogen determination, the phenol-sulfuric acid method, and enzyme-linked immunosorbent assay (ELISA). We employed human dermal fibroblasts (FB) to assess RRFA’s anti-aging and antioxidative properties, immortalized keratinocytes (HaCaT cells) and 3D epidermal models to examine its moisturizing and reparative capabilities, and human primary melanocytes (MCs) to study its effects on skin lightening. Our findings revealed that RRFA encompasses several bioactive compounds beneficial for skin health. RRFA can significantly promote the proliferation of FB cells. And it markedly enhances the mRNA expression of ECM-related anti-aging genes and reduces reactive oxygen species production. Furthermore, RRFA significantly boosts the expression of Aquaporin 3 (AQP3), Filaggrin (FLG), and Hyaluronan Synthase 1 (HAS1) mRNA, alongside elevating moisture levels in a 3D epidermal model. Increases were also observed in the mRNA expression of Claudin 1 (CLDN1), Involucrin (IVL), and Zonula Occludens-1 (ZO-1) in keratinocytes. Additionally, RRFA demonstrated an inhibitory effect on melanin synthesis. Collectively, RRFA contains diverse ingredients which are beneficial for skin health and showcases multifaceted skincare effects in terms of anti-aging, antioxidant, moisturizing, repairing, and whitening capabilities in vitro, highlighting its potential for future cosmetic applications. Full article
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