Abstract
Previously, we established experimental conditions allowing us to induce hypomethylation of tandem arrays of highly repetitive DNA sequences in the Nicotiana tabacum L. nuclear genome (M. Bezděk et al. 1991, Planta 184, 487–490). In this paper, we demonstrate that loci containing the highly repetitive sequences of the HRS60 family can maintain the induced hypomethylated state through protoplast regeneration, non-differentiated callus growth, and plant regeneration. The hypomethylation, induced with 5-azacytidine and monitored on these sequences, did not substantially alter the capacity of calli to produce plants. It can be concluded that, in contradistinction of multiple copies of transgenes or ectopic genes which are usually recognized as methylation targets, endogenous tandem repeats, such as the HRS60, present at 105 copies in the genome, can escape de-novo methylation.
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Abbreviations
- AzaC:
-
5-azacytidine
References
Adams, R.L.P., Burdon, R.H. (1985) Molecular biology of DNA methylation. Springer, New York
Amasino, R.M., Powell, A.L.T., Gordon, M.P. (1984) Changes in T-DNA methylation and expression are associated with variation and plant regeneration in a crown gall tumour line. Mol. Gen. Genet. 197, 437–446
Antequera, F., Bird, A.P. (1988) Unmethylated CpG islands associated with genes in higher plant DNA. EMBO J. 7, 2295–2299
Barry, C., Faugeron, G., Rossignol, J.-L. (1993) Methylation induced premeiotically in Ascobollus: Coextension with DNA repeat lengths and effect on transcript elongation. Proc. Natl. Acad. Sci. USA 90, 4551–4561
Bezděk, M., Koukalová, B., Brzobohatý, B., Vyskot, B. (1991) 5-Azacytidine induced hypomethylation of tobacco HRS60 tandem DNA repeats in tissue culture. Planta 184, 487–490
Bird, A.P. (1986) CpG-rich islands and the function of DNA methylation. Nature 321, 209–213
Fajkus, J., Reich, J. (1991) Evaluation of restriction endonuclease cleavage of plant nuclear DNA using contaminating chloroplast DNA. Folia Biol. (Prague) 37, 224–226
Fajkus, J., Vyskot, B., Bezděk, M. (1992) Changes in chromatin structure induced with 5-azacytidine or dl-ethionine. FEBS Lett. 314, 13–16
Flavell, R.B., O'Dell, M. (1990) Variation and inheritance of cytosine methylation patterns in wheat at the high molecular weight glutein and ribosomal RNA gene loci. Development 1990 Suppl., 15–20
Gruenbaum, Y., Naveh-Many, T., Cedar, H., Razin, A. (1981) Sequence specificity of methylation in higher plant DNA. Nature 292, 860–862
Koukalová, B., Reich, J., Matyášek, R., Kuhrová, V., Bezděk, M. (1989) A BamHI family of highly repeated DNA sequences of Nicotiana tabacum. Theor. Appl. Genet. 78, 77–80
Koukalová, B., Komarnitsky, I.K., Kuhrová, V. (1993) The distribution of tobacco HRS60 DNA repeated sequences in species of the genus Nicotiana. Plant Sci. 88, 39–44
Maniatis, T., Fritsch, E.F., Sambrook, J. (1982) Molecular cloning: A laboratory manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor
Matyášek, R., Koukalová, B., Reich, J. (1989) Isolation and sequencing of HRS60dim1, a dimeric member of the HRS60-family of a tobacco DNA repeat. Nucl. Acids Res. 17, 4377
Matzke, M.A., Matzke, A.J.M. (1990) Gene interactions and epigenetic variation in transgenic plants. Dev. Genet. 11, 214–223
Matzke, M.A., Primig, M., Matzke, A.J.M. (1989) Reversible methylation and inactivation of marker genes in sequentially transformed tobacco plants. EMBO J. 8, 643–649
Mehtali, M., LeMeur, M., Lahte, R. (1990) The methylation-free status of a housekeeping gene is lost at high copy number. Gene 91, 179–184
Murashige, T., Skoog, F. (1962) A revised medium for rapid growth and bioassays with tobacco tissue cultures. Physiol. Plant. 15, 473–497
Nagy, J.I., Maliga, P. (1976) Callus induction and plant regeneration from mesophyll protoplasts of Nicotiana sylvestris. Z. Pflanzenphysiol. 78, 453–455
Sano, H., Kamada, I., Youssefian, S., Katssumi, M., Wabiko, H. (1990). A single treatment of rice seedlings with 5-azacytidine induces heritable dwarfism and undermethylation of genomic DNA. Mol. Gen. Genet. 220, 441–447
Selker, E.U. (1990) Premeiotic instability of repeated sequences in Neurospora crassa. Annu. Rev. Genet. 24, 579–613
Vyskot, B., Brzobohatý, B., Karlovská, L., Bezděk, M. (1989) Structural and functional stability of foreign genes in transgenic tobacco plants. Folia Biol. (Prague) 35, 360–372
Weih, F., Nitsch, D., Reik, A., Schutz, G., Becker, P.B. (1991) Analysis of CpG methylation and genomic footprinting at the aminotransferase gene: DNA methylation alone is not sufficient to prevent protein binding in vivo. EMBO J. 10, 2559–2567
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This project was supported by the Grant Agency of the Academy of Sciences of the Czech Republic. We thank Ms. Libuše Jedličková, Ms. Hana Suchánková, and Ms. Emilie Koudelková for technical assistance.
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Koukalová, B., Kuhrová, V., Vyskot, B. et al. Maintenance of the induced hypomethylated state of tobacco nuclear repetitive DNA sequences in the course of protoplast and plant regeneration. Planta 194, 306–310 (1994). https://doi.org/10.1007/BF00197529
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DOI: https://doi.org/10.1007/BF00197529