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Detailed physical and genetic mapping in the region of plasminogen, D17Rp17e, and quaking

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Abstract

We present here a detailed physical map encompassing over 600 kb of mouse Chromosome (Chr) 17 in the region of plasminogen, D17Rp17e, and quaking. This region is cloned in yeast artificial chromosomes (YACs). We have identified several CpG islands within this region from pulsed field gel mapping of mouse genomic DNA and YAC DNA. Five new DNA probes have been generated. One, D17Leh514, is a minimum of about 90 kb distal to plasminogen. Four, D17Leh513, D17Leh512, D17Leh511, and D17Leh510, are proximal to D17Rp17e, the closest previously described genetic marker to quakingviable and quakinglethal-1 mutations. We have genetically mapped D17Leh511 to within 0.15 cM of these mutations. The genetic distance to D17Rp17e from D17Leh511 is also 0.15 cM; the physical distance of less than 360 kb (minimum 200 kb) is consistent with an approximation of 2 Mbp per cM.

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References

  • Barlow, D.P., Stöger, R., Herrmann, B.G., Saito, K., Schweifer, N. (1991). The mouse insulin-like growth factor receptor is imprinted and closely linked to the Tme locus. Nature 349, 84–87.

    Google Scholar 

  • Bennett, W.I., Gall, A.M., Southard, J.L., Sidman, R.L. (1971). Abnormal spermiogenesis in quaking, a myelin-deficient mutant mouse. Biol. Reprod. 5, 30–58.

    Google Scholar 

  • Cox, R.D., Copeland, N.G., Jenkins, N.A., Lehrach, H. (1991). Interspersed repetitive element polymerase chain reaction product mapping using a mouse interspecific backcross. Genomics 10, 375–384.

    Google Scholar 

  • Cox, R.D., Meier-Ewert, S., Ross, M., Larin, Z., Monaco, A.P., Lehrach, H. (1993). Genome mapping and cloning of mutations using yeast artificial chromosomes. Methods Enzymol. 225, 637–653.

    Google Scholar 

  • Degan, S.J., Bell, S.H., Schaefer, L.A., Elliot, R.W. (1990). Characterization of a cDNA coding for mouse plasminogen and localization to mouse chromosome 17. Genomics 8, 49–61.

    Google Scholar 

  • Ebersole, T., Rho, O., Artzt, K. (1992). The proximal end of mouse chromosome 17: new molecular markers identify a deletion associated with quaking viable. Genetics 131, 183–190.

    Google Scholar 

  • Feinberg, A.P., Vogelstein, B. (1984). A technique for radiolabelling DNA restriction endonuclease fragments to high specific activity. Anal. Biochem. 137, 266–267.

    Google Scholar 

  • Frischauf, A-M. (1990). Map of the t-complex. In Genetic Variants and Strains of the Laboratory Mouse, M.F. Lyon, A.G. Searle, eds. (Oxford: Oxford University Press), pp. 428–431.

    Google Scholar 

  • Green, M.C. (1990). Catalog of mutant genes and polymorphic loci. In Genetic Variants and Strains of the Laboratory Mouse, M.F. Lyon, A.G. Searle, eds. (Oxford: Oxford University Press), pp. 12–403.

    Google Scholar 

  • Hermann, B., Bucan, M., Mains, P.E., Frischauf, A.-M., Silver, L.M., Lehrach, H. (1986). Genetic analysis of the proximal protion of the mouse t complex: evidence for a second inversion within t haplotypes. Cell 44, 469–476.

    Google Scholar 

  • Hermann, B.G., Barlow, D.P., Lehrach, H. (1987). A large inverted duplication allows homologous recombination between chromosomes heterozygous for the proximal t complex. Cell 48, 813–825.

    Google Scholar 

  • Hermanson, G.G., Hoekstra, M.F., McElligott, D.L., Evans, G.A. (1991). Rescue of end fragments of yeast artificial chromosomes by homologous recombination in yeast. Nucleic Acids Res. 19, 4943–4948.

    Google Scholar 

  • Justice, M.C., Bode, V.C. (1988). Three ENU-induced alleles of the murine quaking locus are recessive embryonic lethal mutations. Genet. Res. 51, 95–102.

    Google Scholar 

  • King, T.R., Dove, W.F. (1991). Pleotropic action of the murine quaking locus: structure of theqk v allele. Mammalian Genome 1, 47–52.

    Google Scholar 

  • King, T.R., Dove, W.F., Herrmann, B., Moser, A., Shedlovsky, A. (1989). Mapping to molecular resolution in the T to H-2 region of the mouse genome with a nested set of meiotic recombinants. Proc. Natl. Acad. Sci. USA 86, 222–226.

    Google Scholar 

  • Larin, Z., Monaco, A.P., Lehrach, H. (1991). Yeast artificial chromosome libraries containing large inserts from mouse and human DNA. Proc. Natl. Acad. Sci. USA 88, 4123–4127.

    Google Scholar 

  • Larin, Z., Monaco, A.P., Meier-Ewert, S., Lehrach, H. (1993). Construction and characterisation of large insert mouse YAC libraries. In Methods Enzymol 225, in press.

  • Larsen, F., Gundersen, G., Lopez, R., Prydz, H. (1992). CpG islands as gene markers in the human genome. Genomics 13, 1095–1107.

    Google Scholar 

  • Leder, A., Swan, D., Ruddle, F., D'Eustachio, P., Leder, P. (1981). Dispersion of alpha-like globin genes of the mouse to three different chromosomes. Nature 293, 196–200.

    Google Scholar 

  • Lindsay, S., Bird, A.P. (1987). Use of restriction enzymes to detect potential gene sequences in mammalian DNA. Nature 327, 336–338.

    Google Scholar 

  • Litt, M., White, R.L. (1985). A highly polymorphic locus in human DNA revealed by cosmid-derived probes. Proc. Natl. Acad. Sci. USA 82, 6206–6210.

    Google Scholar 

  • Mann, E.A., Silver, L.M., Elliot, R.W. (1986). Genetic analysis of a mouse T complex locus that is homologous to a kidney cDNA clone. Genetics 114, 993–1006.

    Google Scholar 

  • Petersen, T.E., Martzen, M.R., Ichinose, A., Davie, E. (1990). Characterisation of the gene for human plasminogen a key proenzyme in the fibrinolytic system. J. Biol. Chem. 265, 6104–6111.

    Google Scholar 

  • Riley, J., Butler, R., Finniear, R., Jenner, D., Powell, S., Anand, R., Smith, J.C., Markham, A.F. (1990). A novel, rapid method for the isolation of terminal sequences from yeast artificial chromosome (YAC) clones. Nucleic Acids Res. 18, 2887–2890.

    Google Scholar 

  • Schweifer, N., Barlow, D.P. (1992). The mouse plasminogen locus maps to the recombination breakpoints of the t Lub2and Tt Orlpartial t haplotypes but is not at the t w73locus. Mammalian Genome 2, 260–268.

    Google Scholar 

  • Sealy, P.G., Whittaker, P.A., Southern, E. (1985). Removal of repeated sequences from hybridisation probes. Nucleic Acids Res. 13, 1905–1922.

    Google Scholar 

  • Shedlovsky, A., Guénet, J.-L., Johnson, L.L., Dove, W.F. (1986). Induction of recessive lethal mutations in the T/t-H2 region of the mouse genome by a point mutagen. Genet. Res. 47, 135–142.

    Google Scholar 

  • Shedlovsky, A., King, T.R., Dove, W.F. (1988). Saturation germ line mutagenesis of the murine t region including a lethal allele at the quaking locus. Proc. Natl. Acad. Sci. USA 85, 180–184.

    Google Scholar 

  • Sidman, R.L., Dickie, M.M., Appel, S.H. (1964). Mutant mice (quaking and jimpy) with deficient myelination in their central nervous system. Science 144, 309–311.

    Google Scholar 

  • Silver, L.M. (1985). Mouse t haplotypes. Annu. Rev. Genet. 19, 179–208.

    Google Scholar 

  • Silver, L.M., Artzt, K., Barlow, D., Fischer-Lindahl, K., Lyon, M., Klein, J., Snyder, L. (1992). Mouse Chromosome 17. Mammalian Genome 3(Suppl.):S241-S260.

    Google Scholar 

  • Stöger, R., Kubicka, P., Liu, C.-G., Kafri, T., Razin, A., Cedar, H., Barlow, D.P. (1993). Maternal-specific methylation of the imprinted mouse Igf2r locus identifies the expressed locus as carrying the imprinted signal. Cell 73, 61–71.

    Google Scholar 

  • Washburn, L.L., Eicher, E.M. (1983). Sex reversal in XY mice caused by dominant mutation on chromosome 17. Nature 303, 338–340.

    Google Scholar 

  • Washburn, L.L., Lee, B.K., Eicher, E.M. (1990). Inheritance of T-associated sex reversal in mice. Genet. Res. 56, 185–191.

    Google Scholar 

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Cox, R.D., Whittington, J., Shedlovsky, A. et al. Detailed physical and genetic mapping in the region of plasminogen, D17Rp17e, and quaking. Mammalian Genome 4, 687–694 (1993). https://doi.org/10.1007/BF00357791

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