Zinc fingers in Caenorhabditis elegans: finding families and probing pathways

Science. 1998 Dec 11;282(5396):2018-22. doi: 10.1126/science.282.5396.2018.

Abstract

More than 3 percent of the protein sequences inferred from the Caenorhabditis elegans genome contain sequence motifs characteristic of zinc-binding structural domains, and of these more than half are believed to be sequence-specific DNA-binding proteins. The distribution of these zinc-binding domains among the genomes of various organisms offers insights into the role of zinc-binding proteins in evolution. In addition, the complete genome sequence of C. elegans provides an opportunity to analyze, and perhaps predict, pathways of transcriptional regulation.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.
  • Review

MeSH terms

  • Animals
  • Binding Sites
  • Caenorhabditis elegans / chemistry*
  • Caenorhabditis elegans / genetics
  • Caenorhabditis elegans / metabolism
  • Caenorhabditis elegans Proteins*
  • DNA-Binding Proteins / chemistry
  • DNA-Binding Proteins / genetics
  • DNA-Binding Proteins / metabolism
  • Evolution, Molecular
  • GATA Transcription Factors
  • Gene Expression Regulation
  • Helminth Proteins / chemistry*
  • Helminth Proteins / genetics
  • Helminth Proteins / metabolism
  • Membrane Proteins / chemistry
  • Membrane Proteins / genetics
  • Membrane Proteins / metabolism
  • Receptors, Cell Surface / chemistry
  • Receptors, Cell Surface / genetics
  • Trans-Activators / chemistry
  • Trans-Activators / genetics
  • Trans-Activators / metabolism
  • Transcription Factors / chemistry
  • Transcription Factors / genetics
  • Transcription Factors / metabolism
  • Zinc Fingers*

Substances

  • Caenorhabditis elegans Proteins
  • DNA-Binding Proteins
  • ELT-1 protein, C elegans
  • GATA Transcription Factors
  • Helminth Proteins
  • Membrane Proteins
  • Receptors, Cell Surface
  • Trans-Activators
  • Transcription Factors
  • tra-1 protein, C elegans