The 2023 MDPI Annual Report has
been released!
 
22 pages, 5730 KiB  
Article
Investigating the Anti-Inflammatory Properties and Skin Penetration Ability of Cornelian Cherry (Cornus mas L.) Extracts
by Martyna Zagórska-Dziok, Anna Nowak, Anna Muzykiewicz-Szymańska, Aleksandra Ziemlewska, Zofia Nizioł-Łukaszewska, Agnieszka Mokrzyńska, Magdalena Wójciak and Ireneusz Sowa
Int. J. Mol. Sci. 2024, 25(9), 4763; https://doi.org/10.3390/ijms25094763 (registering DOI) - 27 Apr 2024
Abstract
Plant extracts can be a valuable source of biologically active compounds in many cosmetic preparations. Their effect depends on the phytochemicals they contain and their ability to penetrate the skin. Therefore, in this study, the possibility of skin penetration by phenolic acids contained [...] Read more.
Plant extracts can be a valuable source of biologically active compounds in many cosmetic preparations. Their effect depends on the phytochemicals they contain and their ability to penetrate the skin. Therefore, in this study, the possibility of skin penetration by phenolic acids contained in dogwood extracts of different fruit colors (yellow, red, and dark ruby red) prepared using different extractants was investigated. These analyses were performed using a Franz chamber and HPLC-UV chromatography. Moreover, the antioxidant properties of the tested extracts were compared and their impact on the intracellular level of free radicals in skin cells was assessed. The cytotoxicity of these extracts towards keratinocytes and fibroblasts was also analyzed and their anti-inflammatory properties were assessed using the enzyme-linked immunosorbent assay (ELISA). The analyses showed differences in the penetration of individual phenolic acids into the skin and different biological activities of the tested extracts. None of the extracts had cytotoxic effects on skin cells in vitro, and the strongest antioxidant and anti-inflammatory properties were found in dogwood extracts with dark ruby red fruits. Full article
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14 pages, 3904 KiB  
Article
Investigation into the Anti-Acne Effects of Castanea sativa Mill Leaf and Its Pure Ellagitannin Castalagin in HaCaT Cells Infected with Cutibacterium acnes
by Stefano Piazza, Giulia Martinelli, Nicole Maranta, Carola Pozzoli, Marco Fumagalli, Vincenzo Nicolaci, Elisa Sonzogni, Luca Colombo, Enrico Sangiovanni and Mario Dell’Agli
Int. J. Mol. Sci. 2024, 25(9), 4764; https://doi.org/10.3390/ijms25094764 (registering DOI) - 27 Apr 2024
Abstract
Acne vulgaris is a prevalent skin disorder affecting many young individuals, marked by keratinization, inflammation, seborrhea, and colonization by Cutibacterium acnes (C. acnes). Ellagitannins, known for their antibacterial and anti-inflammatory properties, have not been widely studied for their anti-acne effects. Chestnut [...] Read more.
Acne vulgaris is a prevalent skin disorder affecting many young individuals, marked by keratinization, inflammation, seborrhea, and colonization by Cutibacterium acnes (C. acnes). Ellagitannins, known for their antibacterial and anti-inflammatory properties, have not been widely studied for their anti-acne effects. Chestnut (Castanea sativa Mill., C. sativa), a rich ellagitannin source, including castalagin whose acne-related bioactivity was previously unexplored, was investigated in this study. The research assessed the effect of C. sativa leaf extract and castalagin on human keratinocytes (HaCaT) infected with C. acnes, finding that both inhibited IL-8 and IL-6 release at concentrations below 25 μg/mL. The action mechanism was linked to NF-κB inhibition, without AP-1 involvement. Furthermore, the extract displayed anti-biofilm properties and reduced CK-10 expression, indicating a potential role in mitigating inflammation, bacterial colonization, and keratosis. Castalagin’s bioactivity mirrored the extract’s effects, notably in IL-8 inhibition, NF-κB inhibition, and biofilm formation at low μM levels. Other polyphenols, such as flavonol glycosides identified via LC-MS, might also contribute to the extract’s biological activities. This study is the first to explore ellagitannins’ potential in treating acne, offering insights for developing chestnut-based anti-acne treatments pending future in vivo studies. Full article
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16 pages, 4007 KiB  
Article
Fiber Bragg Gratings Sensor Strain–Optic Behavior with Different Polymeric Coatings Subjected to Transverse Strain
by Manuel González-Gallego, Félix Terroba Ramírez, Juan Luis Martínez-Vicente, Miguel González del Val, Juan José López-Cela and Malte Frövel
Polymers 2024, 16(9), 1223; https://doi.org/10.3390/polym16091223 (registering DOI) - 27 Apr 2024
Abstract
This research work is based on a previous study by the authors that characterized the behavior of FBG sensors with a polyimide coating in a structural monitoring system. Sensors applied to structural health monitoring are affected by the presence of simultaneous multidirectional strains. [...] Read more.
This research work is based on a previous study by the authors that characterized the behavior of FBG sensors with a polyimide coating in a structural monitoring system. Sensors applied to structural health monitoring are affected by the presence of simultaneous multidirectional strains. The previous study observed the influence of the transverse strain (εy) while keeping the longitudinal strain constant (εx), where the x direction is the direction of the optical fiber. The present study develops an experimental methodology consisting of a biaxial test plan on cruciform specimens with three embedded FBG sensors coated with polyimide, acrylate, and ORMOCER®. Applying the Strain–Optic Theory as a reference, a comparison of the experimental values obtained with the different coatings was studied. This experimental work made it possible to study the influence of the transverse strain (εy) on the longitudinal measurements of each FBGS and the influence of the coating material. Finally, the calibration procedure was defined as well as K (strain sensitivity factor) for each sensor. Full article
(This article belongs to the Section Polymer Membranes and Films)
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17 pages, 43621 KiB  
Article
Sector-Level Inter-Provincial Virtual Water Trade in China: Implications for Regional Water Stress
by Bo Zhou, Yu Li and Tariq Ali
Sustainability 2024, 16(9), 3666; https://doi.org/10.3390/su16093666 (registering DOI) - 27 Apr 2024
Abstract
China faces severe water resource shortages due to the uneven distribution of water resources and ever-increasing water demand driven by rapid industrialization and urbanization. The virtual water trade (VWT) is a potential solution to conserve water resources by transferring water from water-abundant/water-productive regions [...] Read more.
China faces severe water resource shortages due to the uneven distribution of water resources and ever-increasing water demand driven by rapid industrialization and urbanization. The virtual water trade (VWT) is a potential solution to conserve water resources by transferring water from water-abundant/water-productive regions to water-scarce/less water-productive regions. Based on the inter-provincial input-output model, the provincial VWT of China was estimated at the sectoral level. The relationship of VWT with water resources in 30 provinces was analyzed in relation to the water stress index (WSI). It was found that (1) total inter-provincial VW trade showed a downward trend during the study period, with 363.91 km3 in 2002, 283.72 km3 in 2007, and 285.23 km3 in 2012. Overall, the primary industry dominated the VWT for most provinces. (2) China’s virtual water flowed from the relatively underdeveloped central and western regions to the east with a relatively developed economy from the inter-provincial level. This trend became increasingly prominent. (3) In many instances, VW was transferred from water-poor to water-rich areas. These results imply that China needs to improve its water use efficiency and optimize its regional industrial structure. Additionally, establishing an ecological compensation mechanism is considered a valuable measure for China to alleviate regional water resource pressure. Full article
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11 pages, 651 KiB  
Article
The Effect of a Cognitive Dual Task on Gait Parameters among Healthy Young Adults with Good and Poor Sleep Quality: A Cross-Sectional Analysis
by Jood Dalbah, Shima A. Mohammad Zadeh and Meeyoung Kim
J. Clin. Med. 2024, 13(9), 2566; https://doi.org/10.3390/jcm13092566 (registering DOI) - 27 Apr 2024
Abstract
Background: Sleep quality is known to affect automatic and executive brain functions such as gait control and cognitive processing. This study aimed to investigate the effect of dual tasks on gait spatiotemporal parameters among young adults with good and poor sleep quality. [...] Read more.
Background: Sleep quality is known to affect automatic and executive brain functions such as gait control and cognitive processing. This study aimed to investigate the effect of dual tasks on gait spatiotemporal parameters among young adults with good and poor sleep quality. Methods: In total, 65 young adults with a mean age of 21.1 ± 2.5 were assessed for gait analysis during single-task and dual-task conditions. The participants’ sleep quality was assessed using the Pittsburgh Sleep Quality Index (PSQI) and gait was assessed using the BTS Gaitlab System. The participants were asked to walk at natural speed as a single-task condition, followed by walking while performing a cognitive task as a dual-task condition. The parameters assessed included the gait velocity (m/s), cadence (steps/min), step width (m), and stride length (m). The dual-task cost (DTC) on each gait parameter was calculated. The Mann–Whitney U test was used to compare the differences in the DTC on gait variables between the good and poor sleep quality groups and the Spearman correlation test was used to assess the correlation between total PSQI scores and the DTC. Results: At a significance level of p < 0.05, a significant difference in cadence between the two sleep quality groups was observed, in addition to a positive correlation between sleep quality and the DTC effect on gait mean velocity, cadence, and stride length. Our findings also revealed a greater DTC in participants with poorer sleep quality. Conclusions: These findings contribute to our perception of the significance of sleep quality in gait performance while multitasking in younger populations. Full article
(This article belongs to the Special Issue New Insights into Sleep Medicine)
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19 pages, 312 KiB  
Article
Is Science Able to Perform under Pressure?
by Ho Fai Chan, Nikita Ferguson, David Stadelmann and Benno Torgler
Knowledge 2024, 4(2), 233-251; https://doi.org/10.3390/knowledge4020012 (registering DOI) - 27 Apr 2024
Abstract
Science has been an incredibly powerful and revolutionary force. However, it is not clear whether science is suited to performance under pressure; generally, science achieves best in its usual comfort zone of patience, caution, and slowness. But, if science is organized knowledge and [...] Read more.
Science has been an incredibly powerful and revolutionary force. However, it is not clear whether science is suited to performance under pressure; generally, science achieves best in its usual comfort zone of patience, caution, and slowness. But, if science is organized knowledge and acts as a guiding force for making informed decisions, it is important to understand how science and scientists perform as a reliable and valuable institution in a global crisis. This paper provides insights and reflections based on the experience of the COVID-19 pandemic and from an analytical perspective. In particular, we analyze aspects such as speed, transparency, trust, data sharing, scientists in the political arena, and the psychology of scientists—all of which are areas inviting more detailed investigations by future studies conducting systematic empirical studies. Full article
16 pages, 1985 KiB  
Essay
Is Life Binary or Gradual?
by Christophe Malaterre
Life 2024, 14(5), 564; https://doi.org/10.3390/life14050564 (registering DOI) - 27 Apr 2024
Abstract
The binary nature of life is deeply ingrained in daily experiences, evident in the stark distinctions between life and death and the living and the inert. While this binary perspective aligns with disciplines like medicine and much of biology, uncertainties emerge in fields [...] Read more.
The binary nature of life is deeply ingrained in daily experiences, evident in the stark distinctions between life and death and the living and the inert. While this binary perspective aligns with disciplines like medicine and much of biology, uncertainties emerge in fields such as microbiology, virology, synthetic biology, and systems chemistry, where intermediate entities challenge straightforward classification as living or non-living. This contribution explores the motivations behind both binary and non-binary conceptualizations of life. Despite the perceived necessity to unequivocally define life, especially in the context of origin of life research and astrobiology, mounting evidence indicates a gray area between what is intuitively clearly alive and what is distinctly not alive. This prompts consideration of a gradualist perspective, depicting life as a spectrum with varying degrees of “lifeness”. Given the current state of science, the existence or not of a definite threshold remains open. Nevertheless, shifts in epistemic granularity and epistemic perspective influence the framing of the question, and scientific advancements narrow down possible answers: if a threshold exists, it can only be at a finer level than what is intuitively taken as living or non-living. This underscores the need for a more refined distinction between the inanimate and the living. Full article
(This article belongs to the Special Issue What Is Life?)
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17 pages, 2698 KiB  
Article
A Ship Trajectory Prediction Method Based on an Optuna–BILSTM Model
by Yipeng Zhou, Ze Dong and Xiongguan Bao
Appl. Sci. 2024, 14(9), 3719; https://doi.org/10.3390/app14093719 (registering DOI) - 27 Apr 2024
Abstract
In the field of maritime traffic management, overcoming the challenges of low prediction accuracy and computational inefficiency in ship trajectory prediction is crucial for collision avoidance. This paper presents an advanced solution using a deep bidirectional long- and short-term memory network (BILSTM) and [...] Read more.
In the field of maritime traffic management, overcoming the challenges of low prediction accuracy and computational inefficiency in ship trajectory prediction is crucial for collision avoidance. This paper presents an advanced solution using a deep bidirectional long- and short-term memory network (BILSTM) and the Optuna hyperparameter automatic optimized framework. Utilizing automatic identification system (AIS) data to analyze ship navigation patterns, the study applies Optuna to fine-tune the hyperparameters of the BILSTM network to improve prediction accuracy and efficiency. The developed Optuna–BILSTM model shows a remarkable 7% increase in prediction accuracy over traditional back propagation (BP) neural networks and standard BILSTM models. These results not only improve ship navigation and safety but also have significant implications for the development of autonomous ship collision avoidance systems, marking a significant step toward safer and more efficient maritime traffic management. Full article
(This article belongs to the Section Marine Science and Engineering)
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14 pages, 5372 KiB  
Article
Mechanism of Ligilactobacillus salivarius GX118 in Regulating the Growth of Rainbow Trout (Oncorhynchus mykiss) and Resistance to Aeromonas salmonicida Infection
by Xiyu Cao, Bowen Wang, Wenhao Ren, Jiang Wang, Qi Liu, Yichao Ren and Xianliang Meng
Fishes 2024, 9(5), 157; https://doi.org/10.3390/fishes9050157 (registering DOI) - 27 Apr 2024
Abstract
Lactic acid bacteria Ligilactobacillus salivarius has been shown to be a substitute for antibiotics in the treatment of bacterial disease in high animals. However, its beneficial mechanism in fish farming is still unclear. This study evaluated the antagonistic effects of the Ligilactobacillus salivarius [...] Read more.
Lactic acid bacteria Ligilactobacillus salivarius has been shown to be a substitute for antibiotics in the treatment of bacterial disease in high animals. However, its beneficial mechanism in fish farming is still unclear. This study evaluated the antagonistic effects of the Ligilactobacillus salivarius GX118 strain on Aeromonas salmonicida and its regulation of rainbow trout growth in vivo and in vitro. The results found that GX118 produces an antibacterial substance that can directly destroy the cell wall of A. salmonicida. Whole-genome sequencing of GX118 revealed that Enterolysin A is a type III bacteriocin with antibacterial properties. An in vivo experiment showed that the supplementation of GX118 in diet competitively inhibited the colonization of A. salmonicida in the intestine. In addition, it was able to improve the growth performance of rainbow trout within a 21-day feeding experiment. The supplementation of GX118 increased the diversity of gut microbiota, in which the abundance of Bacteroidota, Blautia, and Rhodobacteraceae increased. In addition, the use of GX118 activated the expression of IFN-γ and NF-κB genes and reduced the expression level of IL-6 and IL-8, thus exhibiting a certain effect on activating the immunity of rainbow trout. This study provides a scientific basis for the development of antibacterial probiotics in the healthy farming of rainbow trout. Full article
(This article belongs to the Special Issue Fish Diseases Diagnostics and Prevention in Aquaculture)
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10 pages, 1179 KiB  
Article
Identifying the Trends of Urinary microRNAs within Extracellular Vesicles for Esophageal Cancer
by Kazuhiko Hisaoka, Satoru Matsuda, Kodai Minoura, Hiroki Yamaguchi, Yuki Ichikawa, Mika Mizunuma, Ryota Kobayashi, Yosuke Morimoto, Masashi Takeuchi, Kazumasa Fukuda, Rieko Nakamura, Shutaro Hori, Taigi Yamazaki, Takehiko Sambe, Hirofumi Kawakubo and Yuko Kitagawa
Cancers 2024, 16(9), 1698; https://doi.org/10.3390/cancers16091698 (registering DOI) - 27 Apr 2024
Abstract
Background: The advancement of multidisciplinary treatment has increased the need to develop tests to monitor tumor burden during treatment. We herein analyzed urinary microRNAs within extracellular vesicles from patients with esophageal squamous cell carcinoma (ESCC) and normal individuals using a microarray. Methods: [...] Read more.
Background: The advancement of multidisciplinary treatment has increased the need to develop tests to monitor tumor burden during treatment. We herein analyzed urinary microRNAs within extracellular vesicles from patients with esophageal squamous cell carcinoma (ESCC) and normal individuals using a microarray. Methods: Patients with advanced ESCC who underwent esophagectomy (A), endoscopic submucosal resection (ESD) (B), and healthy donors (C) were included. Based on microRNA expression among the groups (Analysis 1), microRNAs with significant differences between groups A and C were selected (Analysis 2). Of these candidates, microRNAs in which the change between A and C was consistent with the change between B and C were selected for downstream analysis (Analysis 3). Finally, microRNA expression was validated in patients with recurrence from A (exploratory analysis). Results: For analysis 1, 205 microRNAs were selected. For Analyses 2 and 3, the changes in 18 microRNAs were consistent with changes in tumor burden as determined by clinical imaging and pathological findings. The AUC for the detection of ESCC using 18 microRNAs was 0.72. In exploratory analysis, three of eighteen microRNAs exhibited a concordant trend with recurrence. Conclusions: The current study identified the urinary microRNAs which were significantly expressed in ESCC patients. Validation study is warranted to evaluate whether these microRNAs could reflect tumor burden during multidisciplinary treatment for ESCC. Full article
(This article belongs to the Special Issue Preoperative Chemoradiotherapy for Gastrointestinal Cancer)
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8 pages, 1636 KiB  
Communication
Synthesis and Oxidative Degradation of Leucine-Based Poly(diacylhydrazine)
by Kanda Wongwailikhit, Ratha Suwannakeeree and Nobuhiro Kihara
Polymers 2024, 16(9), 1222; https://doi.org/10.3390/polym16091222 (registering DOI) - 27 Apr 2024
Abstract
Diacylhydrazine is thermally and chemically stable, and it remains inert to oxygen even at high temperatures. However, it is rapidly oxidized by sodium hypochlorite, leading to its decomposition into carboxylic acid and nitrogen gas. In the synthesis of a novel poly(diacylhydrazine) as an [...] Read more.
Diacylhydrazine is thermally and chemically stable, and it remains inert to oxygen even at high temperatures. However, it is rapidly oxidized by sodium hypochlorite, leading to its decomposition into carboxylic acid and nitrogen gas. In the synthesis of a novel poly(diacylhydrazine) as an oxidatively degradable polymer, L-leucine methyl ester is acylated by terephthaloyl chloride. Subsequent hydrazination yields a bishydrazide monomer. The oxidative coupling polymerization of this monomer produces poly(diacylhydrazine). The molecular structures of the products are confirmed by an 1H NMR analysis. A polymodal molecular weight distribution and a large polydispersity index are observed by GPC in all cases. A 10% weight loss temperature is noted at 286 °C in air by TGA. The obtained polymer is not oxidized by oxygen. No glass transition is observed below the decomposition temperature. Upon the treatment of the poly(diacylhydrazine) with sodium hypochlorite solution, decomposition occurs rapidly, resulting in monomeric carboxylic acid and nitrogen gas. The L-leucine-based poly(diacylhydrazine) serves as a novel on-demand degradable polymer with high levels of thermal and chemical stability during usage. Full article
(This article belongs to the Collection Design and Synthesis of Polymers)
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11 pages, 9112 KiB  
Communication
Global Precipitation for the Year 2023 and How It Relates to Longer Term Variations and Trends
by Robert F. Adler and Guojun Gu
Atmosphere 2024, 15(5), 535; https://doi.org/10.3390/atmos15050535 (registering DOI) - 27 Apr 2024
Abstract
In this paper, the global distribution of precipitation for 2023, in terms of global totals and regional anomaly patterns, is analyzed using information from the new Global Precipitation Climatology Project (GPCP) V3.2 Monthly product, including how the precipitation amounts and patterns from 2023 [...] Read more.
In this paper, the global distribution of precipitation for 2023, in terms of global totals and regional anomaly patterns, is analyzed using information from the new Global Precipitation Climatology Project (GPCP) V3.2 Monthly product, including how the precipitation amounts and patterns from 2023 fit into the longer record from 1983–2023. The tropical pattern of anomalies for 2023 is dominated by the effect of the El Nino which began during the Northern Hemisphere spring, after three plus years of La Nina conditions. The transition from La Nina conditions through 2022 shows the rapid change in many regional features from positive to negative anomalies or the reverse. Comparison of the observed regional trend maps with climate model results indicates similarity between the observations and the model results forced by observed SSTs, while the “free-running” model ensemble shows only a broad general agreement over large regions. Global total precipitation shows about a 3% range over the span of data, with El Nino and La Nina years prominent as positive and negative features, with 2023 showing a small positive global anomaly. The ITCZ (Inter-Tropical Convergence Zone) latitude band, 0–10° N, sets a record high mean rain rate in 2023 after a steady upward trend over the decades, probably a response related to global warming. Full article
(This article belongs to the Special Issue The Water Cycle and Climate Change (2nd Edition))
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22 pages, 2049 KiB  
Review
Updates in Cancer Cachexia: Clinical Management and Pharmacologic Interventions
by Sudeep Pandey, Lauren Bradley and Egidio Del Fabbro
Cancers 2024, 16(9), 1696; https://doi.org/10.3390/cancers16091696 (registering DOI) - 27 Apr 2024
Abstract
Despite a better understanding of the mechanisms causing cancer cachexia (CC) and development of promising pharmacologic and supportive care interventions, CC persists as an underdiagnosed and undertreated condition. CC contributes to fatigue, poor quality of life, functional impairment, increases treatment related toxicity, and [...] Read more.
Despite a better understanding of the mechanisms causing cancer cachexia (CC) and development of promising pharmacologic and supportive care interventions, CC persists as an underdiagnosed and undertreated condition. CC contributes to fatigue, poor quality of life, functional impairment, increases treatment related toxicity, and reduces survival. The core elements of CC such as weight loss and poor appetite should be identified early. Currently, addressing contributing conditions (hypothyroidism, hypogonadism, and adrenal insufficiency), managing nutrition impact symptoms leading to decreased oral intake (nausea, constipation, dysgeusia, stomatitis, mucositis, pain, fatigue, depressed mood, or anxiety), and the addition of pharmacologic agents when appropriate (progesterone analog, corticosteroids, and olanzapine) is recommended. In Japan, the clinical practice has changed based on the availability of Anamorelin, a ghrelin receptor agonist that improved lean body mass, weight, and appetite-related quality of life (QoL) compared to a placebo, in phase III trials. Other promising therapeutic agents currently in trials include Espindolol, a non-selective β blocker and a monoclonal antibody to GDF-15. In the future, a single therapeutic agent or perhaps multiple medications targeting the various mechanisms of CC may prove to be an effective strategy. Ideally, these medications should be incorporated into a multimodal interdisciplinary approach that includes exercise and nutrition. Full article
(This article belongs to the Special Issue Advances in Supportive and Palliative Care in Cancer)
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11 pages, 807 KiB  
Article
Relationship of Hematological Profiles with the Serum Complement System in Patients with Systemic Lupus Erythematosus
by Yolanda Fernández-Cladera, María García-González, Marta Hernández-Díaz, Fuensanta Gómez-Bernal, Juan C. Quevedo-Abeledo, Agustín F. González-Rivero, Antonia de Vera-González, Cristina Gómez-Moreno, Miguel Á. González-Gay and Iván Ferraz-Amaro
Biomedicines 2024, 12(5), 967; https://doi.org/10.3390/biomedicines12050967 (registering DOI) - 27 Apr 2024
Abstract
Systemic lupus erythematosus (SLE) is a chronic autoimmune disorder identified by hematological abnormalities including anemia, leukopenia, and thrombocytopenia. Complement system disturbance is implicated in the pathogenesis of SLE. In this work, we aim to study how a full assessment of the complement system, [...] Read more.
Systemic lupus erythematosus (SLE) is a chronic autoimmune disorder identified by hematological abnormalities including anemia, leukopenia, and thrombocytopenia. Complement system disturbance is implicated in the pathogenesis of SLE. In this work, we aim to study how a full assessment of the complement system, which includes the evaluation of its three pathways, relates to blood cell counts in a population of patients with SLE. New-generation functional assays of the classical, alternative, and lectin pathways of the complement system were conducted in 284 patients with SLE. Additionally, serum levels of inactive molecules (C1q, C2, C3, C4, factor D) and activated molecules (C3a), as well as regulators (C1-inhibitor and factor H), were evaluated. Complete blood cell counts were analyzed. Multivariable linear regression analysis was performed to study the relationship of hematological profiles with this full characterization of the complement system. After multivariable adjustments that included age, sex, SLICC-DI (damage), and SLEDAI (activity) scores, as well as the use of aspirin, prednisone, methotrexate, azathioprine, and mycophenolate mofetil, several relationships were observed between the C pathways and the individual products and blood cells profile. Lower values of C1q and C2 were associated with lower hemoglobin levels. Lower leukocyte counts showed significantly lower values of C4, C1 inhibitor, C3, factor D, and alternative pathway functional levels. Neutrophil counts showed significant negative relationships only with the alternative pathway and C1-inh. In the case of lymphocytes, associations were found, especially with functional tests of the classical and alternative pathways, as well as with C2, C4, C3, and C3a. On the contrary, for platelets, significance was only observed, after multivariable adjustment, with lower C2 concentrations. In conclusion, the serum complement system and hematological profile in SLE are independently linked, after adjustment for disease activity and damage. These relationships are basically negative and are predominantly found in lymphocytes. Full article
(This article belongs to the Special Issue Musculoskeletal Diseases: From Molecular Basis to Therapy (Volume II))
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13 pages, 618 KiB  
Review
A Review of the Paradigmatic Role of Adipose Tissue in Renal Cancer: Fat Measurement and Tumor Behavior Features
by Eliodoro Faiella, Elva Vergantino, Federica Vaccarino, Amalia Bruno, Gloria Perillo, Rosario Francesco Grasso, Bruno Beomonte Zobel and Domiziana Santucci
Cancers 2024, 16(9), 1697; https://doi.org/10.3390/cancers16091697 (registering DOI) - 27 Apr 2024
Abstract
(1) Background: Renal-cell carcinoma (RCC) incidence has been steadily rising, with obesity identified as a potential risk factor. However, the relationship between obesity and RCC prognosis remains unclear. This systematic review aims to investigate the impact of different adipose tissue measurements on RCC [...] Read more.
(1) Background: Renal-cell carcinoma (RCC) incidence has been steadily rising, with obesity identified as a potential risk factor. However, the relationship between obesity and RCC prognosis remains unclear. This systematic review aims to investigate the impact of different adipose tissue measurements on RCC behavior and prognosis. (2) Methods: A search of MEDLINE databases identified 20 eligible studies focusing on various fat measurements, including visceral adipose tissue (VAT), subcutaneous adipose tissue (SAT), perirenal adipose tissue (PRAT), and the Mayo adhesive probability (MAP) score. (3) Results: The review revealed conflicting findings regarding the association between adipose tissue measurements and RCC outcomes. While some studies suggested a protective role of certain fat deposits, particularly VAT, against disease progression and mortality, others reported contradictory results across different adipose metrics and RCC subtypes. (4) Conclusions: Methodological variations and limitations, such as retrospective designs and sample size constraints, pose challenges to standardization and generalizability. Further research is needed to understand these associations better and establish standardized approaches for adiposity assessment in RCC patients, which could inform clinical practice and therapeutic decision-making. Full article
(This article belongs to the Special Issue Cell Biology of Cancer Invasion)
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12 pages, 975 KiB  
Article
CYP7B1 as a Biomarker for Prostate Cancer Risk and Progression: Metabolic and Oncogenic Signatures (Diagnostic Immunohistochemistry Analysis by Tissue Microarray in Prostate Cancer Patients—Diamond Study)
by Giorgio Ivan Russo, Emil Durukan, Maria Giovanna Asmundo, Arturo Lo Giudice, Serena Salzano, Sebastiano Cimino, Antonio Rescifina, Mikkel Fode, Ali Saber Abdelhameed, Rosario Caltabiano and Giuseppe Broggi
Int. J. Mol. Sci. 2024, 25(9), 4762; https://doi.org/10.3390/ijms25094762 (registering DOI) - 27 Apr 2024
Abstract
We aimed to analyze the association between CYP7B1 and prostate cancer, along with its association with proteins involved in cancer and metabolic processes. A retrospective analysis was performed on 390 patients with prostate cancer (PC) or benign prostatic hyperplasia (BPH). We investigated the [...] Read more.
We aimed to analyze the association between CYP7B1 and prostate cancer, along with its association with proteins involved in cancer and metabolic processes. A retrospective analysis was performed on 390 patients with prostate cancer (PC) or benign prostatic hyperplasia (BPH). We investigated the interactions between CYP7B1 expression and proteins associated with PC and metabolic processes, followed by an analysis of the risk of biochemical recurrence based on CYP7B1 expression. Of the 139 patients with elevated CYP7B1 expression, 92.8% had prostate cancer. Overall, no increased risk of biochemical recurrence was associated with CYP7B1 expression. However, in a non-diabetic subgroup analysis, higher CYP7B1 expression indicated a higher risk of biochemical recurrence, with an HR of 1.78 (CI: 1.0–3.2, p = 0.05). PC is associated with elevated CYP7B1 expression. In a subgroup analysis of non-diabetic patients, elevated CYP7B1 expression was associated with an increased risk of biochemical recurrence, suggesting increased cancer aggressiveness. Full article
(This article belongs to the Section Molecular Informatics)
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18 pages, 3282 KiB  
Article
Deep-Representation-Learning-Based Classification Strategy for Anticancer Peptides
by Shujaat Khan
Mathematics 2024, 12(9), 1330; https://doi.org/10.3390/math12091330 (registering DOI) - 27 Apr 2024
Abstract
Cancer, with its complexity and numerous origins, continues to provide a huge challenge in medical research. Anticancer peptides are a potential treatment option, but identifying and synthesizing them on a large scale requires accurate prediction algorithms. This study presents an intuitive classification strategy, [...] Read more.
Cancer, with its complexity and numerous origins, continues to provide a huge challenge in medical research. Anticancer peptides are a potential treatment option, but identifying and synthesizing them on a large scale requires accurate prediction algorithms. This study presents an intuitive classification strategy, named ACP-LSE, based on representation learning, specifically, a deep latent-space encoding scheme. ACP-LSE can demonstrate notable advancements in classification outcomes, particularly in scenarios with limited sample sizes and abundant features. ACP-LSE differs from typical black-box approaches by focusing on representation learning. Utilizing an auto-encoder-inspired network, it embeds high-dimensional features, such as the composition of g-spaced amino acid pairs, into a compressed latent space. In contrast to conventional auto-encoders, ACP-LSE ensures that the learned feature set is both small and effective for classification, giving a transparent alternative. The suggested approach is tested on benchmark datasets and demonstrates higher performance compared to the current methods. The results indicate improved Matthew’s correlation coefficient and balanced accuracy, offering insights into crucial aspects for developing new ACPs. The implementation of the proposed ACP-LSE approach is accessible online, providing a valuable and reproducible resource for researchers in the field. Full article
(This article belongs to the Special Issue Artificial Intelligence for Biomedical Applications)
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12 pages, 323 KiB  
Article
Factors Influencing Wound Healing in Diabetic Foot Patients
by Sang Heon Lee, Sung Hwan Kim, Kyung Bum Kim, Ho Sung Kim and Young Koo Lee
Medicina 2024, 60(5), 723; https://doi.org/10.3390/medicina60050723 (registering DOI) - 27 Apr 2024
Abstract
Background and objectives: Diabetic foot stands out as one of the most consequential and devastating complications of diabetes. Many factors, including VIPS (Vascular management, Infection management, Pressure relief, and Source of healing), influence the prognosis and treatment of diabetic foot patients. There [...] Read more.
Background and objectives: Diabetic foot stands out as one of the most consequential and devastating complications of diabetes. Many factors, including VIPS (Vascular management, Infection management, Pressure relief, and Source of healing), influence the prognosis and treatment of diabetic foot patients. There are many studies on VIPS, but relatively few studies on “sources of healing”. Nutrients that affect wound healing are known, but objective data in diabetic foot patients are insufficient. We hypothesized that “sources of healing” would have many effects on wound healing. The purpose of this study is to know the affecting factors related to the source of healing for diabetic foot patients. Materials and Methods: A retrospective review identified 46 consecutive patients who were admitted for diabetic foot management from July 2019 to April 2021 at our department. Several laboratory tests were performed for influencing factor evaluation. We checked serum levels of total protein, albumin, vitamin B, iron, zinc, magnesium, copper, Hb, HbA1c, HDL cholesterol, and LDL cholesterol. These values of diabetic foot patients were compared with normal values. Patients were divided into two groups based on wound healing rate, age, length of hospital stay, and sex, and the test values between the groups were compared. Results: Levels of albumin (37%) and Hb (89%) were low in the diabetic foot patients. As for trace elements, levels of iron (97%) and zinc (95%) were low in the patients, but levels of magnesium and copper were usually normal or high. There were no differences in demographic characteristics based on wound healing rate. However, when compared to normal adult values, diabetic foot patients in our data exhibited significantly lower levels of hemoglobin, total protein, albumin, iron, zinc, copper, and HDL cholesterol. When compared based on age and length of hospital stay, hemoglobin levels were significantly lower in both the older age group and the group with longer hospital stays. Conclusions: Serum levels of albumin, Hb, iron, and zinc were very low in most diabetic foot patients. These low values may have a negative relationship with wound healing. Nutrient replacements are necessary for wound healing in diabetic foot patients. Full article
30 pages, 4965 KiB  
Article
Unraveling the Impact of Extracellular Vesicle-Depleted Serum on Endothelial Cell Characteristics over Time
by Luiz Fernando Cardoso Garcia, Pryscilla Fanini Wowk and Letusa Albrecht
Int. J. Mol. Sci. 2024, 25(9), 4761; https://doi.org/10.3390/ijms25094761 (registering DOI) - 27 Apr 2024
Abstract
Extracellular vesicles (EVs) are produced by all kinds of cells, including endothelial cells. It has been observed that EVs present in fetal bovine serum (FBS), broadly used in cell culture, can be a confounding factor and lead to misinterpretation of results. To investigate [...] Read more.
Extracellular vesicles (EVs) are produced by all kinds of cells, including endothelial cells. It has been observed that EVs present in fetal bovine serum (FBS), broadly used in cell culture, can be a confounding factor and lead to misinterpretation of results. To investigate this phenomenon, human brain microvascular endothelial cells (HBMECs) were cultured for 2 or 24 h in the presence of EV-depleted FBS (EVdS). Cell death, gene and protein expression, and the presence of EVs isolated from these cells were evaluated. The uptake of EVs, intercellular adhesion molecule 1 (ICAM-1) expression, and monocyte adhesion to endothelial cells exposed to EVs were also evaluated. Our results revealed higher apoptosis rates in cells cultured with EVdS for 2 and 24 h. There was an increase in interleukin 8 (IL8) expression after 2 h and a decrease in interleukin 6 (IL6) and IL8 expression after 24 h of culture. Among the proteins identified in EVs isolated from cells cultured for 2 h (EV2h), several were related to ribosomes and carbon metabolism. EVs from cells cultured for 24 h (EV24h) presented a protein profile associated with cell adhesion and platelet activation. Additionally, HBMECs exhibited increased uptake of EV2h. Treatment of endothelial cells with EV2h resulted in greater ICAM-1 expression and greater adherence to monocytes than did treatment with EV24h. According to our data, HBMEC cultivated with EVdS produce EVs with different physical characteristics and protein levels that vary over time. Full article
(This article belongs to the Special Issue Role of Extracellular Vesicles in Immunology)
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16 pages, 5155 KiB  
Article
Microbe-Derived Antioxidants Protect IPEC-1 Cells from H2O2-Induced Oxidative Stress, Inflammation and Tight Junction Protein Disruption via Activating the Nrf2 Pathway to Inhibit the ROS/NLRP3/IL-1β Signaling Pathway
by Cheng Shen, Zhen Luo, Sheng Ma, Chengbing Yu, Ting Lai, Shangshang Tang, Hongcai Zhang, Jing Zhang, Weina Xu and Jianxiong Xu
Antioxidants 2024, 13(5), 533; https://doi.org/10.3390/antiox13050533 (registering DOI) - 27 Apr 2024
Abstract
Oxidative stress can induce inflammation and tight junction disruption in enterocytes. The initiation of inflammation is thought to commence with the activation of the ROS/NLRP3/IL-1β signaling pathway, marking a crucial starting point in the process. In our previous studies, we found that microbe-derived [...] Read more.
Oxidative stress can induce inflammation and tight junction disruption in enterocytes. The initiation of inflammation is thought to commence with the activation of the ROS/NLRP3/IL-1β signaling pathway, marking a crucial starting point in the process. In our previous studies, we found that microbe-derived antioxidants (MAs) showed significant potential in enhancing both antioxidant capabilities and anti-inflammatory effects. The main aim of this research was to investigate the ability of MAs to protect cells from oxidative stress caused by H2O2, to reduce inflammatory responses, and to maintain the integrity of tight junction proteins by modulating the ROS/NLRP3/IL-1β signaling pathway. IPEC-1 cells (1 × 104 cells/well) were initially exposed to 100 mg/L of MAs for 12 h, after which they were subjected to 1 mM H2O2 treatment for 1 h. We utilized small interfering RNA (siRNA) to inhibit the expression of NLRP3 and Nrf2. Inflammatory factors such as IL-1β and antioxidant enzyme activity levels were detected by ELISA. Oxidative stress marker ROS was examined by fluorescence analysis. The NLRP3/IL-1β signaling pathway, Nrf2/HO-1 signaling pathway and tight junction proteins (ZO-1 and Occludin) were detected by RT-qPCR or Western blotting. In our research, it was observed that MA treatment effectively suppressed the notable increase in H2O2-induced inflammatory markers (TNF-α, IL-1β, and IL-18), decreased ROS accumulation, mitigated the expression of NLRP3, ASC, and caspase-1, and promoted the expression of ZO-1 and Occludin. After silencing the NLRP3 gene with siRNA, the protective influence of MAs was observed to be linked with the NLRP3 inflammasome. Additional investigations demonstrated that the treatment with MAs triggered the activation of Nrf2, facilitating its translocation into the nucleus. This process resulted in a notable upregulation of Nrf2, NQO1, and HO-1 expression, along with the initiation of the Nrf2-HO-1 signaling pathway. Consequently, there was an enhancement in the activities of antioxidant enzymes like SOD, GSH-Px, and CAT, which effectively mitigated the accumulation of ROS, thereby ameliorating the oxidative stress state. The antioxidant effectiveness of MAs was additionally heightened in the presence of SFN, an activator of Nrf2. The antioxidant and anti-inflammatory functions of MAs and their role in regulating intestinal epithelial tight junction protein disruption were significantly affected after siRNA knockdown of the Nrf2 gene. These findings suggest that MAs have the potential to reduce H2O2-triggered oxidative stress, inflammation, and disruption of intestinal epithelial tight junction proteins in IPEC-1 cells. This reduction is achieved by blocking the ROS/NLRP3/IL-1β signaling pathway through the activation of the Nrf2 pathway. Full article
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17 pages, 3268 KiB  
Article
Species Composition and Distribution of Terrestrial Herbs in a High Montane Forest in Ecuador
by Catalina Quintana, Henrik Balslev and Renato Valencia
Diversity 2024, 16(5), 262; https://doi.org/10.3390/d16050262 (registering DOI) - 27 Apr 2024
Abstract
In mountain tropical forests, understory herbs have received little attention compared to trees, and their commonness and rarity are virtually unknown. We studied ground herbs to explore how they are assembled in a full one-hectare plot and to test the influence of light [...] Read more.
In mountain tropical forests, understory herbs have received little attention compared to trees, and their commonness and rarity are virtually unknown. We studied ground herbs to explore how they are assembled in a full one-hectare plot and to test the influence of light intensity (LI) and topographic habitats in species composition. The plot is a humid montane forest located in the Pasochoa Volcano, at 3300 m. We found 43 genera and 50 perennial species (30 angiosperms in 17 families, and 20 ferns). Interestingly, herbs are 64% richer in species than trees in the same study plot (50 vs. 32). Herbs were mostly obligately terrestrial (70% of the species), while 30% were fallen climbers and epiphytes rooted in the ground. Across the forest, there were 31,119 individuals that covered 8.5% of the ground. We concluded that both LI and topography shaped the species distribution, the floristic composition, and the community structure of ground herbs. For instance, 12% of the species were exclusively found in places with high LI; the rest of species grew in medium- to low-LI environments. Concerning rarity, we found that 39% of the species are rare (judging by botanical collections; <100), which stresses the need of conservation strategies for this group of plants. Full article
(This article belongs to the Special Issue Diversity Hotspots)
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17 pages, 3835 KiB  
Article
Unveiling Lovastatin’s Anti-Inflammatory Potential in Mouse’s Brain during Acute Trypanosoma cruzi Infection
by Beatriz Matheus de Souza Gonzaga, Líndice Mitie Nisimura, Laura Lacerda Coelho, Roberto Rodrigues Ferreira, Samuel Iwao Maia Horita, Daniela Gois Beghini, Vanessa Estato, Tania Cremonini de Araújo-Jorge and Luciana Ribeiro Garzoni
Biology 2024, 13(5), 301; https://doi.org/10.3390/biology13050301 (registering DOI) - 27 Apr 2024
Abstract
Neurological commitment is a neglected manifestation of Chagas disease (CD). Meningoencephalitis mainly affects children and immunosuppressed patients, while stroke can occur with or without cardiac compromise. One of the possible causes of stroke development is microvascular commitment. Our group previously described that experimental [...] Read more.
Neurological commitment is a neglected manifestation of Chagas disease (CD). Meningoencephalitis mainly affects children and immunosuppressed patients, while stroke can occur with or without cardiac compromise. One of the possible causes of stroke development is microvascular commitment. Our group previously described that experimental Trypanossoma cruzi acute infection leads to cerebral microvasculopathy. This condition is characterized by decreased capillary density, increased leukocyte rolling and adhesion, and endothelial dysfunction. CD was discovered 114 years ago, and until today, only two drugs have been available for clinical treatment: benznidazole and nifurtimox. Both present a high cure rate for the acute phase (80%) and small cure rate for the chronic phase (20%). In addition, the high occurrence of side-effects, without proper medical follow-up, can result in treatment abandonment. Therefore, the search for new therapeutic schemes is necessary. Statins are drugs already used in the clinic that have several pleiotropic effects including endothelial function improvement, anti-inflammatory action, as well as trypanocidal effects, making them a potential alternative treatment for brain microvasculopathy in CD. Here, we investigate the effect of lovastatin (LOV) on brain microvasculopathy and inflammatory parameters. Swiss Webster mice were intraperitoneally inoculated with the Y strain of T. cruzi. Treatment with lovastatin (20 mg/kg/day) was initiated 24 h after the infection and continued for 14 consecutive days. We observed that LOV treatment did not affect parasitemia, brain microcirculation alterations, or the reduction in cerebral blood flow caused by T. cruzi infection. Also, LOV did not prevent the increased number of CD3+ cells and eNOS levels in the T. cruzi-infected brain. No alterations were observed on VCAM-1 and MCP-1 expressions, neither caused by infection nor LOV treatment. However, LOV prevented the increase in F4/80+ cells and ICAM-1 levels in the brain caused by acute infection with T. cruzi. These results suggest an anti-inflammatory activity of LOV, but more studies are needed to elucidate the role of LOV in CD acute infection. Full article
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12 pages, 283 KiB  
Communication
Blood Cadmium Level Is a Marker of Cancer Risk in Men
by Róża Derkacz, Wojciech Marciniak, Piotr Baszuk, Monika Wysokińska, Natalia Chrzanowska, Marcin Lener, Tomasz Huzarski, Jacek Gronwald, Tadeusz Dębniak, Cezary Cybulski, Anna Jakubowska, Rodney J. Scott and Jan Lubiński
Nutrients 2024, 16(9), 1309; https://doi.org/10.3390/nu16091309 (registering DOI) - 27 Apr 2024
Abstract
Cadmium (Cd) is a known carcinogen, but its impact on cancer risk at lower concentrations is poorly understood. Previous studies on Cd and cancer risk in men show inconsistent results, prompting further investigation. A prospective cohort study involving 2956 men was conducted. Blood [...] Read more.
Cadmium (Cd) is a known carcinogen, but its impact on cancer risk at lower concentrations is poorly understood. Previous studies on Cd and cancer risk in men show inconsistent results, prompting further investigation. A prospective cohort study involving 2956 men was conducted. Blood Cd levels were measured, and participants were followed for 78 months to assess cancer incidence. Men with high blood Cd levels (>0.71 µg/L) had a significantly increased risk of cancer compared to those with low levels (<0.19 µg/L) (HR 3.42, p < 0.001), particularly among non-smokers (HR 3.74, p = 0.003), individuals aged < 60 years (HR 2.79, p = 0.017), and ≥60 (HR 4.63, p = 0.004). The influence of smoking on cancer risk based on Cd levels was not significant in this study. Blood Cd levels may influence cancer risk in men, emphasizing the importance of minimizing Cd exposure to reduce risk. Confirmation of these results in other populations is essential for effective preventive measures against Cd-related cancers. Full article

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