SFX by Ex Libris Inc.

Title:	Grinder: a versatile amplicon and shotgun sequence simulator
Source:	Nucleic Acids Research [0305-1048] Angly, F E yr:2012

Basic

Full text

Full text available via PubMed Central

Year:

Volume:

Issue:

Start Page:

Document delivery

Request document via Library/Bibliothek

Users interested in this article also expressed an interest in the following:
description	1.	Mason, Olivia U. "Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill." The ISME journal 6.9 (2012): 1715-27.
description	2.	Senigl, F. "Transcriptional provirus silencing as a crosstalk of de novo DNA methylation and epigenomic features at the integration site." Nucleic acids research 40.12 (2012): 5298-5312.
description	3.	Diaz, P.I. I. "Using high throughput sequencing to explore the biodiversity in oral bacterial communities." Molecular Oral Microbiology 27.3 (2012): 182-201.
description	4.	Edgar, Robert C. "UCHIME improves sensitivity and speed of chimera detection." Bioinformatics 27.16 (2011): 2194-2200.
description	5.	Edgar, Robert C. "Search and clustering orders of magnitude faster than BLAST." Bioinformatics 26.19 (2010): 2460-2461.
description	6.	Frias-Lopez, J. "Microbial community gene expression in ocean surface waters." Proceedings of the National Academy of Sciences of the United States of America 105.10 (2008): 3805-3810.
description	7.	Douglas Inglis, G. "Molecular Methods to Measure Intestinal Bacteria: A Review." Journal of AOAC International 95.1 (2012): 5-5.
description	8.	Farrell, J. "Variations of oral microbiota are associated with pancreatic diseases including pancreatic cancer." Gut 61.4 (2011): 582-588.
description	9.	Kumar, Purnima S. "Target Region Selection Is a Critical Determinant of Community Fingerprints Generated by 16S Pyrosequencing." PLoS ONE 6.6 (2011).
description	10.	Kolenbrander, Paul E. "Oral multispecies biofilm development and the key role of cellâcell distance." Nature Reviews. Microbiology 8.7 (2010): 471-480.
description	11.	Yedavalli, V. "Methylation: a regulator of HIV-1 replication?" Retrovirology 4 (2007): 9-.
description	12.	Roark,, E. Brendan, E. "Extreme longevity in próteinaceous deep-sea corals." Proceedings of the National Academy of Sciences of the United States of America 106.13 (2009): 5204-5208.
description	13.	McGrath, K. "Isolation and analysis of mRNA from environmental microbial communities." Journal of microbiological methods 75.2: 172-176.
description	14.	Jost, L. "Entropy and diversity." Oikos 113.2 (2006): 363-375.
description	15.	Boe-Hansen, R. "Monitoring biofilm formation and activity in drinking water distribution networks under oligotrophic conditions." Water science and technology 47.5 (2003): 91-97.
description	16.	Faith, DP P. "Conservation evaluation and phylogenetic diversity." Biological conservation 61.1: 1-10.
description	17.	Wilkinson, P C C. "Assays of leukocyte locomotion and chemotaxis." Journal of immunological methods 216.1-2 (1998): 139-153.
description	18.	Claudianos, C. "A deficit of detoxification enzymes: pesticide sensitivity and environmental response in the honeybee." Insect molecular biology 15.5 (2006): 615-636.
description	19.	Bailly, J. "Soil eukaryotic functional diversity, a metatranscriptomic approach." ISME Journal - International Society for Microbial Ecology 1.7 (2007): 632-642.
description	20.	Shannon, P. "Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks." Genome research 13.11 (2003): 2498-2504.