Not logged in
PANGAEA.
Data Publisher for Earth & Environmental Science

Lim, Emily G; Harley, Christopher D G (2018): Seawater carbonate chemistry and heart rate of Caprellid amphipods [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.922070

Always quote citation above when using data! You can download the citation in several formats below.

RIS CitationBibTeX CitationShow MapGoogle Earth

Abstract:
Ocean acidification (OA) is one of the most significant threats to marine life, and is predicted to drive important changes in marine communities. Although OA impacts will be the sum of direct effects mediated by alterations of physiological rates and indirect effects mediated by shifts in species interactions and biogenic habitat provision, direct and indirect effects are rarely considered together for any given species. Here, we assess the potential direct and indirect effects of OA on a ubiquitous group of crustaceans: caprellid amphipods (Caprella laeviuscula and Caprella mutica). Direct physiological effects were assessed by measuring caprellid heart rate in response to acidification in the laboratory. Indirect effects were explored by quantifying caprellid habitat dependence on the hydroid Obelia dichotoma, which has been shown to be less abundant under experimental acidification. We found that OA resulted in elevated caprellid heart rates, suggestive of increased metabolic demand. We also found a strong, positive association between caprellid population size and the availability of OA-vulnerable O. dichotoma, suggesting that future losses of biogenic habitat may be an important indirect effect of OA on caprellids. For species such as caprellid amphipods, which have strong associations with biogenic habitat, a consideration of only direct or indirect effects could potentially misestimate the full impact of ocean acidification.
Keyword(s):
Animalia; Arthropoda; Benthic animals; Benthos; Bottles or small containers/Aquaria (<20 L); Caprella laeviuscula; Caprella mutica; Coast and continental shelf; Laboratory experiment; North Pacific; Other studied parameter or process; Single species; Temperate
Supplement to:
Lim, Emily G; Harley, Christopher D G (2018): Caprellid amphipods (Caprella spp.) are vulnerable to both physiological and habitat- mediated effects of ocean acidification. PeerJ, 6, e5327, https://doi.org/10.7717/peerj.5327
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2019): seacarb: seawater carbonate chemistry with R. R package version 3.2.12. https://CRAN.R-project.org/package=seacarb
Coverage:
Latitude: 49.291944 * Longitude: -122.890278
Date/Time Start: 2017-06-01T00:00:00 * Date/Time End: 2017-09-30T00:00:00
Event(s):
Reed_Point_Marina * Latitude: 49.291944 * Longitude: -122.890278 * Date/Time Start: 2017-06-01T00:00:00 * Date/Time End: 2017-09-30T00:00:00 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-07-07.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeLim, Emily Gstudy
2SpeciesSpeciesLim, Emily G
3Registration number of speciesReg spec noLim, Emily G
4Uniform resource locator/link to referenceURL refLim, Emily GWoRMS Aphia ID
5TreatmentTreatLim, Emily G
6IdentificationIDLim, Emily Gtank
7Time point, descriptiveTime pointLim, Emily Gvideo_length
8SizeSizecmLim, Emily G
9Time in secondsTimesLim, Emily G
10Numbern#Lim, Emily Gheartbeats_1
11Numbern#Lim, Emily Gheartbeats_2
12Numbern#Lim, Emily Gheartbeats_avg
13Heart beat rateHeart beat#/sLim, Emily G
14pHpHLim, Emily Gt1, NBS scale
15pHpHLim, Emily Gt2, NBS scale
16pHpHLim, Emily Gt3, NBS scale
17pHpHLim, Emily Gavrage, NBS scale
18Temperature, waterTemp°CLim, Emily Gt1
19Temperature, waterTemp°CLim, Emily Gt2
20Temperature, waterTemp°CLim, Emily Gt3
21Temperature, waterTemp°CLim, Emily Gavrage
22IdentificationIDLim, Emily Grope
23HabitatHabitatLim, Emily G
24IndividualsInd#Lim, Emily Gtotal_caprellids
25BlockBlockLim, Emily G
26NumberNoLim, Emily Gcolonies
27IndividualsInd#Lim, Emily Glaev_male
28IndividualsInd#Lim, Emily Glaev_female
29IndividualsInd#Lim, Emily Gmut_male
30IndividualsInd#Lim, Emily Gjuvenile
31LengthlcmLim, Emily Gtotal_stolon_length
32SalinitySalLim, Emily G1
33SalinitySalLim, Emily G2
34SalinitySalLim, Emily Gavrage
35Carbon, inorganic, dissolvedDICµmol/kgLim, Emily G
36Alkalinity, totalATµmol/kgLim, Emily GCalculated using CO2SYS
37Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmLim, Emily GCalculated using CO2SYS
38Bicarbonate ion[HCO3]-µmol/kgLim, Emily GCalculated using CO2SYS
39Calcite saturation stateOmega CalLim, Emily GCalculated using CO2SYS
40Aragonite saturation stateOmega ArgLim, Emily GCalculated using CO2SYS
41Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
42pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
43Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
44Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
45Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
46Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
47Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
48Alkalinity, totalATµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
49Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
50Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
6002 data points

Download Data

Download dataset as tab-delimited text — use the following character encoding:

View dataset as HTML (shows only first 2000 rows)