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Tripp-Valdez, Miguel Angel; Lucassen, Magnus; Lluch-Cota, Salvador E; Sicard, M Teresa; Lannig, Gisela; Pörtner, Hans-Otto (2017): Seawater carbonate chemistry and oxygen consumption, metabolite concentration [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.899865

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Keyword(s):
Animalia; Benthic animals; Benthos; Bottles or small containers/Aquaria (<20 L); Coast and continental shelf; Haliotis fulgens; Laboratory experiment; Mollusca; North Pacific; Other metabolic rates; Oxygen; Respiration; Single species; Temperate; Temperature
Related to:
Tripp-Valdez, Miguel Angel; Lucassen, Magnus; Lluch-Cota, Salvador E; Sicard, M Teresa; Lannig, Gisela; Pörtner, Hans-Otto (2017): Metabolic response and thermal tolerance of green abalone juveniles (Haliotis fulgens: Gastropoda) under acute hypoxia and hypercapnia. Journal of Experimental Marine Biology and Ecology, 497, 11-18, https://doi.org/10.1016/j.jembe.2017.09.002
Original version:
Tripp-Valdez, Miguel Angel; Bock, Christian; Lucassen, Magnus; Lluch-Cota, Salvador E; Sicard, M Teresa; Lannig, Gisela; Pörtner, Hans-Otto (2018): Whole-organism metabolic rate and cellular metabolic state of thermally challenged Haliotis fulgens juveniles under acute hypoxia and hypercapnia. Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, PANGAEA, https://doi.org/10.1594/PANGAEA.894877
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb
Project(s):
Ocean Acidification International Coordination Centre (OA-ICC)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2019-03-25.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeTripp-Valdez, Miguel Angelstudy
2SpeciesSpeciesTripp-Valdez, Miguel Angel
3Registration number of speciesReg spec noTripp-Valdez, Miguel Angel
4Uniform resource locator/link to referenceURL refTripp-Valdez, Miguel AngelWoRMS Aphia ID
5ExperimentExpTripp-Valdez, Miguel Angel
6TreatmentTreatTripp-Valdez, Miguel Angel
7Temperature, waterTemp°CTripp-Valdez, Miguel Angel
8Experiment dayExp daydayTripp-Valdez, Miguel Angel
9Metabolic rate of oxygenMR O2µmol/h/gTripp-Valdez, Miguel Angelper dry mass
10IdentificationIDTripp-Valdez, Miguel Angelindividual
11PositionPositionTripp-Valdez, Miguel Angel
12IdentificationIDTripp-Valdez, Miguel Angelsample
13ConcentrationConcrelative unitsTripp-Valdez, Miguel AngelATP
14ConcentrationConcrelative unitsTripp-Valdez, Miguel AngelAcetate
15ConcentrationConcrelative unitsTripp-Valdez, Miguel AngelAlanine
16ConcentrationConcrelative unitsTripp-Valdez, Miguel AngelArginine
17ConcentrationConcrelative unitsTripp-Valdez, Miguel AngelAspartate
18ConcentrationConcrelative unitsTripp-Valdez, Miguel AngelBetaine
19ConcentrationConcrelative unitsTripp-Valdez, Miguel AngelCarnitine
20ConcentrationConcrelative unitsTripp-Valdez, Miguel AngelGlutamate
21ConcentrationConcrelative unitsTripp-Valdez, Miguel AngelGlutamine
22ConcentrationConcrelative unitsTripp-Valdez, Miguel AngelGlycine
23ConcentrationConcrelative unitsTripp-Valdez, Miguel AngelHomarine
24ConcentrationConcrelative unitsTripp-Valdez, Miguel AngelIsoleucine
25ConcentrationConcrelative unitsTripp-Valdez, Miguel AngelLactate
26ConcentrationConcrelative unitsTripp-Valdez, Miguel AngelLeucine
27ConcentrationConcrelative unitsTripp-Valdez, Miguel AngelLysine
28ConcentrationConcrelative unitsTripp-Valdez, Miguel AngelN.N-Dimethylglycine
29ConcentrationConcrelative unitsTripp-Valdez, Miguel AngelSuccinate
30ConcentrationConcrelative unitsTripp-Valdez, Miguel AngelTaurine
31ConcentrationConcrelative unitsTripp-Valdez, Miguel AngelThreonine
32ConcentrationConcrelative unitsTripp-Valdez, Miguel AngelTyrosine
33ConcentrationConcrelative unitsTripp-Valdez, Miguel AngelValine
34Temperature, waterTemp°CTripp-Valdez, Miguel Angel
35Temperature, water, standard deviationTemp std dev±Tripp-Valdez, Miguel Angel
36SalinitySalTripp-Valdez, Miguel Angel
37Oxygen saturationO2 sat%Tripp-Valdez, Miguel Angel
38Oxygen saturation, standard deviationO2 sat std dev±Tripp-Valdez, Miguel Angel
39pHpHTripp-Valdez, Miguel AngelNBS scale
40Alkalinity, totalATµmol/kgTripp-Valdez, Miguel Angel
41Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmTripp-Valdez, Miguel Angel
42Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
43pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
44Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
45Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
46Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
47Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
48Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
49Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
50Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
51Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
17127 data points

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