Skip to main content
Log in

Gene mapping from a bovine 1;29 DNA library prepared with chromosome microdissection

  • Original Contributions
  • Published:
Mammalian Genome Aims and scope Submit manuscript

Abstract

Bovine gene mapping is progressing rapidly using syntenic group mapping based on somatic cell hybrids and linkage, and to a lesser extent on in situ hybridization. Single chromosome DNA libraries are a logical next step, and this was, therefore, the aim of our laboratory. Since we have access to several cattle with t(1;29) and this chromosome is readily distinguishable, we chose this as our first target—recognizing that we would not produce a “single” chromosome library in the strict sense because two autosomes are represented. We utilized an inverted microscope and a micromanipulator fitted with glass instruments pulled specifically to dissect off approximately 100 t(1:29) chromosomes per microdrop. A glass chamber made to accommodate a hanging drop was used to extract the DNA under a dissecting microscope. The DNA was then cleaved with EcoRI and inserted in λgtwes arms. Host cells were then infected with these phage and positive clones obtained. The first clone, isolated from this library by hybridization with a human collagen 6A1 cDNA, was mapped by in situ hybridization to bovine Chromosome (Chr) 1q12–q14, near the centromere. The second clone, an anonymous DNA fragment (D1S11), was mapped to 1q43–q46, near the terminal end.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Bishop, D.T., Williamson, J.A., Skolnick, M.H. (1983) A model for restriction fragment length distributions. Am J. Hum. Genet. 35, 795–815.

    Google Scholar 

  • Delabar, J.-M., Chettouh, Z., Rahmani, Z., Theophile, D., Blouin, J.-L., Bono, R., Kraus, J., Barton, J., Patterson, D., Sinet, P.-M. (1992). Gene-dosage mapping of 30 DNA markers on chromosome 21. Genomics 14, 887–889.

    Google Scholar 

  • Dixon, S.C., Miller, N.G.A., Tucker, E.M., Carter, N.P. (1991) Flow sorting of farm animal chromosomes. An. Genet. 22 (Suppl 1), 87.

    Google Scholar 

  • Drinkwater, R.D., Johnson, S.E., Barendse, W., Harrison, B., Womack, J.E., Hetzel, D.J.S. (1993). Isolation and mapping of a single locus minisatellite sequence marker to 1q36-qter and synteny group 10 in cattle, and to 1q36-qter in sheep. Genomics, in press.

  • Edström, J., Kaiser, R., Röhme, D. (1987) Microcloning of mammalian metaphase chromosomes. Methods Enzymol. 151, 503–517.

    Google Scholar 

  • Ewens, W.J., Griffiths, R.D., Ethier, S.N., Wilcox, S.A., Graves, J.A.M. (1992). Statistical analysis of in situ hybridization data: derivation and use of the Zmax test. Genomics 12:675–682.

    Google Scholar 

  • Fries, R., Solinas, S., Gunawardna, A. (1991). Chromosomal assignment of marker loci to monitor marker spacing. In Gene-Mapping Techniques and Applications, L.B. Shook, H.A. Lewin, eds. New York: Marcel Dekker, Inc., pp. 159–176.

    Google Scholar 

  • Fries, R., Eggen, A., Womack, J.E. (1993). The bovine genome map. Mammalian Genome 4, 405–428.

    Google Scholar 

  • Georges, M., Drinkwater, R., King, T., Mishra, A., Moore, S.S., Nielsen, D., Sargeant, L.S., Sorensen, A., Steele, M.R., Zhao, X., Womack, J.E., Hetzel, J. (1983). Microsatellite mapping of a gene affecting horn development in Bos taurus. Nature Genet. 3, 206–210.

    Google Scholar 

  • Johnson, D.H. (1990). Molecular cloning of DNA from specific chromosomal regions by microdissection and sequence-independent amplification of DNA. Genomics 6, 243–251.

    Google Scholar 

  • Langford, D.F., Telenius, H., Carter, N.P., Miller, N.G.A., Tucker, E.M. (1992) Chromosome painting using chromosome-specific probes from flow-sorted porcine chromosomes. An. Genet. 23 (Suppl. 1), 85.

    Google Scholar 

  • Lüdecke, H., Senger, G., Claussen, U., Horsthemke, B. (1989). Cloning defined regions of the human genome by microdissection of banded chromosomes and enzymatic amplification. Nature 338, 348–350.

    Google Scholar 

  • Lüdecke, H., Senger, G., Claussen, U., Horsthemke, B. (1990). Construction and characterization of band-specific DNA libraries. Hum. Genet. 84, 512–516.

    Google Scholar 

  • O'Brien, S.J., Womack, J.E., Lyons, L.A., Moore, K.J., Jenkins, N.A., Copeland, N.G. (1993). Anchored reference loci for comparative gene mapping in mammals. Nature Genet. 3, 103–112.

    Google Scholar 

  • Pardue, M.L. (1985). In situ hybridization. In Nucleic Acid Hybridization, A Practical Approach., B.D. Hames, S.J. Higgins, eds. Oxford: IRL Press, pp. 179–202.

    Google Scholar 

  • Röhme, D., Fox, H., Herrmann, B., Frischauf, A.-M., Erdström, J.E., Mains, P., Silver, L.M., Lehrach, H. (1984). Molecular clones of the mouse t complex derived from microdissected metaphase chromosomes. Cell 36, 783–788.

    Google Scholar 

  • Schmutz, S.M., Flood, P.F., Moker, J., Barth, A., Mapletoft, R., Cates, W. (1990). Incidence of chromosomal anomalies among western Canadian beef cattle. Can. J. An. Sci. 70, 779–783.

    Google Scholar 

  • Schmutz, S.M., Moker, J. (1989). Impact of a 1;29 Robertsonian translocation on a herd of purebred beef cattle. Can. J. An. Sci. 69, 891–896.

    Google Scholar 

  • Threadgill, D.S., Kraus, J.P., Krawetz, S.A., Womack, J.E. (1991). Evidence for the evolutionary origin of human chromosome 21 from comparative gene mapping in the cow and mouse. Proc. Natl. Acad. Sci. USA 88, 154–158.

    Google Scholar 

  • Tiemeier, D., Enquist, L., Leder, P. (1976). Improved derivative of a phage λEK2 vector for cloning recombinant DNA. Nature 263, 526–527.

    Google Scholar 

  • Yerle, M., Milan, D., Schmitz, A., Vaiman, M., Frelat, G., Gellin, J. (1992). Definite characterization of porcine flow karyotype by chromosome painting after PARM-PCR. An. Genet. 23, (Supp. 1), 88.

    Google Scholar 

  • Zhang, N., Womack, J.E. (1992). Synteny mapping in the bovine: genes from human chromosome 5. Genomics 14, 126–129.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Schmutz, S.M., Berryere, T.G., Moker, J.S. et al. Gene mapping from a bovine 1;29 DNA library prepared with chromosome microdissection. Mammalian Genome 5, 138–141 (1994). https://doi.org/10.1007/BF00352343

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00352343

Keywords

Navigation