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Evolutionary changes in protein composition — evidence for an optimal strategy

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Summary

The information contained in the composition of different proteins of the same family is analyzed. It is found that within each family the gain in information per amino acid replacement is constant. This finding is interpreted to imply that evolutionary changes in proteins follow an “optimal” path in the sense that they maximize the number of potentially functional sequences that can be generated by T accepted point mutations from a given protein, subject to restrictions due to biological function.

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References

  • Ben-Shaul, A., Hofacker, G.L. (1976). Statistical and Dynamical Models of Population Inversion. In: Handbook of Chemical Lasers, R.W.F. Gross and J.F. Bott, eds., pp. 579–617. New York: Wiley

    Google Scholar 

  • Berg, A. van den, Beintema, J.J. (1975). Nature253, 207–210

    Google Scholar 

  • Berg, A. van den, Hende-Timmer, L. van den, Beintema, J.J. (1976). BBA453, 400–409

    Google Scholar 

  • Berg, A. van den, Hende-Timmer, L. van den, Hofsteenge, J., Gaastra, W., Beintema, J.J. (1977). Eur. J. Biochem.75, 91–100

    Google Scholar 

  • Bogardt, R.A., Dwulet, F.E., Lehman, L.D., Jones, B.N., Gurd, F.R.N. (1976). Biochemistry15, 2597–2602

    Google Scholar 

  • Castillo, O., Lehmann, H. (1977). BBA492, 232–236

    Google Scholar 

  • Chirpich, T.P. (1975). Science188, 1022–1023

    Google Scholar 

  • Dayhoff, M.O., Dayhoff, R.E., Hunt, L.T. (1976). Compositions of Proteins. In: Atlas of Protein Sequence and Structure, M.O. Dayhoff, ed., Vol. 5, Suppl. 2, p. 301. Silver Spring, Maryland: National Biomedical Research Society

    Google Scholar 

  • Dayhoff, M.O., Eck, E.V., Park, C.M. (1972). A Model of Evolutionary Change in Proteins. In: Atlas of Protein Sequence and Structure, M.O. Dayhoff, ed., Vol. 5, pp. 89–99. Silver Spring, Maryland: National Biomedical Research Foundation

    Google Scholar 

  • Deconinck, M., Peiffer, S., Depreter, J., Paul, C., Schnek, A.G., Leonis, J. (1975). BBA386, 567–575

    Google Scholar 

  • Dumur, V., Dautrevaux, M., Han, K. (1976). BBA427, 759–761

    Google Scholar 

  • Dwulet, F.E., Bogardt, R.A., Jones, B.N., Lehman, L.D. (1975). Biochemistry14, 5336–5443

    Google Scholar 

  • Dwulet, F.E., Jones, B.N., Lehman, L.D., Gurd, F.R.N. (1977). Biochemistry16, 873–876

    Google Scholar 

  • Emmens, M., Welling, G.W., Beintema, J.J. (1976). Biochem. J.157, 317–323

    Google Scholar 

  • Finkelstein, A.V., Ptitsyn, O.B. (1971). J. Mol. Biol.62, 613–624

    Google Scholar 

  • Gatlin, L.L. (1972). Information Theory and the Living System, New York: Columbia Univ. Press

    Google Scholar 

  • Gatlin, L.L. (1974). J. Mol. Evol.3, 189–208

    Google Scholar 

  • Gatlin, L.L. (1976). J. Mol. Evol.7, 185–195

    Google Scholar 

  • Groen, G., Welling, G.W. Beintema, J.J. (1975). FEBS Lett.60, 300–304

    Google Scholar 

  • Hartley, R.V. (1928). Bell System Techn. J.7, 535–563

    Google Scholar 

  • Hase, T., Ohmiya, M., Matsubara, H., Mullinger, R.N., Rao, K.K., Hall, D.O. (1976a). Biochem. J.159, 55–63

    Google Scholar 

  • Hase, T., Wada, K., Ohmiya, M., Matsubara, H., (1976b). J. Biochem.80, 993–999

    Google Scholar 

  • Hase, T., Wakabayshi, S., Matsubara, H., Kerscher, L., Oesterhelt, D., Rao, K.K., Hall, D.O. (1977). FEBS Lett.77, 308–310

    Google Scholar 

  • Hasegawa, M., Yano, T.A. (1975). Origins of Life6, 219–227

    Google Scholar 

  • Hermann, J., Jollés, J., Buss, D.H., Jollés, P. (1973). J. Mol. Biol.79, 587–595

    Google Scholar 

  • Holmquist, R. (1975). J. Mol. Evol.4, 277–306

    Google Scholar 

  • Holmquist, R., Moise, H. (1975). J. Mol. Evol.6, 1–14

    Google Scholar 

  • Hopfinger, A.J. (1972). Currents in Mod. Biol. Biosystems5, 38–42

    Google Scholar 

  • Jollés, J., Schoentgen, F., Jollés, P., Prager, E.M., Wilson, A.C. (1976). J. Mol. Evol.8, 59–78

    Google Scholar 

  • Jones, B.N., Vigna, R.A., Dwulet, F.E., Bogardt, R.A., Lehman, L.D., Gurd, F.R.N. (1976). Biochemistry15, 4418–4422

    Google Scholar 

  • Jong, W.W. de, Gleaves, J.T., Boulter, D. (1977). J. Mol. Evol.10, 123–135

    Google Scholar 

  • Kimura, M. (1968). Nature217, 624–626

    Google Scholar 

  • King, J.L., Jukes, T.H. (1969). Science164, 788–798

    Google Scholar 

  • Kullback, S. (1959). Information Theory and Statistics, New York: Wiley

    Google Scholar 

  • Lehman, L.D., Dwulet, F.E., Bogardt, R.A., Jones, B.N., Gurd, F.R.N. (1977). Biochemistry16, 706–709

    Google Scholar 

  • Levine, R.D., Ben-Shaul, A. (1977). In: Chemical and Biochemical Applications of Lasers, C.B. Moore, ed., Vol. II, pp. 145–197, London: Academic Press

    Google Scholar 

  • Levine, R.D., Bernstein, R.B. (1974). Accts. Chem. Res.7, 393–400

    Google Scholar 

  • Lin, K.D., Kim, V.K., Chernoff, A.J. (1976). Biochem. Genet.14, 427–440

    Google Scholar 

  • Lyddiat, A., Boulter, D. (1976a). FEBS Lett.62, 85–88

    Google Scholar 

  • Lyddiat, A., Boulter, D. (1976b). FEBS Lett.67, 331–334

    Google Scholar 

  • Lyddiat, A., Boulter, D. (1977). Biochem. J.163, 333–338

    Google Scholar 

  • Martinez, G., Rochat, H., Ducet, G. (1974). FEBS Lett.47, 212–217

    Google Scholar 

  • Matsuda, G., Maita, T., Watanabe, B., Araya, A., Morokuma, K., Goodman, M., Prychodko, W. (1973). Hoppe-Seyler's Z. Physiol. Chem.354, 1153–1155

    Google Scholar 

  • Nagano, K. (1973). J. Mol. Biol.75, 401–420

    Google Scholar 

  • Ohta, T., Kimura, M. (1971a). J. Mol. Evol.1, 18–25

    Google Scholar 

  • Ohta, T., Kimura, M. (1971b). Science174, 150–153

    Google Scholar 

  • Reichert, T.A., Cohen, D.N., Wong, A.K.C. (1973). J. Theor. Biol.42, 245–261

    Google Scholar 

  • Renyi, A. (1962). Wahrscheinlichkeitsrechnung. Berlin-Ost: Deutscher Verlag der Wissenschaften (in English 1970: Probability Theory, Amsterdam: North-Holland)

    Google Scholar 

  • Romero-Herrera, A.E., Lehmann, H. (1974). BBA359, 236–241

    Google Scholar 

  • Romero-Herrera, A.E., Lehmann, H., Fakes, W. (1975a). BBA379, 13–21

    Google Scholar 

  • Romero-Herrera, A.E., Lehmann, H. (1975b), BBA393, 205–214

    Google Scholar 

  • Romero-Herrera, A.E., Lehmann, H. (1975c). BBA400, 387–398

    Google Scholar 

  • Romero-Herrera, A.E., Lehmann, H., Castillo, O. (1976a). BBA420, 387–396

    Google Scholar 

  • Romero-Herrera, A.E., Lehmann, H., Castillo, O. (1976b). BBA439, 51–54

    Google Scholar 

  • Rousseaux, J., Dautrevaux, M., Han, K. (1976). BBA439, 55–62

    Google Scholar 

  • Schlögl, F. (1975). Z. PhysikB 20, 177–184

    Google Scholar 

  • Shannon, C.E., Weaver, W. (1949). The Mathematical Theory of Communication, Univ. of Illinois Press, Urbana

    Google Scholar 

  • Smith, T.F. (1969). Math. Biosciences4, 179–187

    Google Scholar 

  • Stenzel, P. (1974). Nature252, 62–63

    Google Scholar 

  • Takei, H., Ota, Y., Wu, K.C., Kiyohara, T., Matsuda, G. (1975). J. Biochem.77, 1345–1347

    Google Scholar 

  • Tanaka, M., Haniu, M., Yasunobu, K.T., Evans, M.C.W., Rao, K.K. (1975). Biochemistry14, 1938–1943

    Google Scholar 

  • Tentori, L., Vivaldi, G., Carta, S., Marinucci, M., Massa, A., Antonini, N.E., Brunori, M. (1973). I.J. Pept. Prot. Res.5, 187–200

    Google Scholar 

  • Vogel, H. (1975). J. Mol. Evol.6, 271–283

    Google Scholar 

  • Vogel, H. Zuckerkandl, E. (1971). In: Molecular Evolution, E. Schofeniels, ed., Vol. II, pp. 352–365

  • Wada, K., Hase, T., Tokunaga, H., Matsubara, H. (1975). FEBS Lett.55, 102–104

    Google Scholar 

  • Welling, G.W., Groen, G., Beintema, J.J. (1975). Biochem. J.147, 505–511

    Google Scholar 

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Coutelle, R., Hofacker, G.L. & Levine, R.D. Evolutionary changes in protein composition — evidence for an optimal strategy. J Mol Evol 13, 57–72 (1979). https://doi.org/10.1007/BF01732754

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