Skip to main content
Log in

Degradation of benzoate via benzoyl-coenzyme A and gentisate by Bacillus stearothermophilus PK1, and purification of gentisate 1,2-dioxygenase

  • Original Paper
  • Published:
Biology and Fertility of Soils Aims and scope Submit manuscript

Abstract

The thermophilic Bacillus stearothermophilus PK1 utilized benzoate, 3-hydroxybenzoate, and gentisate as sole source of carbon and energy. 2- and 4-Hydroxybenzoate, 2,3- and 3,4-dihydroxybenzoate, and catechol did not support growth. Degradation of benzoate proceeded via benzoyl-coenzyme A (benzoyl-CoA) and gentisate. The inducible benzoyl-CoA ligase converted benzoate but not 3-hydroxybenzoate to its coenzyme A thioester. Gentisate 1,2-dioxygenase from B. stearothermophilus PK1 was purified to homogeneity. The enzyme is presumed to be a homohexamer with a subunit molecular mass of 40 kDa. It showed maximal activity at 65–70°C. After incubation for 80 min at 65°C, 50% of the original activity was lost. Gentisate 1,2-dioxygenase activity from strain PK1 was strictly dependent on exogenously added Fe2+, and it was inhibited by metal-chelating agents, indicating an essential role of Fe2+ in catalysis.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Adams D, Ribbons DW (1988) The metabolism of aromatic compounds by thermophilic bacilli. Appl Biochem Biotechnol 17:231–244

    Google Scholar 

  • Altenschmidt U, Oswald B, Fuchs G (1991) Purification and characterization of benzoate-coenzyme A ligase and 2-aminobenzoatecoenzyme A ligases from a denitrifying Pseudomonas sp. J Bacteriol 173:5494–5501

    Google Scholar 

  • Altenschmidt U, Oswald B, Steiner E, Herrmann H, Fuchs G (1993) New aerobic benzoate oxidation pathway via benzoyl-coenzyme A in a denitrifying Pseudomonas sp. J Bacteriol 175:4851–4858

    Google Scholar 

  • Atkinson A, Bradford PA, Selmes IP (1973) Large-scale preparation of chromatographic grade hydroxylapatite and its application in protein separating procedures. J Appl Chem Biotechnol 23:517–529

    Google Scholar 

  • Bradford MM (1976) A rapid and sensitive method for the quantification of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 131:373–378

    Google Scholar 

  • Buswell JA, Clark JS (1976) Oxidation of aromatic acids by a facultative thermophilic Bacillus sp, J Gen Microbiol 96:209–213

    Google Scholar 

  • Buswell JA, Twomey DG (1975) Utilization of phenol and cresols by Bacillus stearothermophilus, strain pH 24. J Gen Microbiol 87:377–379

    Google Scholar 

  • Chang K-H, Liang P-H, Beck W, Scholten JD, Dunaway-Mariano D (1992) Isolation and characterization of the three polypeptide components of 4-chlorobenzoate dehalogenase from Pseudomonas sp. strain CBS-3. Biochemistry 31:5605–5610

    Google Scholar 

  • Clark JS, Buswell JA (1979) Catabolism of gentisic acid by two strains of Bacillus stearothermophilus. J Gen Microbiol 112:191–195

    Google Scholar 

  • Crawford RL (1975) Degradation of 3-hydroxybenzoate by bacteria of the genus Bacillus. Appl Microbiol 30:439–444

    Google Scholar 

  • Crawford RL, Hutton SW, Chapman PJ (1975) Purification and properties of gentisate 1,2-dioxygenase from Moraxella osloensis. J Bacteriol 121:794–799

    Google Scholar 

  • Dagley S (1978) Pathways for the utilization of organic growth substrates. In: Gunsalus IC, Ornston LN, Sokatch JR (eds) The bacteria, vol VI: Bacterial diversity. Academic, New York, pp 305–388

    Google Scholar 

  • Dembek G, Lingens F (1988) Isolation and characterization of the meta-cleavage product in the degradation of quinaldic acid by Azotobacter sp. FEMS Microbiol Lett 56:261–264

    Google Scholar 

  • Elder DJE, Kelly DJ (1994) The bacterial degradation of benzoic acid and benzenoid compounds under anaerobic conditions: unifying trends and new perspectives. FEMS Microbiol Rev 13:441–468

    Google Scholar 

  • Evans WC, Fuchs G (1988) Anaerobic degradation of aromatic compounds. Ann Rev Microbiol 42:289–317

    Google Scholar 

  • Geissler JF, Harwood CS, Gibson J (1988) Purification and properties of benzoate-coenzyme A ligase, a Rhodopseudomonas palustris enzyme involved in the anaerobic degradation of benzoate. J Bacteriol 170:1709–1714

    Google Scholar 

  • Gibson J, Dispensa M, Fogg GC, Evans DT, Harwood CS (1994) 4-Hydroxybenzoate-coenzyme A ligase from Rhodopseudomonas palustris: purification, gene sequence, and role in anaerobic degradation. J Bacteriol 176:634–641

    Google Scholar 

  • Groseclose EE, Ribbons DW (1973) 3-Hydroxybenzoate 6-hydroxylase from Pseudomonas aeruginosa. Biochem Biophys Res Comun 55:897–903

    Google Scholar 

  • Hames BD (1990) In: Hames BD, Rickwood D (eds) Gel electrophoresis of proteins, 2nd edn. IRL Press, Oxford, p 36

    Google Scholar 

  • Harpel MR, Lipscomb JD (1990 a) Gentisate 1,2-dioxygenase from Pseudomonas. Purification, characterization, and comparison of the enzymes from Pseudomonas testosteroni and Pseudomonas acidovorans. J Biol Chem 265:6301–6311

    Google Scholar 

  • Harpel MR, Lipscomb JD (1990 b) Gentisate 1,2-dioxygenase from Pseudomonas. Substrate coordination to active site Fe2+ and mechanism of turnover. J Biol Chem 265:22187–22196

    Google Scholar 

  • Krieg NR, Holt JG (eds) Bergey's manual of systematic bacteriology, vol. I (1984) Williams & Wilkins, Baltimore

    Google Scholar 

  • Lack L (1959) The enzymic oxidation of gentisic acid. Biochim Biophys Acta 34:117–123

    Google Scholar 

  • Löffler F, Müller R (1991) Identification of 4-chlorobenzoyl-coenzyme A as intermediate in the dehalogenation catalyzed by 4-chlorobenzoate dehalogenase from Pseudomonas sp. CBS3. FEBS Lett 290:224–226

    Google Scholar 

  • Martinez-Blanco H, Reglero A, Rodriguez-Aparicio L, Luengo JM (1990) Purification and biochemical characterization of phenylacetyl-CoA ligase from Pseudomonas putida. J Biol Chem 265:7084–7090

    Google Scholar 

  • Niemetz R, Altenschmidt U, Brucker S, Fuchs G (1994) Benzoylcoenzyme A 3-monooxygenase, a flavin-dependent hydroxylase. Eur J Biochem 227:161–168

    Google Scholar 

  • Poh CL, Bayly RC (1980) Evidence for isofunctional enzymes used in m-cresol and 2,5-xylenol degradation via the gentisate pathway in Pseudomonas alcaligenes. J Bacteriol 143:59–69

    Google Scholar 

  • Rajasekharan S, Rajasekharan R, Vaidyanathan CS (1990) Substrate-mediated purification and characterization of 3-hydroxybenzoic acid 6-hydroxylase from Micrococcus. Arch Biochem Biophys 278:21–25

    Google Scholar 

  • Reis KH, Kutzner HJ (1991) Abbau von hydroxy-und halogenierten Benzoesäuren durch Actinomyceten. GWF Wasser/Abwasser 132:422–423

    Google Scholar 

  • Schägger H, von Jagow G (1987) Tricine-sodium dodecyl sulphate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa. Anal Biochem 166:368–379

    Google Scholar 

  • Sneath PHA, Mair NS, Sharpe ME, Holt JG (eds) (1986) Bergey's manual of systematic bacteriology, vol. II. Williams & Wilkins, Baltimore

    Google Scholar 

  • Starr MP, Stolp H, Trüper HG, Balows A, Schlegel HG (eds) (1981) The prokaryotes, Vols I, II. Springer, Berlin Heidelberg New York

    Google Scholar 

  • Suárez M, Ferrer E, Garrido-Pertierra A, Martin M (1995) Purification and characterization of the 3-hydroxybenzoate 6-hydroxylase from Klebsiella pneumoniae. FEMS Microbiol Lett 126:283–290

    Google Scholar 

  • Suemori A, Kurane R, Tomizuka N (1993) Purification and properties of gentisate 1,2-dioxygenase from Rhodococcus erythropolis S-1. Biosci Biotechnol Biochem 57:1781–1783

    Google Scholar 

  • Sugiyama S-I, Yano K, Tanaka H, Komagata K, Arima K (1958) Metabolism of aromatic compounds by bacteria. I Gentisic acid oxidase and protocatechuic acid oxidase of Pseudomonas ovalis S-5. J Gen Appl Microbiol 4:223–240

    Google Scholar 

  • van Berkel WJH, van den Tweel WJJ (1991) Purification and characterization of 3-hydroxyphenylacetate 6-hydroxylase: a novel FAD-dependent monooxygenase from a Flavobacterium species. Eur J Biochem 201:585–592

    Google Scholar 

  • Vitovski S (1993) Phenylacetate-coenzyme A ligase is induced during growth on phenylacetic acid in different bacteria of several genera. FEMS Microbiol Lett 108:1–6

    Google Scholar 

  • Wang L-H, Hamzah RY, Yu Y, Tu S-C (1987) Pseudomonas cepacia 3-hydroxybenzoate 6-hydroxylase: induction, purification and characterization Biochemistry 26:1099–1104

    Google Scholar 

  • Webster LT, Mieyal JJ, Siddiqui UA (1974) Benzoyl and hydroxybenzoyl esters of coezyme A. Ultraviolet characterization and reaction mechanism. J Biol Chem 249:2641–2645

    Google Scholar 

  • Wheelis ML, Palleroni NJ, Stanier RY (1967) The metabolism of aromatic acids by Pseudomonas testosteroni and Pseudomonas acidovorans. Arch Microbiol 59:302–314

    Google Scholar 

  • Ziegler K, Braun K, Böckler A, Fuchs G (1987) Studies on the anaerobic degradation of benzoic acid and 2-aminobenzoic acid by a denitrifying Pseudomonas strain. Arch Microbiol 149:62–69

    Google Scholar 

  • Ziegler K, Buder R, Winter J, Fuchs G (1989) Activation of aromatic acids and aerobic 2-aminobenzoate metabolism in a denitrifying Pseudomonas strain. Arch Microbiol 151:171–176

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Additional information

Dedicated to Professor J. C. G. Ottow on the occasion of his 60th birthday

Rights and permissions

Reprints and permissions

About this article

Cite this article

Kiemer, P., Tshisuaka, B., Fetzner, S. et al. Degradation of benzoate via benzoyl-coenzyme A and gentisate by Bacillus stearothermophilus PK1, and purification of gentisate 1,2-dioxygenase. Biol Fertil Soils 23, 307–313 (1996). https://doi.org/10.1007/BF00335959

Download citation

  • Received:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00335959

Key words

Navigation