Analytical structure, dynamics, and coarse graining of a kinetic model of an active fluid

Tong Gao, Meredith D. Betterton, An-Sheng Jhang, and Michael J. Shelley
Phys. Rev. Fluids 2, 093302 – Published 8 September 2017
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Abstract

We analyze one of the simplest active suspensions with complex dynamics: a suspension of immotile “extensor” particles that exert active extensile dipolar stresses on the fluid in which they are immersed. This is relevant to several experimental systems, such as recently studied tripartite rods that create extensile flows by consuming a chemical fuel. We first describe the system through a Doi-Onsager kinetic theory based on microscopic modeling. This theory captures the active stresses produced by the particles that can drive hydrodynamic instabilities, as well as the steric interactions of rodlike particles that lead to nematic alignment. This active nematic system yields complex flows and disclination defect dynamics very similar to phenomenological Landau–deGennes Q-tensor theories for active nematic fluids, as well as by more complex Doi-Onsager theories for polar microtubule–motor-protein systems. We apply the quasiequilibrium Bingham closure, used to study suspensions of passive microscopic rods, to develop a nonstandard Q-tensor theory. We demonstrate through simulation that this BQ-tensor theory gives an excellent analytical and statistical accounting of the suspension's complex dynamics, at a far reduced computational cost. Finally, we apply the BQ-tensor model to study the dynamics of extensor suspensions in circular and biconcave domains. In circular domains, we reproduce previous results for systems with weak nematic alignment, but for strong alignment we find unusual dynamics with activity-controlled defect production and absorption at the boundaries of the domain. In biconcave domains, a Fredericks-like transition occurs as the width of the neck connecting the two disks is varied.

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  • Received 2 March 2017

DOI:https://doi.org/10.1103/PhysRevFluids.2.093302

©2017 American Physical Society

Physics Subject Headings (PhySH)

Fluid DynamicsCondensed Matter, Materials & Applied PhysicsPolymers & Soft Matter

Authors & Affiliations

Tong Gao

  • Department of Mechanical Engineering and Department of Computational Mathematics, Science and Engineering, Michigan State University, East Lansing, Michigan 48824, USA

Meredith D. Betterton

  • Department of Physics, University of Colorado at Boulder, Boulder, Colorado 80309, USA

An-Sheng Jhang

  • Courant Institute of Mathematical Sciences, New York University, New York 10012, USA

Michael J. Shelley

  • Courant Institute of Mathematical Sciences, New York University, New York 10012, USA and Center for Computational Biology, Flatiron Institute, New York 10010, USA

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Issue

Vol. 2, Iss. 9 — September 2017

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