The 2023 MDPI Annual Report has
been released!
 
14 pages, 5830 KiB  
Article
Detection of Dangerous Human Behavior by Using Optical Flow and Hybrid Deep Learning
by Laith Mohammed Salim and Yuksel Celik
Electronics 2024, 13(11), 2116; https://doi.org/10.3390/electronics13112116 (registering DOI) - 29 May 2024
Abstract
Dangerous human behavior in the driving sense may cause traffic accidents and even cause economic losses and casualties. Accurate identification of dangerous human behavior can prevent potential risks. To solve the problem of difficulty retaining the temporal characteristics of the existing data, this [...] Read more.
Dangerous human behavior in the driving sense may cause traffic accidents and even cause economic losses and casualties. Accurate identification of dangerous human behavior can prevent potential risks. To solve the problem of difficulty retaining the temporal characteristics of the existing data, this paper proposes a human behavior recognition model based on utilized optical flow and hybrid deep learning model-based 3D CNN-LSTM in stacked autoencoder and uses the abnormal behavior of humans in real traffic scenes to verify the proposed model. This model was tested using HMDB51 datasets and JAAD dataset and compared with the recent related works. For a quantitative test, the HMDB51 dataset was used to train and test models for human behavior. Experimental results show that the proposed model achieved good accuracy of about 86.86%, which outperforms recent works. For qualitative analysis, we depend on the initial annotations of walking movements in the JAAD dataset to streamline the annotating process to identify transitions, where we take into consideration flow direction, if it is cross-vehicle motion (to be dangerous) or if it is parallel to vehicle motion (to be of no danger). The results show that the model can effectively identify dangerous behaviors of humans and then test on the moving vehicle scene. Full article
(This article belongs to the Special Issue Machine Learning Techniques for Image Processing)
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10 pages, 17408 KiB  
Article
A New Fractional Discrete Memristive Map with Variable Order and Hidden Dynamics
by Othman Abdullah Almatroud, Amina-Aicha Khennaoui, Adel Ouannas, Saleh Alshammari and Sahar Albosaily
Fractal Fract. 2024, 8(6), 322; https://doi.org/10.3390/fractalfract8060322 (registering DOI) - 29 May 2024
Abstract
This paper introduces and explores the dynamics of a novel three-dimensional (3D) fractional map with hidden dynamics. The map is constructed through the integration of a discrete sinusoidal memristive into a discrete Duffing map. Moreover, a mathematical operator, namely, a fractional variable-order Caputo-like [...] Read more.
This paper introduces and explores the dynamics of a novel three-dimensional (3D) fractional map with hidden dynamics. The map is constructed through the integration of a discrete sinusoidal memristive into a discrete Duffing map. Moreover, a mathematical operator, namely, a fractional variable-order Caputo-like difference operator, is employed to establish the fractional form of the map with short memory. The numerical simulation results highlight its excellent dynamical behavior, revealing that the addition of the piecewise fractional order makes the memristive-based Duffing map even more chaotic. It is characterized by distinct features, including the absence of an equilibrium point and the presence of multiple hidden chaotic attractors. Full article
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28 pages, 9412 KiB  
Article
Deciphering Abnormal Platelet Subpopulations in COVID-19, Sepsis and Systemic Lupus Erythematosus through Machine Learning and Single-Cell Transcriptomics
by Xinru Qiu, Meera G Nair, Lukasz Jaroszewski and Adam Godzik
Int. J. Mol. Sci. 2024, 25(11), 5941; https://doi.org/10.3390/ijms25115941 (registering DOI) - 29 May 2024
Abstract
This study focuses on understanding the transcriptional heterogeneity of activated platelets and its impact on diseases such as sepsis, COVID-19, and systemic lupus erythematosus (SLE). Recognizing the limited knowledge in this area, our research aims to dissect the complex transcriptional profiles of activated [...] Read more.
This study focuses on understanding the transcriptional heterogeneity of activated platelets and its impact on diseases such as sepsis, COVID-19, and systemic lupus erythematosus (SLE). Recognizing the limited knowledge in this area, our research aims to dissect the complex transcriptional profiles of activated platelets to aid in developing targeted therapies for abnormal and pathogenic platelet subtypes. We analyzed single-cell transcriptional profiles from 47,977 platelets derived from 413 samples of patients with these diseases, utilizing Deep Neural Network (DNN) and eXtreme Gradient Boosting (XGB) to distinguish transcriptomic signatures predictive of fatal or survival outcomes. Our approach included source data annotations and platelet markers, along with SingleR and Seurat for comprehensive profiling. Additionally, we employed Uniform Manifold Approximation and Projection (UMAP) for effective dimensionality reduction and visualization, aiding in the identification of various platelet subtypes and their relation to disease severity and patient outcomes. Our results highlighted distinct platelet subpopulations that correlate with disease severity, revealing that changes in platelet transcription patterns can intensify endotheliopathy, increasing the risk of coagulation in fatal cases. Moreover, these changes may impact lymphocyte function, indicating a more extensive role for platelets in inflammatory and immune responses. This study identifies crucial biomarkers of platelet heterogeneity in serious health conditions, paving the way for innovative therapeutic approaches targeting platelet activation, which could improve patient outcomes in diseases characterized by altered platelet function. Full article
(This article belongs to the Special Issue New Advances in Platelet Biology and Functions: 2nd Edition)
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14 pages, 1691 KiB  
Article
Genome Size Variation in Sesamum indicum L. Germplasm from Niger
by Najat Takvorian, Hamissou Zangui, Abdel Kader Naino Jika, Aïda Alouane and Sonja Siljak-Yakovlev
Genes 2024, 15(6), 711; https://doi.org/10.3390/genes15060711 (registering DOI) - 29 May 2024
Abstract
Sesamum indicum L. (Pedaliaceae) is one of the most economically important oil crops in the world, thanks to the high oil content of its seeds and its nutritional value. It is cultivated all over the world, mainly in Asia and Africa. Well adapted [...] Read more.
Sesamum indicum L. (Pedaliaceae) is one of the most economically important oil crops in the world, thanks to the high oil content of its seeds and its nutritional value. It is cultivated all over the world, mainly in Asia and Africa. Well adapted to arid environments, sesame offers a good opportunity as an alternative subsistence crop for farmers in Africa, particularly Niger, to cope with climate change. For the first time, the variation in genome size among 75 accessions of the Nigerien germplasm was studied. The sample was collected throughout Niger, revealing various morphological, biochemical and phenological traits. For comparison, an additional accession from Thailand was evaluated as an available Asian representative. In the Niger sample, the 2C DNA value ranged from 0.77 to 1 pg (753 to 978 Mbp), with an average of 0.85 ± 0.037 pg (831 Mbp). Statistical analysis showed a significant difference in 2C DNA values among 58 pairs of Niger accessions (p-value < 0.05). This significant variation indicates the likely genetic diversity of sesame germplasm, offering valuable insights into its possible potential for climate-resilient agriculture. Our results therefore raise a fundamental question: is intraspecific variability in the genome size of Nigerien sesame correlated with specific morphological and physiological traits? Full article
(This article belongs to the Special Issue Commemorating the Launch of the Section "Cytogenomics")
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11 pages, 1007 KiB  
Article
The Impact of the Withdrawal of SGLT2 Inhibitors on Clinical Outcomes in Patients with Heart Failure
by Masaki Nakagaito, Teruhiko Imamura, Ryuichi Ushijima, Makiko Nakamura and Koichiro Kinugawa
J. Clin. Med. 2024, 13(11), 3196; https://doi.org/10.3390/jcm13113196 (registering DOI) - 29 May 2024
Abstract
Background: The clinical impact of the withdrawal of sodium–glucose cotransporter 2 inhibitors (SGLT2i) on all-cause readmission in patients with heart failure remains unknown. Methods: We enrolled a total of 212 consecutive patients who were hospitalized for heart failure and received SGLT2i [...] Read more.
Background: The clinical impact of the withdrawal of sodium–glucose cotransporter 2 inhibitors (SGLT2i) on all-cause readmission in patients with heart failure remains unknown. Methods: We enrolled a total of 212 consecutive patients who were hospitalized for heart failure and received SGLT2i during their index hospitalization between February 2016 and July 2022. Of these patients, 51 terminated SGLT2i during or after their index hospitalization. We evaluated the prognostic impact of the withdrawal of SGLT2i on the primary outcome, which was defined as the all-cause readmission rate/times. Results: Over a median of 23.2 months, all-cause readmission occurred in 38 out of 51 patients (74.5%) withdrawn from SGLT2i and 93 out of 161 patients (57.8%) with continuation of SGLT2i (p = 0.099). The incidence of all-cause readmissions per year was 0.97 [0–1.50] in patients withdrawn from SGLT2i and 0.50 [0–1.03] in patients with continuation of SGLT2i (p = 0.030). There was no significant difference in total medical costs (62,906 [502–187,246] versus 29,236 [7920–180,305] JPY per month, p = 0.866) between both patient groups. Conclusions: Termination of SGLT2i may be associated with incremental all-cause readmission and no benefit in reducing total medical costs. Full article
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14 pages, 2203 KiB  
Article
The Role of Senescent CD8+T Cells in the Pathogenesis of Disseminated Leishmaniasis
by Cayo A. Abreu, Maurício Teixeira Nascimento, Olívia Bacellar, Lucas Pedreira Carvalho, Edgar Marcelino Carvalho and Thiago Marconi Cardoso
Pathogens 2024, 13(6), 460; https://doi.org/10.3390/pathogens13060460 (registering DOI) - 29 May 2024
Abstract
Disseminated leishmaniasis (DL) caused by L. braziliensis is characterized by the presence of 10 to more than 1000 lesions spread on the body. While protection against Leishmania is mediated by macrophages upon activation by IFN-γ produced by CD4+T cells, the pathology [...] Read more.
Disseminated leishmaniasis (DL) caused by L. braziliensis is characterized by the presence of 10 to more than 1000 lesions spread on the body. While protection against Leishmania is mediated by macrophages upon activation by IFN-γ produced by CD4+T cells, the pathology of disseminated leishmaniasis (DL) could be mediated by macrophages, NK, and CD8+T cells. Herein, we evaluate the participation of senescent CD8+T cells in the pathogenesis of DL. Methods: Peripheral blood mononuclear cells (PBMCs), biopsies, co-cultures of CD8+T cells with uninfected and infected macrophages (MØ), and PBMC cultures stimulated with soluble L. braziliensis antigen (SLA) for 72 h from patients with cutaneous leishmaniasis (CL) and DL were used to characterize senescent CD8+T cells. Statistical analysis was performed using the Mann–Whitney and Kruskal–Wallis tests, followed by Dunn’s. Results: Patients with DL have an increase in the frequency of circulating CD8+T cells that present a memory/senescent phenotype, while lesions from DL patients have an increase in the frequency of infiltrating CD8+T cells with a senescent/degranulation phenotype. In addition, after specific stimuli, DL patients’ circulating CD8+T with memory/senescent profile, showing degranulation characteristics, increased upon SLA stimuli, and those specific CD8+T cells from DL patients had an increased degranulation phenotype, causing more apoptosis of infected target cells. Conclusions: DL patients show a higher frequency of cytotoxic senescent CD8+T cells compared to CL patients, and that could promote the lysis of infected cells, although without parasite killing, releasing Leishmania to the extracellular compartment, contributing to the spread of parasites. Full article
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22 pages, 420 KiB  
Article
Estimation of Marshall–Olkin Extended Generalized Extreme Value Distribution Parameters under Progressive Type-II Censoring by Using a Genetic Algorithm
by Rasha Abd El-Wahab Attwa, Shimaa Wasfy Sadk and Taha Radwan
Symmetry 2024, 16(6), 669; https://doi.org/10.3390/sym16060669 (registering DOI) - 29 May 2024
Abstract
In this article, we consider the statistical analysis of the parameter estimation of the Marshall–Olkin extended generalized extreme value under liner normalization distribution (MO-GEVL) within the context of progressively type-II censored data. The progressively type-II censored data are considered for three specific distribution [...] Read more.
In this article, we consider the statistical analysis of the parameter estimation of the Marshall–Olkin extended generalized extreme value under liner normalization distribution (MO-GEVL) within the context of progressively type-II censored data. The progressively type-II censored data are considered for three specific distribution patterns: fixed, discrete uniform, and binomial random removal. The challenge lies in the computation of maximum likelihood estimations (MLEs), as there is no straightforward analytical solution. The classical numerical methods are considered inadequate for solving the complex MLE equation system, leading to the necessity of employing artificial intelligence algorithms. This article utilizes the genetic algorithm (GA) to overcome this difficulty. This article considers parameter estimation through both maximum likelihood and Bayesian methods. For the MLE, the confidence intervals of the parameters are calculated using the Fisher information matrix. In the Bayesian estimation, the Lindley approximation is applied, considering LINEX loss functions and square error loss, suitable for both non-informative and informative contexts. The effectiveness and applicability of these proposed methods are demonstrated through numerical simulations and practical real-data examples. Full article
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13 pages, 2270 KiB  
Article
GRAAL: Graph-Based Retrieval for Collecting Related Passages across Multiple Documents
by Misael Mongiovì and Aldo Gangemi
Information 2024, 15(6), 318; https://doi.org/10.3390/info15060318 (registering DOI) - 29 May 2024
Abstract
Finding passages related to a sentence over a large collection of text documents is a fundamental task for claim verification and open-domain question answering. For instance, a common approach for verifying a claim is to extract short snippets of relevant text from a [...] Read more.
Finding passages related to a sentence over a large collection of text documents is a fundamental task for claim verification and open-domain question answering. For instance, a common approach for verifying a claim is to extract short snippets of relevant text from a collection of reference documents and provide them as input to a natural language inference machine that determines whether the claim can be deduced or refuted. Available approaches struggle when several pieces of evidence from different documents need to be combined to make an inference, as individual documents often have a low relevance with the input and are therefore excluded. We propose GRAAL (GRAph-based retrievAL), a novel graph-based approach that outlines the relevant evidence as a subgraph of a large graph that summarizes the whole corpus. We assess the validity of this approach by building a large graph that represents co-occurring entity mentions on a corpus of Wikipedia pages and using this graph to identify candidate text relevant to a claim across multiple pages. Our experiments on a subset of FEVER, a popular benchmark, show that the proposed approach is effective in identifying short passages related to a claim from multiple documents. Full article
(This article belongs to the Special Issue 2nd Edition of Information Retrieval and Social Media Mining)
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18 pages, 530 KiB  
Review
Can ‘What Is Known’ about Social Isolation and Loneliness Interventions Sufficiently Inform the Clinical Practice of Health Care and Social Service Professionals Who Work with Older Adults? Exploring Knowledge-to-Practice Gaps
by Salinda Horgan, Jeanette Prorok, David Conn, Claire Checkland, John Saunders, Bette Watson-Borg and Lisa Tinley
Healthcare 2024, 12(11), 1111; https://doi.org/10.3390/healthcare12111111 (registering DOI) - 29 May 2024
Abstract
Establishing intervention effectiveness is an important component of a broader knowledge translation (KT) process. However, mobilizing the implementation of these interventions into practice is perhaps the most important aspect of the KT cycle. The purpose of the current study was to conduct an [...] Read more.
Establishing intervention effectiveness is an important component of a broader knowledge translation (KT) process. However, mobilizing the implementation of these interventions into practice is perhaps the most important aspect of the KT cycle. The purpose of the current study was to conduct an umbrella review to (a) identify promising interventions for SI&L in older adults, (b) interpret (translate) the findings to inform clinical knowledge and practice interventions in different settings and contexts, and (c) highlight research gaps that may hinder the uptake of these interventions in practice. The broader purpose of this study was to inform evidence-based clinical practice guidelines on SI&L for HCSSPs. In line with other reviews, our study noted variations in methods and intervention designs that prohibit definitive statements about intervention effectiveness. Perhaps, the most significant contribution of the current review was in identifying knowledge-to-practice gaps that inhibit the implementation of interventions into practice-based realities. Full article
(This article belongs to the Special Issue Assessment and Analysis of Healthcare Systems)
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10 pages, 244 KiB  
Article
Characterization of Removal Reasons for Nurse Sows and the Associated Removal Due to Their Extended Lactation Length in Hyperprolific Farrow-Wean Herds
by Joab Malanda Osotsi, Peter Balogh and Gabriella Novotnine-Danko
Animals 2024, 14(11), 1607; https://doi.org/10.3390/ani14111607 (registering DOI) - 29 May 2024
Abstract
This study aimed to characterize and quantify reasons for the removal of nurse sows and identify the removal associated with their extended lactation length (ELL). A total of 100,756 removed nurse sows within a period of 2016–2022 from 53 sow herds in the [...] Read more.
This study aimed to characterize and quantify reasons for the removal of nurse sows and identify the removal associated with their extended lactation length (ELL). A total of 100,756 removed nurse sows within a period of 2016–2022 from 53 sow herds in the Midwest USA were analyzed. Reproductive failure was the most common removal reason (χ2 = 8748.421, p < 0.001) affecting P1, P2, and P3 nurse sows. Failure to conceive and absence of estrus were the main causes of reproductive failure (χ2 = 352.480, p < 0.001) affecting P1 and P2 nurse sows and P1 and P5 nurse sows, respectively. When P2 and P6 nurse sows had an ELL of 0–7 d, they faced a high chance (χ2 = 13.312, p = 0.021) of removal due to conception failure and failure to return to heat, respectively. When P2 and P5 nurse sows had an ELL of 8–14 d, they were highly vulnerable (χ2 = 59.847, p < 0.001) to removal due to failure to conceive and showing heat, respectively. Finally, when ELL was at 15–21 days, P4 and P5 nurse sows were more likely (χ2 = 41.751, p < 0.001) to be removed due to failure to express heat, whereas at the same time, P2 and P3 nurse sows experienced the same removal threat due to failing to conceive. These results could help producers manage nurse sow systems. Full article
(This article belongs to the Section Pigs)
19 pages, 880 KiB  
Article
Digital Technology as a Disentangling Force for Women Entrepreneurs
by Aidin Salamzadeh, Léo-Paul Dana, Javad Ghaffari Feyzabadi, Morteza Hadizadeh and Haleh Eslahi Fatmesari
World 2024, 5(2), 346-364; https://doi.org/10.3390/world5020019 (registering DOI) - 29 May 2024
Abstract
This study investigates the empowering potential of digital technologies for women entrepreneurs, a transformative force that transcends all fields of knowledge. It specifically examines how technology can equip women to overcome socio-cultural and economic barriers, focusing on the case of Iran. The research [...] Read more.
This study investigates the empowering potential of digital technologies for women entrepreneurs, a transformative force that transcends all fields of knowledge. It specifically examines how technology can equip women to overcome socio-cultural and economic barriers, focusing on the case of Iran. The research employs a mixed-methods approach, utilizing a literature review within the qualitative framework to identify key empowerment drivers. Subsequently, a quantitative approach leverages DEMATEL to pinpoint the most impactful drivers. This investigation aims to provide stakeholders with actionable insights, highlighting the critical role of technology in fostering equitable and sustainable economic advancement for women entrepreneurs. Furthermore, the study emphasizes the importance of gathering information from a developing nation like Iran, as its findings can hold significant implications for other countries experiencing similar developmental stages. Ultimately, the research seeks to inform the creation of effective policies, support initiatives, and educational programs. These interventions aim to empower women entrepreneurs to leverage digital tools for sustainable business growth, ultimately contributing to a more equitable and environmentally conscious future. Full article
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20 pages, 7063 KiB  
Article
Influence of Extrusion Screw Speed and CNT Concentration on the Mechanical and EMI Properties of PC/ABS Based Nanocomposites
by Caolan Jameson, Declan M. Devine, Gavin Keane and Noel M. Gately
Materials 2024, 17(11), 2625; https://doi.org/10.3390/ma17112625 (registering DOI) - 29 May 2024
Abstract
This study investigates the effect of extrusion screw speed and carbon nanotube (CNT) concentration on the thermal, mechanical, and electromagnetic interference shielding effectiveness (EMI SE) properties of Polycarbonate (PC)/acrylonitrile-butadiene-styrene (ABS) and its polymer nanocomposites (PNCs) by means of design of experiments (DoE) approach. [...] Read more.
This study investigates the effect of extrusion screw speed and carbon nanotube (CNT) concentration on the thermal, mechanical, and electromagnetic interference shielding effectiveness (EMI SE) properties of Polycarbonate (PC)/acrylonitrile-butadiene-styrene (ABS) and its polymer nanocomposites (PNCs) by means of design of experiments (DoE) approach. A masterbatch method was employed to obtain the best dispersion of the CNTs throughout the polymer matrix. This study evaluates the thermo-mechanical characterisation of the polymers and PNCs at varying screw speeds to assess filler matrix bonding. The results highlight that CNT concentration has a significant effect on all mechanical properties, while screw speed only affects the Charpy impact strength and flexural properties of the samples. Compounding at 200 rpm has the best flexural and tensile strength, which is attributed to the best filler matrix bonding (highest storage modulus) of the PNCs. The best EMI SE results were obtained at 10 wt.% CNTs. This research contributes valuable insights into the effect of CNT concentration and extrusion screw speed on the mechanical, thermal and EMI SE properties of PC/ABS and its PNCs. Full article
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17 pages, 4798 KiB  
Article
Research on the Outburst–Rockburst Coupling Disaster Law Based on True Triaxial Unloading Tests
by Lei Shan, Fukun Xiao, Gang Liu and Kai Xie
Appl. Sci. 2024, 14(11), 4675; https://doi.org/10.3390/app14114675 (registering DOI) - 29 May 2024
Abstract
The coal and gas outburst and rockburst coupling disaster is becoming increasingly serious due to deep mining. To clarify the mechanism inducing the outburst–rockburst coupling disaster, a true triaxial single-sided unloading mechanical test was conducted with the aid of a true triaxial solid–thermal–gas [...] Read more.
The coal and gas outburst and rockburst coupling disaster is becoming increasingly serious due to deep mining. To clarify the mechanism inducing the outburst–rockburst coupling disaster, a true triaxial single-sided unloading mechanical test was conducted with the aid of a true triaxial solid–thermal–gas coupling test device, an industrial computed tomography (CT) system, and an acoustic emission system. Through this test, the mechanical characteristics, meso crushing characteristics, and acoustic characteristics in the disaster formation process were obtained. Additionally, the outburst–rockburst coupling instability disaster law was verified by numerical simulation. The results demonstrated that the stress unloading degree of the coal body was negatively correlated with the initial gas pressure in the outburst–rockburst coupling disaster. The time domain parameter count and energy of acoustic emission exhibited a “bimodal” distribution pattern in the instability stage. The rockburst would occur when the peak value was in a “low-count and high-energy” state, while coal and gas outburst would occur when the peak value was in a “high-count and low-energy” state. The meso slice revealed that gas degradation promoted the development of microcracks in the coal body, and the penetration of cracks resulted in the main cracks of structural instability during rockburst. The coal and gas outburst was mainly attributed to the “cross” shear failure pattern of the coal body. These research findings may lay a foundation for the effective prevention and control of outburst–rockburst coupling disasters. Full article
(This article belongs to the Special Issue Mechanics, Damage Properties and Impacts of Coal Mining)
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13 pages, 1900 KiB  
Article
Seismic Performance of Moment-Resisting–Eccentrically Braced Dual Frame Equipped with Detachable Links
by Roberto Tartaglia, Mario D’Aniello, Giuseppe Maddaloni and Raffaele Landolfo
Appl. Sci. 2024, 14(11), 4676; https://doi.org/10.3390/app14114676 (registering DOI) - 29 May 2024
Abstract
Moment-resisting frames (MRFs) and eccentrically braced frames (EBFs) can be effectively combined in multi-story steel buildings. In fact, MRFs provide redundancy and ductility, while EBFs provide initial and post-yield stiffness with high energy dissipation capacity. In addition, if detachable links are designed as [...] Read more.
Moment-resisting frames (MRFs) and eccentrically braced frames (EBFs) can be effectively combined in multi-story steel buildings. In fact, MRFs provide redundancy and ductility, while EBFs provide initial and post-yield stiffness with high energy dissipation capacity. In addition, if detachable links are designed as dissipative fuses, it is possible to activate their almost contemporary yielding and prevent the collapse of structures during severe earthquakes, ensuring easy repair and rehabilitation measures. The seismic responses of dual frames with MRFs and EBFs are investigated by means of pushover analyses. Different buildings were designed, varying the number of floors (two, four, and eight stories), the number of MRF spans (zero, one, and two), and the length of the short links (0.8 Mp/Vp and 1.6 Mp/Vp). The obtained results confirmed the superior behavior of dual frames with respect to simple EBFs. In addition, it was observed that the frames with the shorter links exhibited higher resistance and rigidity but smaller overall displacement capacity because of the anticipated failure of the links. Full article
(This article belongs to the Special Issue Performance-Based Seismic Design)
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12 pages, 243 KiB  
Article
HOMA-IR Index and Pediatric Psoriasis Severity—A Retrospective Observational Study
by Adelina Maria Sendrea, Denis Iorga, Mihai Dascalu, Alina Suru and Carmen Maria Salavastru
Life 2024, 14(6), 700; https://doi.org/10.3390/life14060700 (registering DOI) - 29 May 2024
Abstract
Psoriasis is a chronic inflammatory disease with specific cutaneous and nail lesions. Recent data has emphasized its systemic nature, highlighting metabolic conditions found in patients. Insulin resistance was identified in adult psoriasis, sometimes related to psoriasis severity. Data regarding this relationship in children [...] Read more.
Psoriasis is a chronic inflammatory disease with specific cutaneous and nail lesions. Recent data has emphasized its systemic nature, highlighting metabolic conditions found in patients. Insulin resistance was identified in adult psoriasis, sometimes related to psoriasis severity. Data regarding this relationship in children are limited. Consequently, we tested the association between the Homeostatic Model Assessment for Insulin Resistance (HOMA-IR) and Psoriasis Area and Severity Index (PASI) using a retrospective dataset of 43 children with various types of psoriasis. First, we attempted to replicate the relationship between the HOMA-IR and PASI. Second, we explored potential associations between these variables and others in the dataset. The results illustrated no association between HOMA-IR and PASI (p-value = 0.512). The exploratory findings hinted at a connection between nail pitting and insulin resistance (p-value = 0.038), yet Bonferroni adjustments suggested the risk of a false-positive finding. Noteworthy associations were found between the HOMA-IR and body mass index (BMI) (p-value = 0.001), the PASI and quality of life impairment (p-value = 0.005), and psoriasis severity and type (p-value = 0.001). The null hypothesis that insulin resistance in children is not positively associated with psoriasis severity cannot be rejected. Pilot estimates of variables and covariates of interest are provided for further confirmatory studies assessing this hypothesis. Full article
24 pages, 803 KiB  
Review
Zebrafish Congenital Heart Disease Models: Opportunities and Challenges
by Dixuan Yang, Zhenjie Jian, Changfa Tang, Zhanglin Chen, Zuoqiong Zhou, Lan Zheng and Xiyang Peng
Int. J. Mol. Sci. 2024, 25(11), 5943; https://doi.org/10.3390/ijms25115943 (registering DOI) - 29 May 2024
Abstract
Congenital heart defects (CHDs) are common human birth defects. Genetic mutations potentially cause the exhibition of various pathological phenotypes associated with CHDs, occurring alone or as part of certain syndromes. Zebrafish, a model organism with a strong molecular conservation similar to humans, is [...] Read more.
Congenital heart defects (CHDs) are common human birth defects. Genetic mutations potentially cause the exhibition of various pathological phenotypes associated with CHDs, occurring alone or as part of certain syndromes. Zebrafish, a model organism with a strong molecular conservation similar to humans, is commonly used in studies on cardiovascular diseases owing to its advantageous features, such as a similarity to human electrophysiology, transparent embryos and larvae for observation, and suitability for forward and reverse genetics technology, to create various economical and easily controlled zebrafish CHD models. In this review, we outline the pros and cons of zebrafish CHD models created by genetic mutations associated with single defects and syndromes and the underlying pathogenic mechanism of CHDs discovered in these models. The challenges of zebrafish CHD models generated through gene editing are also discussed, since the cardiac phenotypes resulting from a single-candidate pathological gene mutation in zebrafish might not mirror the corresponding human phenotypes. The comprehensive review of these zebrafish CHD models will facilitate the understanding of the pathogenic mechanisms of CHDs and offer new opportunities for their treatments and intervention strategies. Full article
(This article belongs to the Special Issue Zebrafish: A Model Organism for Human Health and Disease)
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18 pages, 5010 KiB  
Article
Enhancing Subsurface Phytoplankton Layer Detection in LiDAR Data through Supervised Machine Learning Techniques
by Chunyi Zhong, Peng Chen and Siqi Zhang
Remote Sens. 2024, 16(11), 1953; https://doi.org/10.3390/rs16111953 (registering DOI) - 29 May 2024
Abstract
Phytoplankton are the foundation of marine ecosystems and play a crucial role in determining the optical properties of seawater, which are critical for remote sensing applications. However, passive remote sensing techniques are limited to obtaining data from the near surface, and cannot provide [...] Read more.
Phytoplankton are the foundation of marine ecosystems and play a crucial role in determining the optical properties of seawater, which are critical for remote sensing applications. However, passive remote sensing techniques are limited to obtaining data from the near surface, and cannot provide information on the vertical distribution of the subsurface phytoplankton. In contrast, active LiDAR technology can provide detailed profiles of the subsurface phytoplankton layer (SPL). Nevertheless, the large amount of data generated by LiDAR brought a challenge, as traditional methods for SPL detection often require manual inspection. In this study, we investigated the application of supervised machine learning algorithms for the automatic recognition of SPL, with the aim of reducing the workload of manual detection. We evaluated five machine learning models—support vector machine (SVM), linear discriminant analysis (LDA), a neural network, decision trees, and RUSBoost—and measured their performance using metrics such as precision, recall, and F3 score. The study results suggest that RUSBoost outperforms the other algorithms, consistently achieving the highest F3 score in most of the test cases, with the neural network coming in second. To improve accuracy, RUSBoost is preferred, while the neural network is more advantageous due to its faster processing time. Additionally, we explored the spatial patterns and diurnal fluctuations of SPL captured by LiDAR. This study revealed a more pronounced presence of SPL at night during this experiment, thereby demonstrating the efficacy of LiDAR technology in the monitoring of the daily dynamics of subsurface phytoplankton layers. Full article
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28 pages, 12497 KiB  
Review
Atomic Force Microscopy for the Study of Cell Mechanics in Pharmaceutics
by Henrik Siboni, Ivana Ruseska and Andreas Zimmer
Pharmaceutics 2024, 16(6), 733; https://doi.org/10.3390/pharmaceutics16060733 (registering DOI) - 29 May 2024
Abstract
Cell mechanics is gaining attraction in drug screening, but the applicable methods have not yet become part of the standardized norm. This review presents the current state of the art for atomic force microscopy, which is the most widely available method. The field [...] Read more.
Cell mechanics is gaining attraction in drug screening, but the applicable methods have not yet become part of the standardized norm. This review presents the current state of the art for atomic force microscopy, which is the most widely available method. The field is first motivated as a new way of tracking pharmaceutical effects, followed by a basic introduction targeted at pharmacists on how to measure cellular stiffness. The review then moves on to the current state of the knowledge in terms of experimental results and supplementary methods such as fluorescence microscopy that can give relevant additional information. Finally, rheological approaches as well as the theoretical interpretations are presented before ending on additional methods and outlooks. Full article
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13 pages, 1906 KiB  
Article
Evaluation of Spectrum-Aided Visual Enhancer (SAVE) in Esophageal Cancer Detection Using YOLO Frameworks
by Chu-Kuang Chou, Riya Karmakar, Yu-Ming Tsao, Lim Wei Jie, Arvind Mukundan, Chien-Wei Huang, Tsung-Hsien Chen, Chau-Yuan Ko and Hsiang-Chen Wang
Diagnostics 2024, 14(11), 1129; https://doi.org/10.3390/diagnostics14111129 (registering DOI) - 29 May 2024
Abstract
The early detection of esophageal cancer presents a substantial difficulty, which contributes to its status as a primary cause of cancer-related fatalities. This study used You Only Look Once (YOLO) frameworks, specifically YOLOv5 and YOLOv8, to predict and detect early-stage EC by using [...] Read more.
The early detection of esophageal cancer presents a substantial difficulty, which contributes to its status as a primary cause of cancer-related fatalities. This study used You Only Look Once (YOLO) frameworks, specifically YOLOv5 and YOLOv8, to predict and detect early-stage EC by using a dataset sourced from the Division of Gastroenterology and Hepatology, Ditmanson Medical Foundation, Chia-Yi Christian Hospital. The dataset comprised 2741 white-light images (WLI) and 2741 hyperspectral narrowband images (HSI-NBI). They were divided into 60% training, 20% validation, and 20% test sets to facilitate robust detection. The images were produced using a conversion method called the spectrum-aided vision enhancer (SAVE). This algorithm can transform a WLI into an NBI without requiring a spectrometer or spectral head. The main goal was to identify dysplasia and squamous cell carcinoma (SCC). The model’s performance was evaluated using five essential metrics: precision, recall, F1-score, mAP, and the confusion matrix. The experimental results demonstrated that the HSI model exhibited improved learning capabilities for SCC characteristics compared with the original RGB images. Within the YOLO framework, YOLOv5 outperformed YOLOv8, indicating that YOLOv5’s design possessed superior feature-learning skills. The YOLOv5 model, when used in conjunction with HSI-NBI, demonstrated the best performance. It achieved a precision rate of 85.1% (CI95: 83.2–87.0%, p < 0.01) in diagnosing SCC and an F1-score of 52.5% (CI95: 50.1–54.9%, p < 0.01) in detecting dysplasia. The results of these figures were much better than those of YOLOv8. YOLOv8 achieved a precision rate of 81.7% (CI95: 79.6–83.8%, p < 0.01) and an F1-score of 49.4% (CI95: 47.0–51.8%, p < 0.05). The YOLOv5 model with HSI demonstrated greater performance than other models in multiple scenarios. This difference was statistically significant, suggesting that the YOLOv5 model with HSI significantly improved detection capabilities. Full article
(This article belongs to the Special Issue Advancements in Diagnosis and Prognosis of Gastrointestinal Diseases)
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30 pages, 416 KiB  
Article
Automating the Short-Loading Cycle: Survey and Integration Framework
by Carl Borngrund, Ulf Bodin, Henrik Andreasson and Fredrik Sandin
Appl. Sci. 2024, 14(11), 4674; https://doi.org/10.3390/app14114674 (registering DOI) - 29 May 2024
Abstract
The short-loading cycle is a construction task where a wheel loader scoops material from a nearby pile in order to move that material to the tipping body of a dump truck. The short-loading cycle is a vital task performed in high quantities and [...] Read more.
The short-loading cycle is a construction task where a wheel loader scoops material from a nearby pile in order to move that material to the tipping body of a dump truck. The short-loading cycle is a vital task performed in high quantities and is often part of a more extensive never-ending process to move material for further refinement. This, together with the highly repetitive nature of the short-loading cycle, makes it a suitable candidate for automation. However, the short-loading cycle is a complex task where the mechanics of the wheel loader together with the interaction between the wheel loader and the environment needs to be considered. This must be achieved while maintaining some productivity goal and, concurrently, minimizing the used energy. The main objective of this work is to analyze the short-loading cycle, assess the current state of research in this field, and discuss the steps required to progress towards a minimal viable product consisting of individual automation solutions that can perform the short-loading cycle well enough to be used by early adopters. This is achieved through a comprehensive literature study and consequent analysis of the review results. From this analysis, the requirements of an MVP are defined and some gaps which are currently hindering the realization of the MVP are presented. Full article
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20 pages, 8590 KiB  
Article
A Lombard Variety of Sweet Pepper Regulating Senescence and Proliferation: The Voghera Pepper
by Fabrizio De Luca, Federica Gola, Alberto Azzalin, Claudio Casali, Ludovica Gaiaschi, Gloria Milanesi, Riccardo Vicini, Paola Rossi and Maria Grazia Bottone
Nutrients 2024, 16(11), 1681; https://doi.org/10.3390/nu16111681 (registering DOI) - 29 May 2024
Abstract
Aging and its related disorders are important issues nowadays and the first cause of this physio-pathological condition is the overproduction of ROS. Ascorbic acid is an antioxidant mediator and its anti-aging proprieties are well known. Our previous data demonstrated that Voghera sweet pepper [...] Read more.
Aging and its related disorders are important issues nowadays and the first cause of this physio-pathological condition is the overproduction of ROS. Ascorbic acid is an antioxidant mediator and its anti-aging proprieties are well known. Our previous data demonstrated that Voghera sweet pepper (VP), a distinctive type of pepper cultivated in Italy, is particularly rich in ascorbic acid. Based on these data, the anti-aging effect mediated by extracts of the edible part of VP was evaluated on an in vitro model of both young and old Normal Human Diploid Fibroblasts (NHDF). Using phase contrast microscopy, we observed that VP may help cells in the maintenance of physiological morphology during aging. Cytofluorimetric analyses revealed that VP extracts led to an increase in DNA synthesis and percentage of living cells, linked to a consequent increase in mitotic events. This hypothesis is supported by the enhancement of PCNA expression levels observed in old, treated fibroblasts, corroborating the idea that this extract could recover a young phenotype in adult fibroblasts, confirmed by the study of p16 and p53 expression levels and TEM analyses. Based on these results, we may suppose that VP can lead to the partial recovery of “young-like” phenotypes in old fibroblasts. Full article
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12 pages, 900 KiB  
Review
Epigenetics in Glaucoma
by Fabiana D’Esposito, Caterina Gagliano, Philip Anthony Bloom, Maria Francesca Cordeiro, Alessandro Avitabile, Giuseppe Gagliano, Ciro Costagliola, Teresio Avitabile, Mutali Musa and Marco Zeppieri
Medicina 2024, 60(6), 905; https://doi.org/10.3390/medicina60060905 (registering DOI) - 29 May 2024
Abstract
Primary open angle glaucoma (POAG) is defined as a “genetically complex trait”, where modifying factors act on a genetic predisposing background. For the majority of glaucomatous conditions, DNA variants are not sufficient to explain pathogenesis. Some genes are clearly underlying the more “Mendelian” [...] Read more.
Primary open angle glaucoma (POAG) is defined as a “genetically complex trait”, where modifying factors act on a genetic predisposing background. For the majority of glaucomatous conditions, DNA variants are not sufficient to explain pathogenesis. Some genes are clearly underlying the more “Mendelian” forms, while a growing number of related polymorphisms in other genes have been identified in recent years. Environmental, dietary, or biological factors are known to influence the development of the condition, but interactions between these factors and the genetic background are poorly understood. Several studies conducted in recent years have led to evidence that epigenetics, that is, changes in the pattern of gene expression without any changes in the DNA sequence, appear to be the missing link. Different epigenetic mechanisms have been proven to lead to glaucomatous changes in the eye, principally DNA methylation, post-translational histone modification, and RNA-associated gene regulation by non-coding RNAs. The aim of this work is to define the principal epigenetic actors in glaucoma pathogenesis. The identification of such mechanisms could potentially lead to new perspectives on therapeutic strategies. Full article
(This article belongs to the Section Ophthalmology)
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24 pages, 3899 KiB  
Article
Utility of Water-Based Databases for Underground Water Management: Legal and System Perspective
by Anna Klimach and Elżbieta Zębek
Sustainability 2024, 16(11), 4608; https://doi.org/10.3390/su16114608 (registering DOI) - 29 May 2024
Abstract
Groundwater is a strategic environmental resource due to its use to human consumption, and therefore requires special protection and monitoring in many databases. In Poland, groundwater data are included in different typical water-related databases such as Hydroportal, Portal of the State Hydrogeological Service [...] Read more.
Groundwater is a strategic environmental resource due to its use to human consumption, and therefore requires special protection and monitoring in many databases. In Poland, groundwater data are included in different typical water-related databases such as Hydroportal, Portal of the State Hydrogeological Service and Portal of the Central Geological Database, which is linked to an integrated real estate information system (IREIS). This article aims to demonstrate how IREIS is used to manage groundwater in Poland. The analysis indicates that shortcomings and gaps are noticeable, e.g., duplication of data and significant lack of data necessary for the implementation of the legal instruments. It is therefore a priority to establish a harmonised permitting and sustainable management of resources by public authorities, supported by an appropriate information and resource system for the EU. There is a need for an increase in the amount of information in databases and a reduction in the number of databases with groundwater information. The results of the analysis of these information systems can provide guidance to other EU countries for more effective groundwater protection and management. Full article
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