The 2023 MDPI Annual Report has
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13 pages, 4163 KiB  
Article
Improved Durability of Wood Strand-Based Panels Using Guayule
by Edward D. Entsminger, Mostafa Mohammadabadi, C. Elizabeth Stokes and Suman Pradhan
Appl. Sci. 2024, 14(11), 4535; https://doi.org/10.3390/app14114535 (registering DOI) - 25 May 2024
Abstract
In this study, the most effective application method of guayule resin and its effects on termite and fungal decay biological performances of wood strand-based (WSB) panels were explored. Southern yellow pine (Pinus spp. L.) wood strands were mixed with phenol formaldehyde (PF) [...] Read more.
In this study, the most effective application method of guayule resin and its effects on termite and fungal decay biological performances of wood strand-based (WSB) panels were explored. Southern yellow pine (Pinus spp. L.) wood strands were mixed with phenol formaldehyde (PF) resin to a target resin content of 5.00% and hot-pressed to manufacture the control WSB panels. For the in-situ process, a guayule resin solution was prepared and sprayed on the wood strands immediately after spraying the PF resin to a target content of 5.00%. For brushing and spraying methods, a sub-set of the control panel specimens were further brushed or sprayed with guayule resin solution on all surfaces. To understand the effects of guayule on durability, specimens cut from control and treated panels were subjected to termite resistance and fungal degradation soil block tests. The in-situ specimens with 5.00% guayule were subjected to tensile, internal bond, water absorption, and thickness swelling tests to find out whether guayule affects the mechanical performance of WSB panels. The results showed that in-situ treatment resulted in a significant reduction in the mechanical properties of wood stand-based panels. The sprayed technique resulted in more durable panels, as the mass loss was 2.21% for termites and 3.24% for fungi specimens, which decreased by 76.66% and 80.86%, respectively, when compared to the WSB controls. Full article
(This article belongs to the Special Issue Advanced Composites and Hybrid Materials)
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18 pages, 5064 KiB  
Article
Global Semantic-Sense Aggregation Network for Salient Object Detection in Remote Sensing Images
by Hongli Li, Xuhui Chen, Wei Yang, Jian Huang, Kaimin Sun, Ying Wang, Andong Huang and Liye Mei
Entropy 2024, 26(6), 445; https://doi.org/10.3390/e26060445 (registering DOI) - 25 May 2024
Abstract
Salient object detection (SOD) aims to accurately identify significant geographical objects in remote sensing images (RSI), providing reliable support and guidance for extensive geographical information analyses and decisions. However, SOD in RSI faces numerous challenges, including shadow interference, inter-class feature confusion, as well [...] Read more.
Salient object detection (SOD) aims to accurately identify significant geographical objects in remote sensing images (RSI), providing reliable support and guidance for extensive geographical information analyses and decisions. However, SOD in RSI faces numerous challenges, including shadow interference, inter-class feature confusion, as well as unclear target edge contours. Therefore, we designed an effective Global Semantic-aware Aggregation Network (GSANet) to aggregate salient information in RSI. GSANet computes the information entropy of different regions, prioritizing areas with high information entropy as potential target regions, thereby achieving precise localization and semantic understanding of salient objects in remote sensing imagery. Specifically, we proposed a Semantic Detail Embedding Module (SDEM), which explores the potential connections among multi-level features, adaptively fusing shallow texture details with deep semantic features, efficiently aggregating the information entropy of salient regions, enhancing information content of salient targets. Additionally, we proposed a Semantic Perception Fusion Module (SPFM) to analyze map relationships between contextual information and local details, enhancing the perceptual capability for salient objects while suppressing irrelevant information entropy, thereby addressing the semantic dilution issue of salient objects during the up-sampling process. The experimental results on two publicly available datasets, ORSSD and EORSSD, demonstrated the outstanding performance of our method. The method achieved 93.91% Sα, 98.36% Eξ, and 89.37% Fβ on the EORSSD dataset. Full article
(This article belongs to the Section Multidisciplinary Applications)
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16 pages, 14962 KiB  
Article
Genesis and Related Reservoir Development Model of Ordovician Dolomite in Shuntogol Area, Tarim Basin
by Liangxuanzi Zhong, Leli Cheng, Heng Fu, Shaoze Zhao, Xiaobin Ye, Yidong Ding and Yin Senlin
Minerals 2024, 14(6), 545; https://doi.org/10.3390/min14060545 (registering DOI) - 25 May 2024
Abstract
The Ordovician thick dolostone in Shuntogol area of the Tarim Basin has the potential to form a large-scale reservoir, but its genesis and reservoir development model are still unclear. Starting from a sedimentary sequence, this study takes a batch of dolostone samples obtained [...] Read more.
The Ordovician thick dolostone in Shuntogol area of the Tarim Basin has the potential to form a large-scale reservoir, but its genesis and reservoir development model are still unclear. Starting from a sedimentary sequence, this study takes a batch of dolostone samples obtained from new drilling cores in recent years as the research object. On the basis of core observation and thin section identification, trace elements, cathodoluminescence, carbon and oxygen isotopes, rare earth elements, and X-ray diffraction order degree tests were carried out to discuss the origin of the dolomite and summarize the development model of the dolostone reservoir. The analysis results show that the Ordovician dolomite in the study area had a good crystalline shape, large thickness, high Fe and Mn values, and mostly showed bright red light or bright orange–red light under cathode rays. The ratio of δ18O values to seawater values at the same time showed a negative bias; the δCe values were negative anomalies, the δEu values were positive anomalies, and the order degree was high. This indicates that the dolomitization process occurred in a relatively closed diagenetic environment. The Ordovician carbonate rocks in the study area were low-lying during the sedimentary period, and with the rise of sea level, the open platform facies continued to develop. When the Middle and Lower Ordovician series entered the burial stage, the main hydrocarbon source rocks of the lower Cambrian Series entered the oil generation peak, and the resulting formation overpressure provided the dynamic source for the upward migration of the lower magnesium-rich fluid, and the dolomitization fluid entered the karst pore system in the target layer to produce all the dolomitization. This set of dolostone reservoirs is large in scale and can be used as a favorable substitute area for deep carbonate exploration for continuous study. Full article
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36 pages, 1563 KiB  
Review
Application of Natural Edible Coating to Enhance the Shelf Life of Red Fruits and Their Bioactive Content
by Michele Pellegrino, Jasper Okoro Godwin Elechi, Pierluigi Plastina and Monica Rosa Loizzo
Appl. Sci. 2024, 14(11), 4552; https://doi.org/10.3390/app14114552 (registering DOI) - 25 May 2024
Abstract
Red fruits contain bioactive substances including phenolic acids and flavonoids, which provide many health advantages for the human body. Industries find them intriguing because of their color and their ability to prevent chronic ailments such as metabolic, degenerative, and cardiovascular disorders. Nevertheless, the [...] Read more.
Red fruits contain bioactive substances including phenolic acids and flavonoids, which provide many health advantages for the human body. Industries find them intriguing because of their color and their ability to prevent chronic ailments such as metabolic, degenerative, and cardiovascular disorders. Nevertheless, the resilience of these organic molecules is influenced by several environmental, physical, and chemical phenomena. Therefore, the beneficial health properties of red fruits may diminish during postharvest processing. In this scenario, many postharvest methods have been implemented to enhance the shelf life and preserve the bioactive components of red fruits. The objectives of this review were to provide a comprehensive assessment of the health benefits of red fruits, and to explore the possibilities of edible coatings in retaining their freshness and protecting their bioactive contents. Co-occurrence networks were built using VOSviewer software to produce a two-dimensional map based on term frequency, and the examination of the 1364 keywords obtained from the scientific papers revealed the presence of at least 71 co-occurrences that provide insight into many natural components used in edible coatings for red fruits, such as proteins, polysaccharides, lipids, phospholipids, and minerals. The review examined their composition, functioning, application techniques, limits, safety considerations, legal regulations, and potential future developments. This review has shown that an edible coating may act as a protective layer on the surface of the fruit, alter the interior gas composition, reduce water loss, and postpone fruit ripening, thereby enhancing the health-promoting properties. Full article
(This article belongs to the Special Issue Antioxidant Compounds in Food Processing)
13 pages, 1944 KiB  
Article
Development of a Biosafety Level 1 Cellular Assay for Identifying Small-Molecule Antivirals Targeting the Main Protease of SARS-CoV-2: Evaluation of Cellular Activity of GC376, Boceprevir, Carmofur, Ebselen, and Selenoneine
by Yasunori Fukumoto, Noriyuki Suzuki, Reina Hara, Yu-ki Tanaka and Yasumitsu Ogra
Int. J. Mol. Sci. 2024, 25(11), 5767; https://doi.org/10.3390/ijms25115767 (registering DOI) - 25 May 2024
Abstract
While research has identified several inhibitors of the main protease (Mpro) of SARS-CoV-2, a significant portion of these compounds exhibit reduced activity in the presence of reducing agents, raising concerns about their effectiveness in vivo. Furthermore, the conventional biosafety level 3 (BSL-3) for [...] Read more.
While research has identified several inhibitors of the main protease (Mpro) of SARS-CoV-2, a significant portion of these compounds exhibit reduced activity in the presence of reducing agents, raising concerns about their effectiveness in vivo. Furthermore, the conventional biosafety level 3 (BSL-3) for cellular assays using viral particles poses a limitation for the widespread evaluation of Mpro inhibitor efficacy in a cell-based assay. Here, we established a BSL-1 compatible cellular assay to evaluate the in vivo potential of Mpro inhibitors. This assay utilizes mammalian cells expressing a tagged Mpro construct containing N-terminal glutathione S-transferase (GST) and C-terminal hemagglutinin (HA) tags and monitors Mpro autodigestion. Using this method, GC376 and boceprevir effectively inhibited Mpro autodigestion, suggesting their potential in vivo activity. Conversely, carmofur and ebselen did not exhibit significant inhibitory effects in this assay. We further investigated the inhibitory potential of selenoneine on Mpro using this approach. Computational analyses of binding energies suggest that noncovalent interactions play a critical role in facilitating the covalent modification of the C145 residue, leading to Mpro inhibition. Our method is straightforward, cost-effective, and readily applicable in standard laboratories, making it accessible to researchers with varying levels of expertise in infectious diseases. Full article
(This article belongs to the Special Issue COVID-19: Advances in Pathophysiology and Therapeutics)
13 pages, 3221 KiB  
Article
Adenosine 5′-Monophosphate-to-Threonine Ratio Promotes Abdominal Aortic Aneurysms via Up-Regulation of HLA-DR on Natural Killer Cells: A Bidirectional Mendelian Randomized Analysis
by Fei Teng, Youyin Tang, Zhangyu Lu, Zheyu Chen and Qiang Guo
Biomedicines 2024, 12(6), 1179; https://doi.org/10.3390/biomedicines12061179 (registering DOI) - 25 May 2024
Abstract
Abstract: Objective: Immune–metabolic interactions may have causal and therapeutic impacts on abdominal aortic aneurysms (AAAs). However, due to the lack of research on the relationship between immune–metabolic interactions and AAAs, further exploration of the mechanism faces challenges. Methods: A two-sample, [...] Read more.
Abstract: Objective: Immune–metabolic interactions may have causal and therapeutic impacts on abdominal aortic aneurysms (AAAs). However, due to the lack of research on the relationship between immune–metabolic interactions and AAAs, further exploration of the mechanism faces challenges. Methods: A two-sample, two-step mediation analysis with Mendelian randomization (MR) based on genome-wide association studies (GWASs) was performed to determine the causal associations among blood immune cell signatures, metabolites, and AAAs. The stability, heterogeneity, and pleiotropy of the results were verified using a multivariate sensitivity analysis. Results: After multiple two-sample MRs using the AAA data from two large-scale GWAS databases, we determined that the human leukocyte antigen-DR (HLA-DR) levels on HLA-DR + natural killer (NK) cells (HLA-DR/NK) were associated with the causal effect of an AAA, with consistent results in the two databases (FinnGen: odds ratio (OR) = 1.054, 95% confidence interval (CI): 1.003–1.067, p-value = 0.036; UK Biobank: OR = 1.149, 95% CI: 1.046–1.261, p-value = 0.004). The metabolites associated with the risk of developing an AAA were enriched to find a specific metabolic model. We also found that the ratio of adenosine 5′-monophosphate (AMP) to threonine could act as a potential mediator between the HLA/NK and an AAA, with a direct effect (beta effect = 0.0496) and an indirect effect (beta effect = 0.0029). The mediation proportion was 5.56%. Conclusions: Our study found that an up-regulation of HLA-DR on HLA-DR/NK cells can increase the risk of an AAA via improvements in the AMP-to-threonine ratio, thus providing a potential new biomarker for the prediction and treatment of AAAs. Full article
(This article belongs to the Section Gene and Cell Therapy)
17 pages, 497 KiB  
Article
Comprehensive Screening of Salinomycin in Feed and Its Residues in Poultry Tissues Using Microbial Inhibition Tests Coupled to Enzyme-Linked Immunosorbent Assay (ELISA)
by Daniela Spišáková, Ivona Kožárová, Simona Hriciková and Slavomír Marcinčák
Foods 2024, 13(11), 1661; https://doi.org/10.3390/foods13111661 (registering DOI) - 25 May 2024
Abstract
Salinomycin is a coccidiostat approved as a feed additive for the prevention of coccidiosis in poultry. Official control of its residues is set by the Commission Delegated Regulation (EU) 2022/1644. The aim of our study was to assess the suitability of three microbial [...] Read more.
Salinomycin is a coccidiostat approved as a feed additive for the prevention of coccidiosis in poultry. Official control of its residues is set by the Commission Delegated Regulation (EU) 2022/1644. The aim of our study was to assess the suitability of three microbial inhibition tests (MITs), Premi®Test, Explorer 2.0, and the Screening Test for Antibiotic Residues (STAR) linked to the enzyme-linked immunosorbent assay (ELISA), for the screening of salinomycin residues in the tissues of broiler chickens (breast and thigh muscle, heart, liver, gizzard, kidneys, lungs, spleen, skin, and fat) fed commercially produced feed containing 70 mg.kg−1 of salinomycin in the complete feed. The first residue screening (Sampling A) was performed on the last day of administration of the salinomycin-medicated feed (day 30), and the second screening (Sampling B) was performed on the day of slaughter (day 37) after the expiry of the withdrawal period with the feeding of non-medicated feed. Based on the quantitative confirmation of salinomycin residues in the examined chicken tissues by the ELISA method (Sampling A from 0.025 to 0.241 mg kg−1; Sampling B from 0.003 to 0.076 mg kg−1), all the MITs with the preference of the bacterial strain Bacillus stearothermophilus var. calidolactis ATCC 10149 demonstrated the ability to detect the residues of salinomycin in the examined tissues of broiler chickens at the level of maximum residue limits set from 0.15 to 0.150 mg kg−1 by the Commission Implementing Regulation (EU) 2017/1914 and confirmed the relevancy of their sensitivity to coccidiostat salinomycin. Full article
(This article belongs to the Section Food Analytical Methods)
20 pages, 3774 KiB  
Article
Progress on the Use of Hydroponics to Remediate Hog Farm Wastewater after Vermifiltration Treatment
by Kirill Ispolnov, Tomás M. R. Luz, Luis M. I. Aires and Judite S. Vieira
Water 2024, 16(11), 1524; https://doi.org/10.3390/w16111524 (registering DOI) - 25 May 2024
Abstract
Hog farm wastewater may require novel biological treatment techniques to improve efficiency and reduce costs. Previous studies combining vermifiltration with downstream hydroponics showed the need for a balanced wastewater nutrient content, particularly the nitrogen-to-phosphorus ratio. Here, a deep-water culture hydroponic system, growing lettuce [...] Read more.
Hog farm wastewater may require novel biological treatment techniques to improve efficiency and reduce costs. Previous studies combining vermifiltration with downstream hydroponics showed the need for a balanced wastewater nutrient content, particularly the nitrogen-to-phosphorus ratio. Here, a deep-water culture hydroponic system, growing lettuce as model culture, was used to remediate hog farm wastewater after an initial vermifiltration stage, aiming to produce an effluent suitable for irrigation. Supplemented vermifiltered wastewater (SVW) with added nutrients was tested against unsupplemented vermifiltered wastewater (VW) over 35 days, using a synthetic nutrient solution (NS) as a control. Supplementation was shown to improve lettuce growth, light use efficiency, and water use efficiency. Nutrient analysis over time showed a better-balanced phosphorus and nitrogen removal in SVW than in VW; in all treatments nitrogen and phosphorus content was reduced to legally acceptable levels for treated wastewater reuse in irrigation: nitrate 5 mgN L−1 in VW and undetectable in SVW and NS; ammonia undetectable in all treatments; and total phosphorus 2.4 mg L−1 in SVW, 0.9 mg L−1 in NS and undetectable in VW. Coliforms increased in VW and SVW during hydroponic treatment, which should be solved by disinfection. Overall, combining vermifiltration with downstream hydroponic culture proved to be a promising treatment to remediate nutrients in hog farm effluent to make it suitable to be reused for irrigation. Full article
(This article belongs to the Section Wastewater Treatment and Reuse)
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19 pages, 2487 KiB  
Review
Therapeutic Relevance of Inducing Autophagy in β-Thalassemia
by Roberto Gambari and Alessia Finotti
Cells 2024, 13(11), 918; https://doi.org/10.3390/cells13110918 (registering DOI) - 25 May 2024
Abstract
The β-thalassemias are inherited genetic disorders affecting the hematopoietic system. In β-thalassemias, more than 350 mutations of the adult β-globin gene cause the low or absent production of adult hemoglobin (HbA). A clinical parameter affecting the physiology of erythroid cells is the excess [...] Read more.
The β-thalassemias are inherited genetic disorders affecting the hematopoietic system. In β-thalassemias, more than 350 mutations of the adult β-globin gene cause the low or absent production of adult hemoglobin (HbA). A clinical parameter affecting the physiology of erythroid cells is the excess of free α-globin. Possible experimental strategies for a reduction in excess free α-globin chains in β-thalassemia are CRISPR-Cas9-based genome editing of the β-globin gene, forcing “de novo” HbA production and fetal hemoglobin (HbF) induction. In addition, a reduction in excess free α-globin chains in β-thalassemia can be achieved by induction of the autophagic process. This process is regulated by the Unc-51-like kinase 1 (Ulk1) gene. The interplay with the PI3K/Akt/TOR pathway, with the activity of the α-globin stabilizing protein (AHSP) and the involvement of microRNAs in autophagy and Ulk1 gene expression, is presented and discussed in the context of identifying novel biomarkers and potential therapeutic targets for β-thalassemia. Full article
(This article belongs to the Special Issue Exclusive Review Papers in Autophagy—Second Edition)
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18 pages, 913 KiB  
Article
Effect of Three Semen Extenders on Sperm Quality and In Vitro Fertilization Rates of Fresh and Cryopreserved Sperm Collected from Llama (Lama glama) vas Deferens
by Manuel G. Pérez-Durand, Carlos W. Bustamante, Pedro P. Machaca, Wilber García, Eloy A. Condori, Rassiel Macedo, Eliseo Fernández, Yan P. Manrique, Miguel A. Gutiérrez-Reinoso, Uri H. Perez-Guerra and Manuel García-Herreros
Animals 2024, 14(11), 1573; https://doi.org/10.3390/ani14111573 (registering DOI) - 25 May 2024
Abstract
The advances in Assisted Reproductive Technologies (ARTs) applied in South American camelid species are still scarce. The aim of this study was to compare the effects of three semen extenders, before and after the cryopreservation of spermatozoa obtained from the vas deferens, on [...] Read more.
The advances in Assisted Reproductive Technologies (ARTs) applied in South American camelid species are still scarce. The aim of this study was to compare the effects of three semen extenders, before and after the cryopreservation of spermatozoa obtained from the vas deferens, on sperm quality parameters and in vitro fertilization rates of llama (Lama glama) oocytes. Mature fertile llama males (Lama glama; n = 6; age: 48–60 mo.; BCS: ~2.7) were included in the study. Sperm samples were collected from each male using the surgical technique of the vas deferens deviation. Then, the sperm samples were pooled and diluted with the Tris-EY, Andromed®, or BioxCell® extender in order to subsequently carry out the sperm cryopreservation process. The sperm quality assessment related to each extender was performed before and after cryopreservation with regard to sperm morphological abnormalities, acrosome integrity, sperm viability, membrane permeability, and sperm motility traits. Moreover, in vitro fertilization (IVF) procedures were carried out to evaluate the in vitro fertility of the cryopreserved sperm samples using each extender. Overall, significant differences were observed before and after cryopreservation regarding acrosome integrity, sperm viability, membrane permeability, and sperm motility traits among the extenders used, where Tris-EY and Andromed® were better than BioxCell® (p < 0.05); however, no differences were observed regarding the sperm morphological abnormalities among extenders (p > 0.05). Moreover, multiple differences were observed with regard to the velocity and linearity kinematic parameters obtained by computerized analysis before and after the cryopreservation process, irrespective of the extender used (p < 0.05). Finally, differences were observed regarding the in vitro fertilization rates among the different extender-derived samples (p < 0.05). In conclusion, the sperm quality using Tris-EY and Andromed® was better before and after cryopreservation compared to that using BioxCell®. Although the number of fertilized oocytes obtained after the IVF process between Tris-EY and Andromed® was similar, Andromed®-derived samples showed the best sperm quality results before and after cryopreservation. This indicates that the cryopreservation extender is a determining factor in significantly improving in vitro fertilization rates when using sperm samples obtained from vas deferens in llama (Lama glama) males. Full article
(This article belongs to the Special Issue Animal Reproduction: Semen Quality Assessment, Volume II)
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17 pages, 3994 KiB  
Article
Plant Invasion-Induced Habitat Changes Impact a Bird Community through the Taxonomic Filtering of Habitat Assemblages
by Emilia Grzędzicka
Animals 2024, 14(11), 1574; https://doi.org/10.3390/ani14111574 (registering DOI) - 25 May 2024
Abstract
Describing the spatial distribution of communities is crucial to understanding how environmental disturbance can affect biodiversity. Agricultural lands are susceptible to disturbances of anthropogenic origin and have been identified as ecosystems of conservation concern. Such lands are vulnerable to invasions by anthropogenically introduced [...] Read more.
Describing the spatial distribution of communities is crucial to understanding how environmental disturbance can affect biodiversity. Agricultural lands are susceptible to disturbances of anthropogenic origin and have been identified as ecosystems of conservation concern. Such lands are vulnerable to invasions by anthropogenically introduced non-native plants disturbing habitats. This research focused on the invasion-induced taxonomic filtering of birds with shared habitat requirements. The birds were surveyed along a gradient of invasion-altered areas (far from the invasion, uninvaded although susceptible to invaders, and invaded) to identify changes in bird assemblages (ground/herb dwellers, bush foragers, ecotone birds, and tree foragers) caused by this disturbance. Data were collected from 112 sites sampled in southeastern Poland. There were significantly fewer bird species from each assemblage on invaded sites than on uninvaded sites, although exposed to invasion, despite the decrease in the abundance of only ground/herb dwellers. Beta diversity analysis showed that sites with invasion contained bird communities significantly different from those at other sites. Invasion-induced changes resulted in a significant reduction in the diversity of ground/herb dwellers in comparison with uninvaded sites and created a distinctive bush bird assemblage. This was most likely due to the transformation of the grassland layer and the thickening of the shrub layer by plant invaders, which resemble shrubs in morphology. The results indicated the filtering effect of invasion on bird species composition at the level of two habitat assemblages despite the decreases in bird abundance and species diversity of the whole community. Full article
(This article belongs to the Special Issue Bird Behavior and Diversity in the Anthropocene)
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15 pages, 1753 KiB  
Article
Odour Fingerprints of Black (Tuber mesentericum) and Bianchetto (Tuber borchii) Truffles from Different Areas of the Campania Region
by Andrea Balivo, Enrica De Falco, Luca Branca, Michele Caputo, Raffaele Sacchi and Alessandro Genovese
Horticulturae 2024, 10(6), 557; https://doi.org/10.3390/horticulturae10060557 (registering DOI) - 25 May 2024
Abstract
In this study, E-nose and SPME-GC/MS were applied to compare the odour patterns and volatile compounds of two truffle species harvested in different areas of Campania (Southern Italy). In total, 107 Tuber mesentericum (black truffle) and 60 Tuber borchii (bianchetto truffle) truffles were [...] Read more.
In this study, E-nose and SPME-GC/MS were applied to compare the odour patterns and volatile compounds of two truffle species harvested in different areas of Campania (Southern Italy). In total, 107 Tuber mesentericum (black truffle) and 60 Tuber borchii (bianchetto truffle) truffles were sampled in areas of Avellino, Salerno, Benevento, and Caserta. The E-nose correctly discriminated between Tuber mesentericum and Tuber borchii truffles. The GC/MS analysis revealed qualitative-quantitative differences between Tuber mesentericum and Tuber borchii, with a prevalence of volatile phenols and aromatic compounds for the black truffle, which are responsible for smoky and floral aromas, and ketones, alcohols, aldehydes, and thiophene derivatives for the bianchetto truffle, mostly responsible for earthy mushroom- and garlic-like aromas. The discriminant analysis performed on the E-nose data pattern provided an average correct classification between 55 and 60% for the same species collected in different sites. Tuber borchii truffles were better discriminated based on the harvesting altitude (hilly and coastal areas). GC/MS revealed quantitative differences in the volatile compounds of truffles of the same species collected in different areas, with variations in abundance based on the harvesting site. The distinctive profile of volatile compounds could represent a useful chemical marker to be investigated to authenticate the truffle harvesting area. Full article
(This article belongs to the Section Postharvest Biology, Quality, Safety, and Technology)
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23 pages, 15648 KiB  
Article
Sensitivity Analysis of Modelled Air Pollutant Distribution around Buildings under Different Meteorological Conditions
by Anton Petrov, Emilia Georgieva and Elena Hristova
Atmosphere 2024, 15(6), 638; https://doi.org/10.3390/atmos15060638 (registering DOI) - 25 May 2024
Abstract
The distribution of air pollutants in urban areas is significantly influenced by the presence of various geometric structures, including buildings, bridges, and tunnels. In built-up environments, meteorological conditions may influence the accumulation or dispersion of air pollutants in specific zones. This study examines [...] Read more.
The distribution of air pollutants in urban areas is significantly influenced by the presence of various geometric structures, including buildings, bridges, and tunnels. In built-up environments, meteorological conditions may influence the accumulation or dispersion of air pollutants in specific zones. This study examines the impact of wind and atmospheric stability on the dispersion of air pollutants around an apartment building situated in close proximity to a busy boulevard in a residential district of Sofia, Bulgaria. A series of dispersion simulations were conducted using the Graz Lagrangian Model (GRAL v.22.09) for a range of meteorological conditions, defined as combinations of the direction and velocity of the approaching flow, and of stability conditions within the study area of 1 × 1 km, with a horizontal resolution of 2 m. The resulting spatial distribution revealed the presence of hotspots and strong gradients in the concentration field. A simulation with meteorological data was also conducted, which was aligned with a campaign to monitor vehicular traffic. The sensitivity tests indicate that GRAL is capable of reproducing high-resolution pollutant fields, accounting for building effects at relatively low computational costs. This makes the model potentially attractive for city-wide simulations as well as for air pollution exposure estimation. Full article
(This article belongs to the Special Issue Urban Air Pollution, Meteorological Conditions and Human Health)
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13 pages, 2474 KiB  
Article
The Effect of Clay Infill on Strength of Jointed Sandstone: Laboratory and Analysis
by Chen Cui and Ivan Gratchev
Geotechnics 2024, 4(2), 499-511; https://doi.org/10.3390/geotechnics4020027 (registering DOI) - 25 May 2024
Abstract
The strength of jointed rock is a fundamental factor in the slope stability of rock mass. This research investigates the effect of infill thickness on the strength of jointed rock specimens. Unlike previous studies involving artificial rock-like materials and saw-tooth surfaces, this work [...] Read more.
The strength of jointed rock is a fundamental factor in the slope stability of rock mass. This research investigates the effect of infill thickness on the strength of jointed rock specimens. Unlike previous studies involving artificial rock-like materials and saw-tooth surfaces, this work has been conducted on two natural types of sandstone with various rock surfaces. Natural low-plasticity clay of different thicknesses (1 mm to 3 mm) was used as the infill material. A series of shear box tests with a range of initial normal stresses from 0.5 MPa to 1.5 MPa were performed to obtain high-quality data regarding the shear strength of natural rock and to provide insights into the effect of infill and rock surface roughness on shear strength. The obtained results were also used to improve the current methods of rock strength predictions, which were initially designed to estimate the strength of artificial rock-like material. Based on the obtained laboratory data and the strength estimation using different methods, a newly proposed procedure was proved to provide more accurate estimations of the shear strength of jointed rock. Full article
22 pages, 13155 KiB  
Article
Analysis of Inclusions and Impurities Present in Typical HPDC, Stamping and Extrusion Alloys Produced with Different Scrap Levels
by Manel da Silva, Jaume Pujante, Joanna Hrabia-Wiśnios, Bogusław Augustyn, Dawid Kapinos, Mateusz Węgrzyn and Sonia Boczkal
Metals 2024, 14(6), 626; https://doi.org/10.3390/met14060626 (registering DOI) - 25 May 2024
Abstract
The European Green Deal poses a two-pronged challenge for the automotive industry: migrating to solutions based on light structures, requiring lightweight concepts and light materials, while at the same time avoiding dependence on the importation of these advanced materials. Aluminium alloys are lightweight [...] Read more.
The European Green Deal poses a two-pronged challenge for the automotive industry: migrating to solutions based on light structures, requiring lightweight concepts and light materials, while at the same time avoiding dependence on the importation of these advanced materials. Aluminium alloys are lightweight and cost-effective materials that can successfully meet the requirements of many structural applications; however, their production requires bauxite and other Critical Raw Materials (CRMs), such as Si and Mg. Aluminium alloys are fully recyclable, but scrap is usually contaminated and its use is related to an increment of impurities, tramp elements and undesired inclusions. Traditionally, the use of secondary alloys has been restricted to low-performance applications. The present work analyses the effect that the use of scrap has on the quantity of inclusions present in the alloy and on other properties relevant for material processing. This study was carried out using common alloys associated with three of the most common aluminium processes used in the car manufacturing industry: high-pressure die casting (HPDC) (AB-43500), extrusion (6063) and sheet metal forming (5754 and 6181). The reference alloys were mixed with different levels of scrap (0, 20, 40, 60, 80 and 100%), with an aim to keep the chemical composition as unaffected as possible. The inclusion level of the alloy was characterized using the Prefil Footprinter® test. In addition, the obtained materials, after being cast in an open mould, were subjected to metallographic characterization. Relevant properties were measured to assess the processability of the alloys for the corresponding transforming process using the flowability test for the HPDC alloy and high-temperature compression for the extrusion alloys. The results obtained suggest that the number of inclusions present in the melt highly increase with the amount of scrap used to produce the alloy. These inclusions are also related to a significant loss of flowability, but do not have a noticeable impact on microstructure. Full article
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20 pages, 1283 KiB  
Article
A Feature-Reduction Scheme Based on a Two-Sample t-Test to Eliminate Useless Spectrogram Frequency Bands in Acoustic Event Detection Systems
by Vahid Hajihashemi, Abdorreza Alavi Gharahbagh, Narges Hajaboutalebi, Mohsen Zahraei, José J. M. Machado and João Manuel R. S. Tavares
Electronics 2024, 13(11), 2064; https://doi.org/10.3390/electronics13112064 (registering DOI) - 25 May 2024
Abstract
Acoustic event detection (AED) systems, combined with video surveillance systems, can enhance urban security and safety by automatically detecting incidents, supporting the smart city concept. AED systems mostly use mel spectrograms as a well-known effective acoustic feature. The spectrogram is a combination of [...] Read more.
Acoustic event detection (AED) systems, combined with video surveillance systems, can enhance urban security and safety by automatically detecting incidents, supporting the smart city concept. AED systems mostly use mel spectrograms as a well-known effective acoustic feature. The spectrogram is a combination of frequency bands. A big challenge is that some of the spectrogram bands may be similar in different events and be useless in AED. Removing useless bands reduces the input feature dimension and is highly desirable. This article proposes a mathematical feature analysis method to identify and eliminate ineffective spectrogram bands and improve AED systems’ efficiency. The proposed approach uses a Student’s t-test to compare frequency bands of the spectrogram from different acoustic events. The similarity between each frequency band among events is calculated using a two-sample t-test, allowing the identification of distinct and similar frequency bands. Removing these bands accelerates the training speed of the used classifier by reducing the number of features, and also enhances the system’s accuracy and efficiency. Based on the obtained results, the proposed method reduces the spectrogram bands by 26.3%. The results showed an average difference of 7.77% in the Jaccard, 4.07% in the Dice, and 5.7% in the Hamming distance between selected bands using train and test datasets. These small values underscore the validity of the obtained results for the test dataset. Full article
(This article belongs to the Special Issue Recent Advances in Audio, Speech and Music Processing and Analysis)
21 pages, 7642 KiB  
Article
Influence of Ultrafine Fly Ash and Slag Powder on Microstructure and Properties of Magnesium Potassium Phosphate Cement Paste
by Zheng Jia, Yuhui Zhang and Liwu Mo
Materials 2024, 17(11), 2556; https://doi.org/10.3390/ma17112556 (registering DOI) - 25 May 2024
Abstract
This study investigated the influences of ultrafine fly ash (UFA) and ultrafine slag powder (USL) on the compressive strengths, autogenous shrinkage, phase assemblage, and microstructure of magnesium potassium phosphate cement (MKPC). The findings indicate that the aluminosilicate fractions present in both ultrafine fly [...] Read more.
This study investigated the influences of ultrafine fly ash (UFA) and ultrafine slag powder (USL) on the compressive strengths, autogenous shrinkage, phase assemblage, and microstructure of magnesium potassium phosphate cement (MKPC). The findings indicate that the aluminosilicate fractions present in both ultrafine fly ash and ultrafine slag participate in the acid–base reaction of the MKPC system, resulting in a preferential formation of irregularly crystalline struvite-K incorporating Al and Si elements or amorphous aluminosilicate phosphate products. UFA addition mitigates early age autogenous shrinkage in MKPC-based materials, whereas USL exacerbates this shrinkage. In terms of the sustained mechanical strength development of the MKPC system, ultrafine fly ash is preferred over ultrafine slag powder. MKPC pastes with ultrafine fly ash show greater compressive strength compared to those with ultrafine slag powder at 180 days due to denser interfaces between the ultrafine fly ash particles and hydration products like struvite-K. The incorporation of 30 wt% ultrafine fly ash enhances compressive strengths across all testing ages. Full article
(This article belongs to the Special Issue Reaction Mechanism and Properties of Cement-Based Materials)
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10 pages, 1455 KiB  
Case Report
A Case of Non-Syndromic Congenital Cataracts Caused by a Novel MAF Variant in the C-Terminal DNA-Binding Domain—Case Report and Literature Review
by Sharon H. Zhao, Kai Lee Yap, Valerie Allegretti, Andy Drackley, Alexander Ing, Adam Gordon, Andrew Skol, Patrick McMullen, Brenda L. Bohnsack, Sudhi P. Kurup, Hantamalala Ralay Ranaivo and Jennifer L. Rossen
Genes 2024, 15(6), 686; https://doi.org/10.3390/genes15060686 (registering DOI) - 25 May 2024
Abstract
The MAF gene encodes a transcription factor in which pathogenic variants have been associated with both isolated and syndromic congenital cataracts. We aim to review the MAF variants in the C-terminal DNA-binding domain associated with non-syndromic congenital cataracts and describe a patient with [...] Read more.
The MAF gene encodes a transcription factor in which pathogenic variants have been associated with both isolated and syndromic congenital cataracts. We aim to review the MAF variants in the C-terminal DNA-binding domain associated with non-syndromic congenital cataracts and describe a patient with a novel, disease-causing de novo missense variant. Published reports of C-terminal MAF variants and their associated congenital cataracts and ophthalmic findings were reviewed. The patient we present and his biological parents had genetic testing via a targeted gene panel followed by trio-based whole exome sequencing. A 4-year-old patient with a history of bilateral nuclear and cortical cataracts was found to have a novel, likely pathogenic de novo variant in MAF, NM_005360.5:c.922A>G (p.Lys308Glu). No syndromic findings or anterior segment abnormalities were identified. We report the novel missense variant, c.922A>G (p.Lys308Glu), in the C-terminal DNA-binding domain of MAF classified as likely pathogenic and associated with non-syndromic bilateral congenital cataracts. Full article
(This article belongs to the Special Issue Molecular Diagnosis and Disease Mechanisms in Eye Disorders)
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19 pages, 15715 KiB  
Article
A Semi-Automatic-Based Approach to the Extraction of Underwater Archaeological Features from Ultra-High-Resolution Bathymetric Data: The Case of the Submerged Baia Archaeological Park
by Nicodemo Abate, Crescenzo Violante and Nicola Masini
Remote Sens. 2024, 16(11), 1908; https://doi.org/10.3390/rs16111908 (registering DOI) - 25 May 2024
Abstract
Coastal and underwater archaeological sites pose significant challenges in terms of investigation, conservation, valorisation, and management. These sites are often at risk due to climate change and various human-made impacts such as urban expansion, maritime pollution, and natural deterioration. However, advances in remote [...] Read more.
Coastal and underwater archaeological sites pose significant challenges in terms of investigation, conservation, valorisation, and management. These sites are often at risk due to climate change and various human-made impacts such as urban expansion, maritime pollution, and natural deterioration. However, advances in remote sensing (RS) and Earth observation (EO) technologies applied to cultural heritage (CH) sites have led to the development of various techniques for underwater cultural heritage (UCH) exploration. The aim of this work was the evaluation of an integrated methodological approach using ultra-high-resolution (UHR) bathymetric data to aid in the identification and interpretation of submerged archaeological contexts. The study focused on a selected area of the submerged Archaeological Park of Baia (Campi Flegrei, south Italy) as a test site. The study highlighted the potential of an approach based on UHR digital bathymetric model (DBM) derivatives and the use of machine learning and statistical techniques to automatically extract and discriminate features of archaeological interest from other components of the seabed substrate. The results achieved accuracy rates of around 90% and created a georeferenced vector map similar to that usually drawn by hand by archaeologists. Full article
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37 pages, 10002 KiB  
Article
Towards Enhanced Tunability of Aqueous Biphasic Systems: Furthering the Grasp of Fluorinated Ionic Liquids in the Purification of Proteins
by Sara F. Carvalho, Margarida H. Custódio, Ana B. Pereiro and João M. M. Araújo
Int. J. Mol. Sci. 2024, 25(11), 5766; https://doi.org/10.3390/ijms25115766 (registering DOI) - 25 May 2024
Abstract
This work unfolds functionalized ABSs composed of FILs ([C2C1Im][C4F9SO3] and [N1112(OH)][C4F9SO3]), mere fluoro-containing ILs ([C2C1Im][CF3SO3 [...] Read more.
This work unfolds functionalized ABSs composed of FILs ([C2C1Im][C4F9SO3] and [N1112(OH)][C4F9SO3]), mere fluoro-containing ILs ([C2C1Im][CF3SO3] and [C4C1Im][CF3SO3]), known globular protein stabilizers (sucrose and [N1112(OH)][C4F9SO3]), low-molecular-weight carbohydrate (glucose), and even high-charge density salt (K3PO4). The ternary phase diagrams were determined, stressing that FILs highly increased the ability for ABS formation. The functionalized ABSs (FILs vs. mere fluoro-containing ILs) were used to extract lysozyme (Lys). The ABSs’ biphasic regions were screened in terms of protein biocompatibility, analyzing the impact of ABS phase-forming components in Lys by UV-VIS spectrophotometry, CD spectroscopy, fluorescence spectroscopy, DSC, and enzyme assay. Lys partition behavior was characterized in terms of extraction efficiency (% EE). The structure, stability, and function of Lys were maintained or improved throughout the extraction step, as evaluated by CD spectroscopy, DSC, enzyme assay, and SDS-PAGE. Overall, FIL-based ABSs are more versatile and amenable to being tuned by the adequate choice of the phase-forming components and selecting the enriched phase. Binding studies between Lys and ABS phase-forming components were attained by MST, demonstrating the strong interaction between Lys and FILs aggregates. Two of the FIL-based ABSs (30 %wt [C2C1Im][C4F9SO3] + 2 %wt K3PO4 and 30 %wt [C2C1Im][C4F9SO3] + 25 %wt sucrose) allowed the simultaneous purification of Lys and BSA in a single ABS extraction step with high yield (extraction efficiency up to 100%) for both proteins. The purity of both recovered proteins was validated by SDS-PAGE analysis. Even with a high-charge density salt, the FIL-based ABSs developed in this work seem more amenable to be tuned. Lys and BSA were purified through selective partition to opposite phases in a single FIL-based ABS extraction step. FIL-based ABSs are proposed as an improved extraction step for proteins, based on their biocompatibility, customizable properties, and selectivity. Full article
11 pages, 319 KiB  
Article
Outcomes and Pattern of Care for Spinal Myxopapillary Ependymoma in the Modern Era—A Population-Based Observational Study
by Chenyang Wang, Michael K. Rooney, Christopher Alvarez-Breckenridge, Thomas H. Beckham, Caroline Chung, Brian S. De, Amol J. Ghia, David Grosshans, Nazanin K. Majd, Mary F. McAleer, Susan L. McGovern, Robert Y. North, Arnold C. Paulino, Subha Perni, Jay P. Reddy, Laurence D. Rhines, Todd A. Swanson, Claudio E. Tatsui, Martin C. Tom, Debra N. Yeboa and Jing Liadd Show full author list remove Hide full author list
Cancers 2024, 16(11), 2013; https://doi.org/10.3390/cancers16112013 (registering DOI) - 25 May 2024
Abstract
(1) Background: Myxopapillary ependymoma (MPE) is a rare tumor of the spine, typically slow-growing and low-grade. Optimal management strategies remain unclear due to limited evidence given the low incidence of the disease. (2) Methods: We analyzed data from 1197 patients with spinal MPE [...] Read more.
(1) Background: Myxopapillary ependymoma (MPE) is a rare tumor of the spine, typically slow-growing and low-grade. Optimal management strategies remain unclear due to limited evidence given the low incidence of the disease. (2) Methods: We analyzed data from 1197 patients with spinal MPE from the Surveillance, Epidemiology, and End Results (SEER) database (2000–2020). Patient demographics, treatment modalities, and survival outcomes were examined using statistical analyses. (3) Results: Most patients were White (89.9%) with a median age at diagnosis of 42 years. Surgical resection was performed in 95% of cases. The estimated 10-year overall survival was 91.4%. Younger age (hazard ratio (HR) = 1.09, p < 0.001) and receipt of surgery (HR = 0.43, p = 0.007) were associated with improved survival. Surprisingly, male sex was associated with worse survival (HR = 1.86, p = 0.008) and a younger age at diagnosis compared to females. (4) Conclusions: This study, the largest of its kind, underscores the importance of surgical resection in managing spinal MPE. The unexpected association between male sex and worse survival warrants further investigation into potential sex-specific pathophysiological factors influencing prognosis. Despite limitations, our findings contribute valuable insights for guiding clinical management strategies for spinal MPE. Full article
(This article belongs to the Special Issue State of the Art and New Approaches to Spinal Cord Tumors)
17 pages, 1300 KiB  
Article
Preparation of UiO-66 MOF-Bonded Porous-Layer Open-Tubular Columns Using an In Situ Growth Approach for Gas Chromatography
by Khadejah D. Otaif, Ahmed-Yacine Badjah-Hadj-Ahmed and Zeid Abdullah ALOthman
Molecules 2024, 29(11), 2505; https://doi.org/10.3390/molecules29112505 (registering DOI) - 25 May 2024
Abstract
The thermally stable zirconium-based MOF, UiO-66, was employed for the preparation of bonded porous‑layer open‑tubular (PLOT) GC columns. The synthesis included the in situ growth of the UiO-66 film on the inner wall of the capillary through a one-step solvothermal procedure. SEM–EDX analysis [...] Read more.
The thermally stable zirconium-based MOF, UiO-66, was employed for the preparation of bonded porous‑layer open‑tubular (PLOT) GC columns. The synthesis included the in situ growth of the UiO-66 film on the inner wall of the capillary through a one-step solvothermal procedure. SEM–EDX analysis revealed the formation of a thin, continuous, uniform, and compact layer of UiO-66 polycrystals on the functionalized inner wall of the column. The average polarity (ΔIav = 700) and the McReynolds constants reflected the polar nature of the UiO-66 stationary phase. Several mixtures of small organic compounds and real samples were used to evaluate the separation performance of the fabricated columns. Linear alkanes from n-pentane to n-decane were baseline separated within 1.35 min. Also, a series of six n-alkylbenzenes (C3–C8) were separated within 3 min with a minimum resolution of 3.09, whereas monohalobenzene mixtures were separated at 220 °C within 14s. UiO-66 PLOT columns are ideally suited for the isothermal separation of chlorobenzene structural isomers at 210 °C within 45 s with Rs ≥ 1.37. The prepared column featured outstanding thermal stability (up to 450 °C) without any observed bleeding or significant impact on its performance. This feature enabled the analysis of various petroleum-based samples. Full article
(This article belongs to the Topic Advances in Spectroscopic and Chromatographic Techniques)
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24 pages, 8975 KiB  
Article
Classification and Model Explanation of Traditional Dwellings Based on Improved Swin Transformer
by Shangbo Miao, Chenxi Zhang, Yushun Piao and Yalin Miao
Buildings 2024, 14(6), 1540; https://doi.org/10.3390/buildings14061540 (registering DOI) - 25 May 2024
Abstract
The extraction of features and classification of traditional dwellings plays significant roles in preserving and ensuring the sustainable development of these structures. Currently, challenges persist in subjective classification and the accuracy of feature extraction. This study focuses on traditional dwellings in Gansu Province, [...] Read more.
The extraction of features and classification of traditional dwellings plays significant roles in preserving and ensuring the sustainable development of these structures. Currently, challenges persist in subjective classification and the accuracy of feature extraction. This study focuses on traditional dwellings in Gansu Province, China, employing a novel model named Improved Swin Transformer. This model, based on the Swin Transformer and parallel grouped Convolutional Neural Networks (CNN) branches, aims to enhance the accuracy of feature extraction and classification precision. Furthermore, to validate the accuracy of feature extraction during the prediction process and foster trust in AI systems, explainability research was conducted using Grad-CAM-generated heatmaps. Initially, the Gansu Province Traditional Dwelling Dataset (GTDD) is established. On the constructed GTDD dataset, the Improved Swin Transformer attains an accuracy of 90.03% and an F1 score of 87.44%. Comparative analysis with ResNet-50, ResNeXt-50, and Swin Transformer highlights the outstanding performance of the improved model. The confusion matrix of the Improved Swin Transformer model reveals the classification results across different regions, indicating that the primary influencing factors are attributed to terrain, climate, and cultural aspects. Finally, using Grad-CAM-generated heatmaps for explaining classifications, it is observed that the Improved Swin Transformer model exhibits more accurate localization and focuses on features compared to the other three models. The model demonstrates exceptional feature extraction ability with minimal influence from the surrounding environment. Simultaneously, through the heatmaps generated by the Improved Swin Transformer for traditional residential areas in five regions of Gansu, it is evident that the model accurately extracts architectural features such as roofs, facades, materials, windows, etc. This validates the consistency of features extracted by the Improved Swin Transformer with traditional methods and enhances trust in the model and decision-making. In summary, the Improved Swin Transformer demonstrates outstanding feature extraction ability and accurate classification, providing valuable insights for the protection and style control of traditional residential areas. Full article
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