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  • 1
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    PANGAEA
    In:  Supplement to: Schultz, Martin G; Schröder, Sabine; Lyapina, Olga; Cooper, Owen R; Galbally, Ian; Petropavlovskikh, Irina; von Schneidemesser, Erika; Tanimoto, Hiroshi; Elshorbany, Yasin; Naja, Manish; Seguel, Rodrigo J; Dauert, Ute; Eckhardt, Paul; Feigenspan, Stefan; Fiebig, Markus; Hjellbrekke, Anne-Gunn; Hong, You-Deog; Kjeld, Peter Christian; Koide, Hiroshi; Lear, Gary; Tarasick, David; Ueno, Mikio; Wallasch, Markus; Baumgardner, Darrel; Chuang, Ming-Tung; Gillett, Robert; Lee, Meehye; Molloy, Suzie; Moolla, Raeesa; Wang, Tao; Sharps, Katrina; Adame, Jose A; Ancellet, Gerard; Apadula, Francesco; Artaxo, Paulo; Barlasina, Maria E; Bogucka, Magdalena; Bonasoni, Paolo; Chang, Limseok; Colomb, Aurelie; Cuevas-Agulló, Emilio; Cupeiro, Manuel; Degorska, Anna; Ding, Aijun; Fröhlich, Marina; Frolova, Marina; Gadhavi, Harish; Gheusi, Francois; Gilge, Stefan; Gonzalez, Margarita Y; Gros, Valérie; Hamad, Samera H; Helmig, Detlev; Henriques, Diamantino; Hermansen, Ove; Holla, Robert; Hueber, Jacques; Im, Ulas; Jaffe, Daniel A; Komala, Ninong; Kubistin, Dagmar; Lam, Ka-Se; Laurila, Tuomas; Lee, Haeyoung; Levy, Ilan; Mazzoleni, Claudio; Mazzoleni, Lynn R; McClure-Begley, Audra; Mohamad, Maznorizan; Murovec, Marijana; Navarro-Comas, Monica; Nicodim, Florin; Parrish, David; Read, Katie Alana; Reid, Nick; Ries, Ludwig; Saxena, Pallavi; Schwab, James J; Scorgie, Yvonne; Senik, Irina; Simmonds, Peter; Sinha, Vinayak; Skorokhod, Andrey I; Spain, Gerard; Spangl, Wolfgang; Spoor, Ronald; Springston, Stephen R; Steer, Kelvyn; Steinbacher, Martin; Suharguniyawan, Eka; Torre, Paul; Trickl, Thomas; Weili, Lin; Weller, Rolf; Xu, Xiaobin; Xue, Likun; Ma, Zhiqiang (2017): Tropospheric Ozone Assessment Report: Database and Metrics Data of Global Surface Ozone Observations. Elementa - Science of the Anthropocene, 5:58, 26 pp, https://doi.org/10.1525/elementa.244
    Publication Date: 2023-11-18
    Description: In support of the first Tropospheric Ozone Assessment Report (TOAR) a relational database of global surface ozone observations has been developed and populated with hourly measurement data and enhanced metadata. A comprehensive suite of ozone metrics products including standard statistics, health and vegetation impact metrics, and trend information, are made available through a common data portal and a web interface. These data form the basis of the TOAR analyses focusing on human health, vegetation, and climate relevant ozone issues, which are part of this special feature. By combining the data from almost 10,000 measurement sites around the world with global metadata information, new analyses of surface ozone have become possible, such as the first globally consistent characterisations of measurement sites as either urban or rural/remote. Exploitation of these global metadata allow for new insights into the global distribution, and seasonal and long-term changes of tropospheric ozone. Cooperation among many data centers and individual researchers worldwide made it possible to build the world's largest collection of in-situ hourly surface ozone data covering the period from 1970 to 2015. Considerable effort was made to harmonize and synthesize data formats and metadata information from various networks and individual data submissions. Extensive quality control was applied to identify questionable and erroneous data, including changes in apparent instrument offsets or calibrations. Such data were excluded from TOAR data products. Limitations of a posteriori data quality assurance are discussed. As a result of the work presented here, global coverage of surface ozone data has been significantly extended. Yet, large gaps remain in the surface observation network both in terms of regions without monitoring, and in terms of regions that have monitoring programs but no public access to the data archive. Therefore future improvements to the database will require not only improved data harmonization, but also expanded data sharing and increased monitoring in data-sparse regions.
    Keywords: TOAR; Tropospheric Ozone Assessment Report
    Type: Dataset
    Format: application/zip, 7 datasets
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  • 2
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    Physiologia plantarum 85 (1992), S. 0 
    ISSN: 1399-3054
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: A highly efficient method of regenerating fertile, phenotypically normal plants from shoot apex cultures of T. aestivum was developed. The hypodermal layer (L2) of the vegetative apex containing germ line precursor cells could be located with bright field microscopy and targeted for microinjection. Fluorescently labelled dextrans were used as markers to develop a microinjection procedure which did not disrupt nuclear or cytoplasmic structure. This procedure was used to inject plasmid DNA into L2 cells. Capillary microinjection did not shear the plasmid DNA and delivery of DNA was confirmed by polymerase chain reaction analysis of DNA isolated from injected apices. The significance of these findings in relation to the development of cereal transformation systems will be discussed.
    Type of Medium: Electronic Resource
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  • 3
    Publication Date: 2019-09-03
    Description: Hepatitis C virus (HCV) is a highly variable pathogen that frequently establishes chronic infection. This genetic variability is affected by the adaptive immune response but the contribution of other host factors is unclear. Here, we examined the role played by interferon lambda-4 (IFN-λ4) on HCV diversity; IFN-λ4 plays a crucial role in spontaneous clearance or establishment of chronicity following acute infection. We performed viral genome-wide association studies using human and viral data from 485 patients of white ancestry infected with HCV genotype 3a. We demonstrate that combinations of host genetic variants, which determine IFN-λ4 protein production and activity, influence amino acid variation across the viral polyprotein - not restricted to specific viral proteins or HLA restricted epitopes - and modulate viral load. We also observed an association with viral di-nucleotide proportions. These results support a direct role for IFN-λ4 in exerting selective pressure across the viral genome, possibly by a novel mechanism.
    Electronic ISSN: 2050-084X
    Topics: Biology , Medicine , Natural Sciences in General
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  • 4
    Publication Date: 2021-08-27
    Description: The transfer of water from a swimming pool to the treatment location is key in determining the effectiveness of water treatment by filtration in removing turbidity and managing the risk from particulate material, including microbial pathogens, such as Cryptosporidium spp. A key recommendation for pool operators when dealing with an accidental faecal release (the likely main source of high Cryptosporidium oocyst concentrations in pools) is that the pool water should be filtered for at least six turnover cycles prior to use. This paper briefly outlines the theoretical basis of what has become known as the Gage–Bidwell Law of Dilution, which provides a basis for this recommendation, and extends the idea to account for the impact of filter efficiency. The Gage–Bidwell Law reveals that for each pool turnover 63% of the water resident in the pool at the start of the turnover period will have been recirculated. Building on this, we demonstrate that both filter efficiency and water-turnover time are important in determining filtration effectiveness and can be combined through a single parameter we term ‘particle-turnover’. We consider the implications of the Gage–Bidwell Law (as referred to in the original 1926 paper) for the dynamics of the ‘dirt’ content of pool water, whether in terms of a specific particle size range (e.g., Cryptosporidium oocysts) or turbidity.
    Electronic ISSN: 2073-4441
    Topics: Energy, Environment Protection, Nuclear Power Engineering
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  • 5
    Publication Date: 2021-05-19
    Description: This paper presents a synthesis of mainly published information relating to the cetaceans of the Indian Ocean Sanctuary (IOS). It highlights a number of new studies and other initiatives linked to the Sanctuary and reviews the current understanding of the biology of the Sanctuary’s cetaceans. Cetaceans in the IOS are exposed to a range of threats, including by-catch and the effects of climate change. Whilst no quantification can be made of these threats at this time, they may still be significant for the conservation of populations. The role of the IOS in stimulating research to further establish the status of cetacean populations is acknowledged.
    Description: WDCS
    Description: Published
    Keywords: Marine mammals
    Repository Name: AquaDocs
    Type: Book , Non-Refereed
    Format: 947769 bytes
    Format: application/pdf
    Format: 34
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  • 6
    Publication Date: 2022-01-14
    Description: Commission Decision of 25 February 2016 setting up a Scientific, Technical and Economic Committee for Fisheries, C(2016) 1084, OJ C 74, 26.2.2016, p. 4–10. The Commission may consult the group on any matter relating to marine and fisheries biology, fishing gear technology, fisheries economics, fisheries governance, ecosystem effects of fisheries, aquaculture or similar disciplines. This report is from STECF Expert Working Group 21-15: 2021 stock assessments of demersal stocks in Adriatic, Ionian and Aegean Seas from the meeting held remotely from 18th to 22th October 2021. A total of 9 fish stocks were evaluated. One stock had prior advice from 2020 for 2021 and 2022, and this is reiterated here. Index advice for 2022 and 2023 is provide for one other stock. The EWG reports age based assessments and short term forecasts for 5 of the remaining 7 stocks and surplus production assessments for two stocks. The content of the report gives the STECF terms of reference, the basis of the evaluations and advice, summaries of state of stock and advised based on either the MSY approach for assessed stocks or the precautionary approach for category 3 based advice. The report contains the full stock assessment reports for the 7 assessments, the exploration of assessments and category 3 evaluations for the remaining five stocks. The report also contains the STECF observations and conclusions on the assessment report. These conclusions come from the STECF Plenary meeting November 2021.
    Description: European Commission
    Description: European Union, Joint Research Centre
    Description: Published
    Description: Refereed
    Keywords: Fisheries economics ; Fisheries biology ; Fisheries governance ; Fishing gear technology ; Fish stock assessment ; Management advice ; MSY ; Modelling
    Repository Name: AquaDocs
    Type: Report
    Format: 467pp
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  • 7
    Publication Date: 2022-01-14
    Description: The working group was held in remotely, from 12th to 20th Sept 2020. The meeting was attended by 14 experts in total, including two STECF member and two JRC experts. The EWG had two observers who attended part time. The objective of the Mediterranean Methodology EWG 20-15 was to carry out assessments and provide draft advice for stocks identified in the ToR supplied by STECF. An initial plenary session commenced at 09:30 on the first day. The ToRs were discussed and examined in detail. Stocks were allocated to participants based on expertise. An ftp repository was created ad-hoc to share documents, data and scripts and prepare the report. The stocks were evaluated by the GSA groups identified in the ToRs. Most of the work was concluded by Tuesday 20 Sept, after 7 full days of work, and some additional work at the weekend. Over the 7 working days plenary sessions were held each day to monitor progress and share results. The overall conclusions for each stock were discussed and finalized in plenary on the Tuesday.
    Description: European Commission
    Description: European Union, Joint Research Centre
    Description: Published
    Description: Refereed
    Keywords: Fish stock assessment ; Fisheries biology ; Fisheries economics ; Fisheries governance ; Fishing gear technology ; Management advice ; Modelling ; MSY
    Repository Name: AquaDocs
    Type: Report
    Format: 592pp
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  • 8
    Publication Date: 2022-01-14
    Description: The working group was held in remotely, from 6th to 10th Sept 2021. The meeting was attended by 20 experts in total, including two STECF members and two JRC experts along with one observer. The objective of the Mediterranean Methodology EWG 21-11 was to carry out assessments and provide draft advice for stocks identified in the ToR supplied by STECF. An initial plenary session commenced at 09:00 on the first day. The ToRs were discussed and examined in detail. Stocks were allocated to participants based on expertise. An ad-hoc ftp repository was created to share documents, data and scripts and prepare the report. The stock assessments were evaluated by all participants. Following EWG 21-02 data preparation EWG data was available for assessments much earlier in the meeting, in all cases by Tuesday night. For stocks with assessment issues some sensitivity test were possible, but for DWRS in GSA 1,5,6,7 exploratory assessments were not fully concluded given time limitations. Over the week plenary sessions were held each day to monitor progress and share results. The overall conclusions for each stock were discussed and finalized in plenary on the Friday. After the main meeting it became apparent that the selected assessment for red and blue shrimp in GSA 1 had issues with the form of the model, the model was re-examined and details circulated to all EWG participants. A short 45minute plenary was held on Tuesday 21st and a revised assessment was agreed. This report contains this final assessment and advice based on it.
    Description: European Commission
    Description: European Union, Joint Research Centre
    Description: Published
    Description: Refereed
    Keywords: Fish stock assessment ; Fisheries biology ; Fisheries economics ; Fisheries governance ; Fishing gear technology ; Management advice ; Modelling ; MSY
    Repository Name: AquaDocs
    Type: Report
    Format: 678pp
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  • 9
    Publication Date: 2022-01-13
    Description: Commission Decision of 25 February 2016 setting up a Scientific, Technical and Economic Committee for Fisheries, C(2016) 1084, OJ C 74, 26.2.2016, p. 4–10. The Commission may consult the group on any matter relating to marine and fisheries biology, fishing gear technology, fisheries economics, fisheries governance, ecosystem effects of fisheries, aquaculture or similar disciplines. . This report is from STECF Expert Working Group 19-16: 2019 stock assessments of demersal stocks in the Adriatic Sea from the meeting in Rome Italy from 14th to 20th October 2019. A total of seven fish species were evaluated for GSA 17, 18 and 19. The EWG reports age based assessments and short term forecasts for all seven stocks. The content of the report gives the STECF terms of reference, the basis of the evaluations and advice, summaries of state of stock and advised based on either the MSY approach for assessed. The report contains the full stock assessment reports for the seven assessments, and three exploratory assessments for deep-water rose shrimp for each GSA separately. Advice for deep-water rose shrimp is based on the combined stock, the report also contains the STECF observations and conclusions on the assessment report. These conclusions come from the STECF Plenary meeting November 2019.
    Description: European Commission
    Description: European Union, Joint Research Centre
    Description: Published
    Description: Refereed
    Keywords: Fish stock assessment ; Modelling ; Management advice ; Fisheries biology ; Fishing gear technology ; Fisheries economics ; Fisheries governance ; Ecosystem effects of fisheries ; MSY
    Repository Name: AquaDocs
    Type: Report
    Format: 380pp.
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  • 10
    Publication Date: 2022-01-13
    Description: The working group was held in remotely, from 7th to 18th Sept 2020. The meeting was attended by 21 experts in total, including three STECF members and four JRC experts. The EWG had two observers who attended part time. The objective of the Mediterranean Methodology EWG 20-09 was to carry out assessments and provide draft advice for stocks identified in the ToR supplied by STECF. An initial plenary session commenced at 09:30 on the first day. The ToRs were discussed and examined in detail. Stocks were allocated to participants based on expertise. An ftp repository was created ad-hoc to share documents, data and scripts and prepare the report. The stock assessments were evaluated by the by all participants. Most of the work was concluded by Tuesday 15 Sept, after 7 full days of work, and some additional work at the weekend. However, two stocks remained to be completed, this extra work was carried out largely by two participant with support from small subgroups. The WG met for a final session on Friday 18 Sept. to conclude the work on one stock. Following extensive trials the last stock could not be assessed with an analytic age based assessment and advice was based on the MEDITS index. Over the first 7 working days plenary sessions were held each day to monitor progress and share results. The overall conclusions for each stock were discussed and finalized in plenary on the Tuesday, though the last assessment was finalised on the following Friday, the last day of the meeting.
    Description: European Commission
    Description: European Union, Joint Research Centre
    Description: Published
    Description: Refereed
    Keywords: Stock assessment ; Management advice ; MSY ; Fisheries biology ; Fisheries economics ; Fisheries governance ; Fishing gear technology
    Repository Name: AquaDocs
    Type: Report
    Format: 707pp.
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