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  • Articles  (49)
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  • 1
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    Using Tablet for visual exploration of second-generation sequencing data (2013)
    Oxford University Press
    Details
    Publication Date: 2013-03-21
    Description: The advent of second-generation sequencing (2GS) has provided a range of significant new challenges for the visualization of sequence assemblies. These include the large volume of data being generated, short-read lengths and different data types and data formats associated with the diversity of new sequencing technologies. This article illustrates how Tablet—a high-performance graphical viewer for visualization of 2GS assemblies and read mappings—plays an important role in the analysis of these data. We present Tablet, and through a selection of use cases, demonstrate its value in quality assurance and scientific discovery, through features such as whole-reference coverage overviews, variant highlighting, paired-end read mark-up, GFF3-based feature tracks and protein translations. We discuss the computing and visualization techniques utilized to provide a rich and responsive graphical environment that enables users to view a range of file formats with ease. Tablet installers can be freely downloaded from http://bioinf.hutton.ac.uk/tablet in 32 or 64-bit versions for Windows, OS X, Linux or Solaris. For further details on the Tablet, contact tablet@hutton.ac.uk.
    Print ISSN: 1467-5463
    Electronic ISSN: 1477-4054
    Topics: Biology , Computer Science
    Published by Oxford University Press
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    PAPER CURRENT
  • 2
    Electronic Resource
    Electronic Resource
    Rayleigh wave magnitude scaleM s (1973)
    Springer
    Pure and applied geophysics 103 (1973), S. 406-414 
    Details
    ISSN: 1420-9136
    Source: Springer Online Journal Archives 1860-2000
    Topics: Geosciences , Physics
    Notes: Summary TheM s Rayleigh wave magnitude formula is revised for purposes of eliminating the variable effects of near distances and propagation pats on the values computed from standard long period seismograms. The improved formulation employs a revised distance correction function and period dependent path correction that normalisesM s to large teleseismic distance, 20 second values. The method for computing the path corrections is described. The magnitude scale presented here givesM s values which are within ±0.1 magnitude units of the Gutenberg and Prague magnitude formulae.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF00876419
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    Paper (German National Licenses)
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  • 3
    Electronic Resource
    Electronic Resource
    Seismic source in East Kazakhstan (1974)
    [s.l.] : Nature Publishing Group
    Nature 248 (1974), S. 743-745 
    Details
    ISSN: 1476-4687
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
    Notes: [Auszug] Figure 1 shows the P seismograms (b, e, h] for the event, from Yellowknife, Canada (YKA), Warramunga, Australia (WRA) and Gauribidanur, India (GBA). The YKA and WRA seismograms show two arrivals 7.5 s apart; at WRA the second arrival seems to have reversed polarity relative to P, but the YKA record ...
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1038/248743a0
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    Paper (German National Licenses)
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  • 4
    Electronic Resource
    Electronic Resource
    Two Recent British Earthquakes recorded at the U.K. Atomic Energy Authority Seismometer Array at Eskdalemuir (1964)
    [s.l.] : Nature Publishing Group
    Nature 201 (1964), S. 484-485 
    Details
    ISSN: 1476-4687
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
    Notes: [Auszug] Since the construction of the station, the concept of a seismic monitoring and detection system has radically changed. From the requirement of a network of stations spaced some hundreds of kilometres apart, the emphasis now is on a smaller number of low-noise stations working at ranges of several ...
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1038/201484a0
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  • 5
    Electronic Resource
    Electronic Resource
    Ground to Air Coupled Waves from a Distant Earthquake (1968)
    [s.l.] : Nature Publishing Group
    Nature 220 (1968), S. 686-687 
    Details
    ISSN: 1476-4687
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
    Notes: [Auszug] The seismic waves from this earthquake were registered at UKAEA, Blacknest, by a long period vertical component seismometer and were recorded on one track of a multi-channel magnetic tape system. Other channels of this system were recording the outputs of a number of microbarographs spaced several ...
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1038/220686a0
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  • 6
    Electronic Resource
    Electronic Resource
    The seismic disturbance on 1986 August 1 near Novaya Zemlya: a source of concern? (1989)
    Oxford, UK : Blackwell Publishing Ltd
    Geophysical journal international 98 (1989), S. 0 
    Details
    ISSN: 1365-246X
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences
    Notes: On 1986 August 1 a small seismic disturbance occurred to the east of a Soviet nuclear test site at Novaya Zemlya. Reported attempts to identify the nature of the source using only short-period seismological data recorded at regional distances were unsuccessful. However, by using teleseismic P-wave data it is possible to identify the source as an earthquake which occurred within the crust at a depth of 24 km. The source is shown to have a double-couple mechanism with a well-constrained fault-plane solution. The identification as an earthquake is supported by the mb: Ms evidence.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1111/j.1365-246X.1989.tb02290.x
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  • 7
    Electronic Resource
    Electronic Resource
    Putting nuclear-test monitoring to the test (1999)
    [s.l.] : Macmillan Magazines Ltd.
    Nature 398 (1999), S. 474-475 
    Details
    ISSN: 1476-4687
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
    Notes: [Auszug] On the 22 August 1998, 0.1 kilotonnes of conventional explosives was fired underground at the nuclear test site of the former Soviet Union at Degelen Mountain in eastern Kazakhstan. This explosion, which we refer to as K980822, was carried out by the Republic of Kazakhstan, in cooperation with ...
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1038/19000
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  • 8
    Electronic Resource
    Electronic Resource
    How and Why to Record Broad Band Seismic Signals (1972)
    [s.l.] : Nature Publishing Group
    Nature 239 (1972), S. 154-155 
    Details
    ISSN: 1476-4687
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
    Notes: [Auszug] The Kirnos seismograph is an electromagnetic seismometer with a natural frequency (/0) of 0.04 Hz- and damping factor (n) of 0.5 loosely coupled to a heavily damped galvanometer Oz=8.0, /0 = 0.833 Hz). We obtain the Kirnos response by electronically shaping the output of a Geotech S-ll seismometer ...
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1038/239154a0
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    Paper (German National Licenses)
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  • 9
    Electronic Resource
    Electronic Resource
    Estimating the Firing Depth of Underground Explosions (1972)
    [s.l.] : Nature Publishing Group
    Nature 237 (1972), S. 26-28 
    Details
    ISSN: 1476-4687
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
    Notes: [Auszug] If F (w) and I(w) are the effects of absorption and recording system, respectively, at angular frequency w, I(w) will usually be known for any given recording system and F(w) can be written as an amplitude term exp(?w T/2QAV) and a phase shift. T is the travel time and QAV the effective average Q ...
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1038/237026a0
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  • 10
    Electronic Resource
    Electronic Resource
    Is the velocity of P n an indicator of Q α ? (1976)
    [s.l.] : Nature Publishing Group
    Nature 264 (1976), S. 531-531 
    Details
    ISSN: 1476-4687
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
    Notes: [Auszug] The hypothesis has important consequences for the measurement of magnitude (mb) and the proposal made by the United States and the Soviet Union to limit the size of their nuclear weapon tests stimulated further investigations of the idea. There is not an obvious way of doing so because ...
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1038/264531a0
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