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  • 11
    Publication Date: 2014-09-20
    Description: Author(s): M. Stern, G. Catelani, Y. Kubo, C. Grezes, A. Bienfait, D. Vion, D. Esteve, and P. Bertet We present measurements of superconducting flux qubits embedded in a three dimensional copper cavity. The qubits are fabricated on a sapphire substrate and are measured by coupling them inductively to an on-chip superconducting resonator located in the middle of the cavity. At their flux-insensitive... [Phys. Rev. Lett. 113, 123601] Published Fri Sep 19, 2014
    Keywords: Atomic, Molecular, and Optical Physics
    Print ISSN: 0031-9007
    Electronic ISSN: 1079-7114
    Topics: Physics
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  • 12
    Publication Date: 2014-11-27
    Description: White blood cell (WBC) count is a common clinical measure used as a predictor of certain aspects of human health, including immunity and infection status. WBC count is also a complex trait that varies among individuals and ancestry groups. Differences in linkage disequilibrium structure and heterogeneity in allelic effects are expected to play a role in the associations observed between populations. Prior genome-wide association study (GWAS) meta-analyses have identified genomic loci associated with WBC and its subtypes, but much of the heritability of these phenotypes remains unexplained. Using GWAS summary statistics for over 50 000 individuals from three diverse populations (Japanese, African-American and European ancestry), a Bayesian model methodology was employed to account for heterogeneity between ancestry groups. This approach was used to perform a trans-ethnic meta-analysis of total WBC, neutrophil and monocyte counts. Ten previously known associations were replicated and six new loci were identified, including several regions harboring genes related to inflammation and immune cell function. Ninety-five percent credible interval regions were calculated to narrow the association signals and fine-map the putatively causal variants within loci. Finally, a conditional analysis was performed on the most significant SNPs identified by the trans-ethnic meta-analysis (MA), and nine secondary signals within loci previously associated with WBC or its subtypes were identified. This work illustrates the potential of trans-ethnic analysis and ascribes a critical role to multi-ethnic cohorts and consortia in exploring complex phenotypes with respect to variants that lie outside the European-biased GWAS pool.
    Print ISSN: 0964-6906
    Electronic ISSN: 1460-2083
    Topics: Biology , Medicine
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  • 13
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 1998-03-28
    Description: The metabotropic glutamate receptors (mGluRs) are widely distributed in the brain and play important roles in synaptic plasticity. Here it is shown that some types of mGluRs are activated not only by glutamate but also by extracellular Ca2+ (Ca2+o). A single amino acid residue was found to determine the sensitivity of mGluRs to Ca2+o. One of the receptors, mGluR1alpha, but not its point mutant with reduced sensitivity to Ca2+o, caused morphological changes when transfected into mammalian cells. Thus, the sensing of Ca2+o by mGluRs may be important in cells under physiological condition.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Kubo, Y -- Miyashita, T -- Murata, Y -- New York, N.Y. -- Science. 1998 Mar 13;279(5357):1722-5.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Neurophysiology, Tokyo Metropolitan Institute for Neuroscience, Musashidai 2-6, Fuchu, Tokyo 183-8526, Japan. ykubo@tmin.ac.jp〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/9497291" target="_blank"〉PubMed〈/a〉
    Keywords: Actins/ultrastructure ; Amino Acid Sequence ; Animals ; Binding Sites ; Brain/metabolism ; CHO Cells ; Calcium/*metabolism/pharmacology ; Cell Size ; Cricetinae ; Cyclic AMP/metabolism ; G Protein-Coupled Inwardly-Rectifying Potassium Channels ; Glutamic Acid/metabolism/pharmacology ; Molecular Sequence Data ; Oocytes ; Point Mutation ; Potassium Channels/metabolism ; *Potassium Channels, Inwardly Rectifying ; Rats ; Receptors, Metabotropic Glutamate/chemistry/genetics/*metabolism ; Recombinant Fusion Proteins/metabolism ; Second Messenger Systems ; Transfection ; Xenopus laevis
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 14
    Publication Date: 2015-07-25
    Description: Microbial life inhabits deeply buried marine sediments, but the extent of this vast ecosystem remains poorly constrained. Here we provide evidence for the existence of microbial communities in ~40 degrees to 60 degrees C sediment associated with lignite coal beds at ~1.5 to 2.5 km below the seafloor in the Pacific Ocean off Japan. Microbial methanogenesis was indicated by the isotopic compositions of methane and carbon dioxide, biomarkers, cultivation data, and gas compositions. Concentrations of indigenous microbial cells below 1.5 km ranged from 〈10 to ~10(4) cells cm(-3). Peak concentrations occurred in lignite layers, where communities differed markedly from shallower subseafloor communities and instead resembled organotrophic communities in forest soils. This suggests that terrigenous sediments retain indigenous community members tens of millions of years after burial in the seabed.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Inagaki, F -- Hinrichs, K-U -- Kubo, Y -- Bowles, M W -- Heuer, V B -- Hong, W-L -- Hoshino, T -- Ijiri, A -- Imachi, H -- Ito, M -- Kaneko, M -- Lever, M A -- Lin, Y-S -- Methe, B A -- Morita, S -- Morono, Y -- Tanikawa, W -- Bihan, M -- Bowden, S A -- Elvert, M -- Glombitza, C -- Gross, D -- Harrington, G J -- Hori, T -- Li, K -- Limmer, D -- Liu, C-H -- Murayama, M -- Ohkouchi, N -- Ono, S -- Park, Y-S -- Phillips, S C -- Prieto-Mollar, X -- Purkey, M -- Riedinger, N -- Sanada, Y -- Sauvage, J -- Snyder, G -- Susilawati, R -- Takano, Y -- Tasumi, E -- Terada, T -- Tomaru, H -- Trembath-Reichert, E -- Wang, D T -- Yamada, Y -- New York, N.Y. -- Science. 2015 Jul 24;349(6246):420-4. doi: 10.1126/science.aaa6882. Epub 2015 Jul 23.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Kochi Institute for Core Sample Research, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Nankoku, Kochi 783-8502, Japan. Research and Development Center for Marine Resources, JAMSTEC, Yokosuka 237-0061, Japan. ; MARUM Center for Marine Environmental Sciences, University of Bremen, D-28359 Bremen, Germany. ; Center for Deep-Earth Exploration, JAMSTEC, Yokohama 236-0061, Japan. Research and Development Center for Ocean Drilling Science, JAMSTEC, Yokohama 236-0001, Japan. ; College of Earth, Ocean, and Atmospheric Sciences, Oregon State University, Corvallis, OR 97331, USA. ; Research and Development Center for Marine Resources, JAMSTEC, Yokosuka 237-0061, Japan. Department of Subsurface Geobiological Analysis and Research, JAMSTEC, Yokosuka 237-0061, Japan. ; Research and Development Center for Marine Resources, JAMSTEC, Yokosuka 237-0061, Japan. Department of Biogeochemistry, JAMSTEC, Yokosuka 237-0061, Japan. ; Center for Geomicrobiology, Department of Bioscience, Aarhus University, DK-8000 Aarhus C, Denmark. ; Department of Environmental Genomics, J. Craig Venter Institute, Rockville, MD 20850, USA. ; Geological Survey of Japan, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki 305-8567, Japan. ; Department of Geology and Petroleum Geology, School of Geosciences, University of Aberdeen, Aberdeen AB2A 3UE, UK. ; Department of Applied Geosciences and Geophysics, Montanuniversitat, 8700 Leoben, Austria. ; School of Geography, Earth and Environmental Sciences, University of Birmingham, Birmingham B15 2TT, UK. ; Environmental Management Research Institute, AIST, Tsukuba, Ibaraki 305-8569, Japan. ; The State Key Laboratory of Pharmaceutical Biotechnology, School of Life Science, Nanjing University, Nanjing, Jiangsu 210093, China. ; Center for Advanced Marine Core Research, Kochi University, Nankoku, Kochi 783-8502, Japan. ; Department of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA. ; Petroleum and Marine Resources Research Division, Korea Institute of Geoscience and Mineral Resources, Yuseong-gu, Daejeon 305-350, Korea. ; Department of Earth Sciences, University of New Hampshire, Durham, NH 03824, USA. ; Department of Earth and Atmospheric Sciences, University of Nebraska-Lincoln, Lincoln, NE 68588, USA. ; Department of Earth Sciences, University of California Riverside, Riverside, CA 92521, USA. ; Graduate School of Oceanography, University of Rhode Island, Narragansett, RI 02882, USA. ; Department of Earth Science, Rice University, Houston, TX 77005, USA. ; School of Earth Science, University of Queensland, Brisbane Queensland 4072, Australia. ; Department of Subsurface Geobiological Analysis and Research, JAMSTEC, Yokosuka 237-0061, Japan. ; Marine Works Japan, Yokosuka 237-0063, Japan. ; Department of Earth Sciences, Graduate School of Science, Chiba University, Chiba 263-8522, Japan. ; Geological and Planetary Sciences, California Institute of Technology, Pasadena, CA 91125, USA. ; Research and Development Center for Ocean Drilling Science, JAMSTEC, Yokohama 236-0001, Japan. Department of Urban Management, Graduate School of Engineering, Kyoto University, Kyoto 615-8540, Japan.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26206933" target="_blank"〉PubMed〈/a〉
    Keywords: Aquatic Organisms/*classification/genetics/metabolism ; Archaea/*classification/genetics/metabolism ; Bacteria/*classification/genetics/metabolism ; Biomarkers/metabolism ; Carbon Dioxide/metabolism ; Coal/*microbiology ; Geologic Sediments/*microbiology ; Japan ; Methane/metabolism ; Methanococcus/classification/genetics/metabolism ; Methanosarcina barkeri/classification/genetics/metabolism ; *Microbial Consortia ; Pacific Ocean ; Seawater/*microbiology
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 15
    Publication Date: 2013-05-21
    Description: Laboratory red blood cell (RBC) measurements are clinically important, heritable and differ among ethnic groups. To identify genetic variants that contribute to RBC phenotypes in African Americans (AAs), we conducted a genome-wide association study in up to ~16 500 AAs. The alpha-globin locus on chromosome 16pter [lead SNP rs13335629 in ITFG3 gene; P 〈 1E–13 for hemoglobin (Hgb), RBC count, mean corpuscular volume (MCV), MCH and MCHC] and the G6PD locus on Xq28 [lead SNP rs1050828; P 〈 1E – 13 for Hgb, hematocrit (Hct), MCV, RBC count and red cell distribution width (RDW)] were each associated with multiple RBC traits. At the alpha-globin region, both the common African 3.7 kb deletion and common single nucleotide polymorphisms (SNPs) appear to contribute independently to RBC phenotypes among AAs. In the 2p21 region, we identified a novel variant of PRKCE distinctly associated with Hct in AAs. In a genome-wide admixture mapping scan, local European ancestry at the 6p22 region containing HFE and LRRC16A was associated with higher Hgb. LRRC16A has been previously associated with the platelet count and mean platelet volume in AAs, but not with Hgb. Finally, we extended to AAs the findings of association of erythrocyte traits with several loci previously reported in Europeans and/or Asians, including CD164 and HBS1L-MYB . In summary, this large-scale genome-wide analysis in AAs has extended the importance of several RBC-associated genetic loci to AAs and identified allelic heterogeneity and pleiotropy at several previously known genetic loci associated with blood cell traits in AAs.
    Print ISSN: 0964-6906
    Electronic ISSN: 1460-2083
    Topics: Biology , Medicine
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  • 16
    Publication Date: 2017-02-14
    Description: Author(s): P. Haikka, Y. Kubo, A. Bienfait, P. Bertet, and K. Mølmer We propose a method for detecting the presence of a single spin in a crystal by coupling it to a high-quality factor superconducting planar resonator. By confining the microwave field in the vicinity of a constriction of nanometric dimensions, the coupling constant can be as high as 5–10 kHz. This c… [Phys. Rev. A 95, 022306] Published Mon Feb 06, 2017
    Keywords: Quantum information
    Print ISSN: 1050-2947
    Electronic ISSN: 1094-1622
    Topics: Physics
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  • 17
    Publication Date: 2017-08-10
    Description: Some species of criocerine beetles have a hyper-elongated part of the intromittent organ called a flagellum. In resting position, the flagellum is stored in a specialized internal sac in the intromittent organ. This specialized state of the flagellum and internal sac is indispensable during copulation for flagellar insertion into the female spermathecal duct for sperm transfer. However, the morphogenesis of the flagellum does not generate the active state of the flagellum; rather, the flagellum is generated in an inactive and completely coiled state. After eclosion, males of Lema coronata evert and withdraw the internal sac multiple times before sexual maturation, without mounting a female. This behaviour serves to uncoil the flagellum and guide it into the active state with the aid of surface structures on the internal sac. A closely related species, Lema dilecta , also has a long flagellum and undergoes the same behaviour to place the flagellum in the active position. However, some other species of criocerine beetles with much shorter flagella can attain the active state without exhibiting this behaviour. Based on a previously proposed phylogenetic tree, we discuss the evolutionary history of the hyper-elongation of the flagellum and associated behaviour.
    Keywords: behaviour, developmental biology, evolution
    Electronic ISSN: 2054-5703
    Topics: Natural Sciences in General
    Published by Royal Society
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  • 18
    Publication Date: 2016-02-16
    Description: Spontaneous emission of radiation is one of the fundamental mechanisms by which an excited quantum system returns to equilibrium. For spins, however, spontaneous emission is generally negligible compared to other non-radiative relaxation processes because of the weak coupling between the magnetic dipole and the electromagnetic field. In 1946, Purcell realized that the rate of spontaneous emission can be greatly enhanced by placing the quantum system in a resonant cavity. This effect has since been used extensively to control the lifetime of atoms and semiconducting heterostructures coupled to microwave or optical cavities, and is essential for the realization of high-efficiency single-photon sources. Here we report the application of this idea to spins in solids. By coupling donor spins in silicon to a superconducting microwave cavity with a high quality factor and a small mode volume, we reach the regime in which spontaneous emission constitutes the dominant mechanism of spin relaxation. The relaxation rate is increased by three orders of magnitude as the spins are tuned to the cavity resonance, demonstrating that energy relaxation can be controlled on demand. Our results provide a general way to initialize spin systems into their ground state and therefore have applications in magnetic resonance and quantum information processing. They also demonstrate that the coupling between the magnetic dipole of a spin and the electromagnetic field can be enhanced up to the point at which quantum fluctuations have a marked effect on the spin dynamics; as such, they represent an important step towards the coherent magnetic coupling of individual spins to microwave photons.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Bienfait, A -- Pla, J J -- Kubo, Y -- Zhou, X -- Stern, M -- Lo, C C -- Weis, C D -- Schenkel, T -- Vion, D -- Esteve, D -- Morton, J J L -- Bertet, P -- England -- Nature. 2016 Mar 3;531(7592):74-7. doi: 10.1038/nature16944. Epub 2016 Feb 15.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Quantronics Group, SPEC, CEA, CNRS, Universite Paris-Saclay, CEA-Saclay, 91191 Gif-sur-Yvette, France. ; London Centre for Nanotechnology, University College London, London WC1H 0AH, UK. ; Institute of Electronics Microelectronics and Nanotechnology, CNRS UMR 8520, ISEN Department, Avenue Poincare, CS 60069, 59652 Villeneuve d'Ascq Cedex, France. ; Quantum Nanoelectronics Laboratory, BINA, Bar Ilan University, Ramat Gan, Israel. ; Accelerator Technology and Applied Physics Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26878235" target="_blank"〉PubMed〈/a〉
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 19
    Publication Date: 2014-06-17
    Description: Author(s): C. Grezes, B. Julsgaard, Y. Kubo, M. Stern, T. Umeda, J. Isoya, H. Sumiya, H. Abe, S. Onoda, T. Ohshima, V. Jacques, J. Esteve, D. Vion, D. Esteve, K. Mølmer, and P. Bertet Quantum computing promises to tackle computational problems that are intractable with classical computers. Researchers demonstrate that spin ensembles can store quantum information over longer times than previously achieved, a significant step toward a quantum memory. [Phys. Rev. X 4, 021049] Published Mon Jun 16, 2014
    Electronic ISSN: 2160-3308
    Topics: Physics
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  • 20
    Publication Date: 2012-08-11
    Description: Author(s): Y. Kubo, I. Diniz, C. Grezes, T. Umeda, J. Isoya, H. Sumiya, T. Yamamoto, H. Abe, S. Onoda, T. Ohshima, V. Jacques, A. Dréau, J.-F. Roch, A. Auffeves, D. Vion, D. Esteve, and P. Bertet A new method for detecting the magnetic resonance of electronic spins at low temperature is demonstrated. It consists in measuring the signal emitted by the spins with a superconducting qubit that acts as a single-microwave-photon detector, resulting in an enhanced sensitivity. We implement such an ... [Phys. Rev. B 86, 064514] Published Fri Aug 10, 2012
    Keywords: Superfluidity and superconductivity
    Print ISSN: 1098-0121
    Electronic ISSN: 1095-3795
    Topics: Physics
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