ALBERT

Description: Saccharina japonica is a commercially farmed seaweed of global importance. However, disease occurrence during different stages of cultivation can result in substantial economic losses. Identification of the causative agents of disease remains a significant bottleneck to the large scale cultivation of S. japonica. In this study, an aerobic heterotrophic, flagellated, rod-shaped Gram-negative bacterial strain X-8 was isolated from the bleaching diseased S. japonica sporelings. Pathogenecity of strain X-8 was tested by re-infection assay. The ultrastructural changes of infected S. japonica cells by strain X-8 indicated that chloroplasts were the first organelle responding to X-8 infection with deformed structure and later followed by fragmented nucleus. However, the ultra-structure of mitochondria and cell wall remained intact during the re-infection. Based on 16S rRNA gene sequence, morphological and biochemical characteristics, strain X-8 was designated as Pseudoalteromonas piscicida X-8. The pathogenicity of P. piscicida X-8 was identified by Koch's Postulate under laboratory conditions. Our results will not only help to establish a stable experimental model between the pathogenic bacteria and the host S. japonica to further elucidate the virulence mechanisms, but will also provide information for disease management to effectively prevent and mitigate the occurrence of bleaching disease of S. japonica at nursery stage.

Description: Northern peatlands store 300–600 Pg C, of which approximately half are underlain by permafrost. Climate warming and, in some regions, soil drying from enhanced evaporation are progressively threatening this large carbon stock. Here, we assess future CO2 and CH4 fluxes from northern peatlands using five land surface models that explicitly include representation of peatland processes. Under Representative Concentration Pathways (RCP) 2.6, northern peatlands are projected to remain a net sink of CO2 and climate neutral for the next three centuries. A shift to a net CO2 source and a substantial increase in CH4 emissions are projected under RCP8.5, which could exacerbate global warming by 0.21°C (range, 0.09–0.49°C) by the year 2300. The true warming impact of peatlands might be higher owing to processes not simulated by the models and direct anthropogenic disturbance. Our study highlights the importance of understanding how future warming might trigger high carbon losses from northern peatlands.

Description: Detrital muscovite and biotite 40Ar/39Ar analyses are useful tools for studying regional tectonic histories, sediment provenances and paleo-drainage reconstructions. During transport and recycling of detrital micas physical and chemical weathering occurs. This process effects the grain size and age populations ultimately found in river sediments, but is often ignored in provenance studies. Here, we present detrital muscovite and biotite 40Ar/39Ar results of 15 modern sediments from the Yangtze River to address the impact of grainsize on provenance age populations. The beam intensities of 39Ar, formed from 39K by neutron capture reaction during sample irradiation, have been used as an index for grain size. We found that relatively older detrital mica ages of the Yangtze River are often characterized by small 39Ar signals (i.e., grain sizes), and large grain sizes correspond to younger grains. This observation is also revealed by reanalysis of previously reported detrital mica studies in other major river systems (Red and Brahmaputra rivers) and sediments (Scotian Basin, Canada and Antarctic) and probably results from physical and chemical weathering during transport and recycling. Our Yangtze results indicate that detrital muscovite and biotite ages of grainsize ranging from 100 to 1000 μm cover all age components as identified in all dated grains (with a size of 〉100 μm), and thus indicate that detrital mica 40Ar/39Ar analyses should include also small grains from 〉100 μm to reduce the effects of hydraulic sorting and weathering. Grainsizes smaller than 100 μm have not been tested in this study, but will be more difficult to date due to both smaller beam intensities and possible recoil effects.

Description: The anthropogenic trace gases chlorofluorocarbon (CFC)-12 and sulfur hexafluoride (SF6) were measured during 2013 in the eastern tropical South Pacific Ocean (ETSP) offshore Chile and Peru (12°-22°S, 70°-86°W). Since the WOCE P21 line along ~17°S in 1993, the CFC-12 penetration depth increased from ~550 m to ~800 m. In 2013, CFC-12 had penetrated through the bottom of the oxygen deficient zone (ODZ, where oxygen (O2) 〈 4.5 μmol kg−1) at all stations, indicating that a portion of waters in this ODZ are ventilated on timescales 〈 60 years. Isopycnal trends in pSF6 and pCFC-12 ages versus AOU indicated oxygen utilization rates of 11.2 ± 4.7 μmol kg−1 yr−1 just above the ODZ (90–130 m) and 1.0 ± 0.5 μmol kg−1 yr−1 beneath the ODZ (400–700 m). Isopycnal trends in pSF6 ages and nutrients implied fixed N-loss rates of 0.6 ± 0.4 μmol kg−1 yr−1 at the top of the ODZ (~120 m). The pSF6 and pCFC-12 ages were significantly younger than mean ages estimated from one-dimensional transit time distributions, which were difficult to constrain using the SF6 and CFC-12 tracer combination. Despite the fact that tracer concentrations tend to underestimate mean ages, and thus overestimate nutrient regeneration/consumption rates, N-loss rates were undetectable (〈0.5 μmol kg−1 yr−1) within the ODZ itself (~175–400 m). When integrated over depth, the oxygen and nitrogen consumption rates determined above and below the ODZ implied total organic carbon (C) remineralization rates on the order of 0.6 ± 0.1 mol C m−2 yr−1. These low C-export rates, and the decadal ventilation timescale of this ODZ, support a body of work suggesting that the ODZ may be sustained by inputs of high-tracer, low-oxygen waters from the adjacent Peru-Chile coastal upwelling system rather than by organic matter oxidation occurring locally.

Description: Seaweed farming contributes substantial amounts of organic carbon to the ocean, part of which can be locked for a long term in the ocean and perform the function of ocean carbon sequestration, and the other part can be converted into inorganic carbon through microbial mineralization and aerobic respiration, affecting the pCO2, pHT and dissolved oxygen of seawater. It is generally believed that seaweed farming will cause the seawater to become a sink of CO2 due to carbon fixation by macroalgal photosynthesis. However, little attention has been paid to the fact that seaweed farming environment may sometimes become a source rather than a sink of CO2. Here, through in-situ mesocosm cultivation experiments and eight field investigations covering different kelp growth stages in an intensive farming area in China, we found that compared with the surrounding seawater without kelps, the seawater at the fast-growth stage of kelp was a sink of CO2 (pCO2 decreased by 17−73 μatm), but became a source of CO2 at the aging stage of kelp (pCO2 increased by 20−37 μatm). Concurrently, seawater pHT experienced a transition from increase (by 0.02−0.08) to decline (by 0.03−0.04). In-situ mesocosm cultivation experiments showed that the positive environmental effects (i.e., pCO2 decrease and pHT increase) induced by kelps at the early growth stage could be offset within only 3 days at the late-growth and aging stages. The release of dissolved organic carbon by kelps at the late growth stage increased significantly, supporting the enhancement in microbial abundance and respiration, which was manifested by the remarkable decrease in seawater dissolved oxygen, ultimately leading to CO2 release exceeding photosynthetic CO2 absorption. This study suggests that mature farmed kelps should be harvested in time to best utilize their carbon sink function and environmental benefits, which has guiding significance for the rational management of seaweed farming.

Description: Highlights • Microbe-mediated transformation of metal sulfide has enormous environmental impact. • Microbes provide templates for mineralization of metal sulfide crystals. • Sulfate reducing bacteria recover metal ions through metal sulfide precipitation. • Biosynthetic metal sulfide nanoparticles play a big role in pollutant sensing and treatment. • Metal sulfide-microbe biohybrid system has greater prospects in environmental field. Microorganisms play a key role in the natural circulation of various constituent elements of metal sulfides. Some microorganisms (such as Thiobacillus ferrooxidans) can promote the oxidation of metal sulfides to increase the release of heavy metals. However, other microorganisms (such as Desulfovibrio vulgaris) can transform heavy metals into metal sulfides crystals. Therefore, insight into the metal sulfides transformation mediated by microorganisms is of great significance to environmental protection. In this review, first, we discuss the mechanism and influencing factors of microorganisms transforming heavy metals into metal sulfides crystals in different environments. Then, we explore three microbe-mediated transformation forms of heavy metals to metal sulfides and their environmental applications: (1) transformation to metal sulfides precipitation for metal resource recovery; (2) transformation to metal sulfides nanoparticles (NPs) for pollutant treatment; (3) transformation to “metal sulfides-microbe” biohybrid system for clean energy production and pollutant remediation. Finally, we further provide critical views on the application of microbe-mediated metal sulfides transformation in the environmental field and discuss the need for future research.

Description: Highlights • Syn-rift sediments in the northern South China Sea are from the East Cathaysia block. • Rivers delivered sediments migrated from eastern to western region. • Tributaries catchment of the Pearl River started to migrate since the late Eocene. • The migration of the river catchment is related to the west-east topographic swap. • Topographic change was possibly related to the local tectonic uplift and exhumation. We examined an International Ocean Discovery Program (IODP) drilling core from Site U1501, located on the distal margin of the northern South China Sea (SCS) basin to unravel the sediment provenance evolution in the Paleogene and the evolution of river catchments during basin opening. We attempt to understand the major factors driving river development in a rift basin by utilizing provenance tools to constrain sediment transport pathways and compare these with the regional tectonics during the Paleogene in order to resolve competing models for drainage evolution and test their relationships with the evolving topography of SW China and the SE Tibetan Plateau. For this purpose, ten samples were collected from a 200-m-thick, syn-rift Eocene/pre-Eocene interval. Detrital zircon U-Pb data were collected by LA-ICP-MS to identify the sediment provenance and differentiate fluvial sources. Bulk rock geochemistry data was utilized to shed light on chemical weathering conditions and compositional maturity to further decipher sediment transportation patterns. We compare our data with adjacent IODP Site U1435 and several industrial boreholes located in the Pearl River Mouth Basin (PRMB). We applied multiple statistical tests, including K-S, Monte Carlo mixing and multidimensional scaling testing, to evaluate U-Pb age spectra similarities and to estimate endmember contributions from a variety of source areas. Our results from Site U1501 show that sediments deposited as fluvial sands during the rifting stage, were predominantly derived from the East Cathaysia block, probably from local sources. A progressive increase in older detrital zircon U-Pb ages peaks (〉200 Ma) was observed at Site U1435 and in PRMB strata, signaling a spatial shift in sediment provenance from east to west occurring between the late Eocene and the early Oligocene. This trend reflects a transition in sediment delivery from local small-catchment streams to a more regional drainage eroding the east and north of the South China Block. Westward drainage expansion is likely impacted by the uplift of the Tibetan Plateau.