ALBERT — All Library Books, journals and Electronic Records Telegrafenberg

1

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Cross-chapter Box on heat stress and heat waves (2014)

Olsson, Lennart ; Chadee, Dave ; Hoegh-Guldberg, Ove ; [weitere]

Cambridge University Press

In: EPIC3Climate Change 2014: Impacts, Adaptation, and Vulnerability. Part A: Global and Sectoral Aspects. Contribution of Working Group II to the Fifth Assessment Report of the Intergovernmental Panel on Climate Change, Cambridge, United Kingdom and New York, NY, USA, Cambridge University Press, pp. 109-111, ISBN: 9781107641655

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Publikationsdatum: 2015-03-08

Repository-Name: EPIC Alfred Wegener Institut

Materialart: Inbook , peerRev

Format: application/pdf

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Summary for Policymakers (2014)

Field, C. B. ; Barros, V. R. ; Mastrandrea, M. D. ; [weitere]

Cambridge University Press

In: EPIC3Climate Change 2014: Impacts, Adaptation, and Vulnerability. Part A: Global and Sectoral Aspects. Contribution of Working Group II to the Fifth Assessment Report of the Intergovernmental Panel on Climate Change, Cambridge, United Kingdom and New York, NY, USA, Cambridge University Press, pp. 1-32, ISBN: 9781107641655

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Publikationsdatum: 2015-03-08

Repository-Name: EPIC Alfred Wegener Institut

Materialart: Inbook , peerRev

Format: application/pdf

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The Stability of Silver Nanoparticles in a Model of Pulmonary Surfactant (2013)

Bey Fen Leo, Shu Chen, Yoshihiko Kyo, Karla-Luise Herpoldt, Nicholas J. Terrill, Iain E. Dunlop, David S. McPhail, Milo S. Shaffer, Stephan Schwander, Andrew Gow, Junfeng Zhang, Kian Fan Chung, Teresa D. Tetley, Alexandra E. Porter and Mary P. Ryan

American Chemical Society (ACS)

In: Environmental Science & Technology

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Publikationsdatum: 2013-09-19

Beschreibung: Environmental Science & Technology DOI: 10.1021/es403377p

Print ISSN: 0013-936X

Digitale ISSN: 1520-5851

Thema: Chemie und Pharmazie , Energietechnik

Publiziert von American Chemical Society (ACS)

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4

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A Perspective on Free Radical Autoxidation: The Physical Organic Chemistry of Polyunsaturated Fatty Acid and Sterol Peroxidation (2013)

Ned A. Porter

American Chemical Society (ACS)

In: Journal of Organic Chemistry

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Publikationsdatum: 2013-04-10

Beschreibung: The Journal of Organic Chemistry DOI: 10.1021/jo4001433

Print ISSN: 0022-3263

Digitale ISSN: 1520-6904

Thema: Chemie und Pharmazie

Publiziert von American Chemical Society (ACS)

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5

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Shape-Control and Electrocatalytic Activity-Enhancement of Pt-Based Bimetallic Nanocrystals (2013)

Nathan S. Porter, Hong Wu, Zewei Quan and Jiye Fang

American Chemical Society (ACS)

In: Accounts of Chemical Research

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Publikationsdatum: 2013-03-06

Beschreibung: Accounts of Chemical Research DOI: 10.1021/ar3002238

Print ISSN: 0001-4842

Digitale ISSN: 1520-4898

Thema: Chemie und Pharmazie

Publiziert von American Chemical Society (ACS)

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6

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Optical Scattering Artifacts Observed in the Development of Multiplexed Surface Enhanced Raman Spectroscopy Nanotag Immunoassays (2012)

J. Noble, S. Attree, A. Horgan, A. Knight, N. Kumarswami, R. Porter and G. Worsley

American Chemical Society (ACS)

In: Analytical Chemistry

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Publikationsdatum: 2012-09-23

Beschreibung: Analytical Chemistry DOI: 10.1021/ac301566k

Print ISSN: 0003-2700

Digitale ISSN: 1520-6882

Thema: Chemie und Pharmazie

Publiziert von American Chemical Society (ACS)

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7

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MaSC: mappability-sensitive cross-correlation for estimating mean fragment length of single-end short-read sequencing data (2013)

Ramachandran, P., Palidwor, G. A., Porter, C. J., Perkins, T. J.

Oxford University Press

In: Bioinformatics

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Publikationsdatum: 2013-02-13

Beschreibung: Motivation: Reliable estimation of the mean fragment length for next-generation short-read sequencing data is an important step in next-generation sequencing analysis pipelines, most notably because of its impact on the accuracy of the enriched regions identified by peak-calling algorithms. Although many peak-calling algorithms include a fragment-length estimation subroutine, the problem has not been adequately solved, as demonstrated by the variability of the estimates returned by different algorithms. Results: In this article, we investigate the use of strand cross-correlation to estimate mean fragment length of single-end data and show that traditional estimation approaches have mixed reliability. We observe that the mappability of different parts of the genome can introduce an artificial bias into cross-correlation computations, resulting in incorrect fragment-length estimates. We propose a new approach, called mappability-sensitive cross-correlation (MaSC), which removes this bias and allows for accurate and reliable fragment-length estimation. We analyze the computational complexity of this approach, and evaluate its performance on a test suite of NGS datasets, demonstrating its superiority to traditional cross-correlation analysis. Availability: An open-source Perl implementation of our approach is available at http://www.perkinslab.ca/Software.html . Contact: tperkins@ohri.ca Supplementary information: Supplementary data are available at Bioinformatics online.

Print ISSN: 1367-4803

Digitale ISSN: 1460-2059

Thema: Biologie , Informatik , Medizin

Publiziert von Oxford University Press

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8

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Considering the Air Quality Impacts of Bioenergy Crop Production: A Case Study Involving Arundo donax (2012)

William C. Porter, Kelley C. Barsanti, Eowyn C. Baughman and Todd N. Rosenstiel

American Chemical Society (ACS)

In: Environmental Science & Technology

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Publikationsdatum: 2012-08-24

Beschreibung: Environmental Science & Technology DOI: 10.1021/es3013084

Print ISSN: 0013-936X

Digitale ISSN: 1520-5851

Thema: Chemie und Pharmazie , Energietechnik

Publiziert von American Chemical Society (ACS)

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9

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Reversible Kirkwood–Alder Transition Observed in Pt3Cu2 Nanoctahedron Assemblies under Controlled Solvent Annealing/Drying Conditions (2012)

Jun Zhang, Zhiping Luo, Benjamin Martens, Zewei Quan, Amar Kumbhar, Nathan Porter, Yuxuan Wang, Detlef-M. Smilgies and Jiye Fang

American Chemical Society (ACS)

In: Journal of the American Chemical Society

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Publikationsdatum: 2012-08-18

Beschreibung: Journal of the American Chemical Society DOI: 10.1021/ja304108n

Print ISSN: 0002-7863

Digitale ISSN: 1520-5126

Thema: Chemie und Pharmazie

Publiziert von American Chemical Society (ACS)

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10

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Sequence requirements for RNA binding by HuR and AUF1 (2012)

Barker, A., Epis, M. R., Porter, C. J., Hopkins, B. R., Wilce, M. C. J., Wilce, J. A., Giles, K. M., Leedman, P. J.

Oxford University Press

In: Journal of Biochemistry

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Publikationsdatum: 2012-04-25

Beschreibung: The stability of RNAs bearing AU-rich elements in their 3'-UTRs, and thus the level of expression of their protein products, is regulated by interactions with cytoplasmic RNA-binding proteins. Binding by HuR generally leads to mRNA stabilization and increased protein production, whereas binding by AUF1 isoforms generally lead to rapid degradation of the mRNA and reduced protein production. The exact nature of the interplay between these and other RNA-binding proteins remains unclear, although recent studies have shown close interactions between them and even suggested competition between the two for binding to their cognate recognition sequences. Other recent reports have suggested that the sequences recognized by the two proteins are different. We therefore performed a detailed in vitro analysis of the binding site(s) for HuR and AUF1 present in androgen receptor mRNA to define their exact target sequences, and show that the same sequence is contacted by both proteins. Furthermore, we analysed a proposed HuR target within the 3'-UTR of MTA1 mRNA, and show that the contacted bases lie outside of the postulated motif and are a better match to a classical ARE than the postulated motif. The defining features of these HuR binding sites are their U-richness and single strandedness.

Print ISSN: 0021-924X

Digitale ISSN: 1756-2651

Thema: Biologie , Chemie und Pharmazie

Publiziert von Oxford University Press im Namen von The Japanese Biochemical Society (JBS).

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