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  • 1
    ISSN: 1365-2486
    Quelle: Blackwell Publishing Journal Backfiles 1879-2005
    Thema: Biologie , Energietechnik , Geographie
    Notizen: Ecosystem processes are important determinants of the biogeochemistry of the ocean, and they can be profoundly affected by changes in climate. Ocean models currently express ecosystem processes through empirically derived parameterizations that tightly link key geochemical tracers to ocean physics. The explicit inclusion of ecosystem processes in models will permit ecological changes to be taken into account, and will allow us to address several important questions, including the causes of observed glacial–interglacial changes in atmospheric trace gases and aerosols, and how the oceanic uptake of CO2 is likely to change in the future. There is an urgent need to assess our mechanistic understanding of the environmental factors that exert control over marine ecosystems, and to represent their natural complexity based on theoretical understanding. We present a prototype design for a Dynamic Green Ocean Model (DGOM) based on the identification of (a) key plankton functional types that need to be simulated explicitly to capture important biogeochemical processes in the ocean; (b) key processes controlling the growth and mortality of these functional types and hence their interactions; and (c) sources of information necessary to parameterize each of these processes within a modeling framework. We also develop a strategy for model evaluation, based on simulation of both past and present mean state and variability, and identify potential sources of validation data for each. Finally, we present a DGOM-based strategy for addressing key questions in ocean biogeochemistry. This paper thus presents ongoing work in ocean biogeochemical modeling, which, it is hoped will motivate international collaborations to improve our understanding of the role of the ocean in the climate system.
    Materialart: Digitale Medien
    Standort Signatur Erwartet Verfügbarkeit
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  • 2
    facet.materialart.
    Unbekannt
    PANGAEA
    In:  Supplement to: Ploug, Helle; Iversen, Morten Hvitfeldt; Koski, Marja Kaarina; Buitenhuis, Erik Theodoor (2008): Production, oxygen respiration rates, and sinking velocity of copepod fecal pellets: direct measurements of ballasting by opal and calcite. Limnology and Oceanography, 53(2), 469-476, https://doi.org/10.4319/lo.2008.53.2.0469
    Publikationsdatum: 2023-03-03
    Beschreibung: Production, oxygen uptake, and sinking velocity of copepod fecal pellets egested by Temora longicornis were measured using a nanoflagellate (Rhodomonas sp.), a diatom (Thalassiosira weissflogii), or a coccolithophorid (Emiliania huxleyi) as food sources. Fecal pellet production varied between 0.8 pellets ind**-1 h**-1 and 3.8 pellets ind**-1 h**-1 and was significantly higher with T. weissflogii than with the other food sources. Average pellet size varied between 2.2 x 10**5 µm**3 and 10.0 x 10**5 µm**3. Using an oxygen microsensor, small-scale oxygen fluxes and microbial respiration rates were measured directly with a spatial resolution of 2 µm at the interface of copepod fecal pellets and the surrounding water. Averaged volume-specific respiration rates were 4.12 fmol O2 µm**-3 d**-1, 2.86 fmol O2 µm**-3 d**-1, and 0.73 fmol O2 µm**-3 d**-1 in pellets produced on Rhodomonas sp., T. weissflogii, and E. huxleyi, respectively. The average carbon-specific respiration rate was 0.15 d**-1 independent on diet (range: 0.08-0.21 d**-1). Because of ballasting of opal and calcite, sinking velocities were significantly higher for pellets produced on T. weissflogii (322 +- 169 m d**-1) and E. huxleyi (200 +- 93 m d**-1) than on Rhodomonas sp. (35 +- 29 m d**-1). Preservation of carbon was estimated to be approximately 10-fold higher in fecal pellets produced when T. longicornis was fed E. huxleyi or T. weissflogii rather than Rhodomonas sp. Our study directly demonstrates that ballast increases the sinking rate of freshly produced copepod fecal pellets but does not protect them from decomposition.
    Schlagwort(e): Center for Marine Environmental Sciences; Dogger-Bank_082003; Doggerbank, German Bight, North Sea; MARUM; PLA; Plankton net
    Materialart: Dataset
    Format: application/zip, 3 datasets
    Standort Signatur Erwartet Verfügbarkeit
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  • 3
    Publikationsdatum: 2023-03-27
    Beschreibung: The smallest marine phytoplankton, collectively termed picophytoplankton, have been routinely enumerated by flow cytometry since the late 1980s, during cruises throughout most of the world ocean. We compiled a database of 40,946 data points, with separate abundance entries for Prochlorococcus, Synechococcus and picoeukaryotes. We use average conversion factors for each of the three groups to convert the abundance data to carbon biomass. After gridding with 1° spacing, the database covers 2.4% of the ocean surface area, with the best data coverage in the North Atlantic, the South Pacific and North Indian basins. The average picophytoplankton biomass is 12 ± 22 µg C L-1 or 1.9 g C m-2. We estimate a total global picophytoplankton biomass, excluding N2-fixers, of 0.53 - 0.74 Pg C (17 - 39 % Prochlorococcus, 12 - 15 % Synechococcus and 49 - 69 % picoeukaryotes). Future efforts in this area of research should focus on reporting calibrated cell size, and collecting data in undersampled regions.
    Schlagwort(e): MAREMIP; MARine Ecosystem Model Intercomparison Project
    Materialart: Dataset
    Format: application/zip, 6.6 MBytes
    Standort Signatur Erwartet Verfügbarkeit
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  • 4
    Publikationsdatum: 2023-03-27
    Beschreibung: We compiled a database of bacterial abundance of 39 766 data points. After gridding with 1° spacing, the database covers 1.3% of the ocean surface. There is data covering all ocean basins and depth except the Southern Hemisphere below 350 m or from April until June. The average bacterial biomass is 3.9 ± 3.6 µg l-1 with a 20-fold decrease between the surface and the deep sea. We estimate a total ocean inventory of about 1.3 - 1029 bacteria. Using an average of published open ocean measurements for the conversion from abundance to carbon biomass of 9.1 fg cell-1, we calculate a bacterial carbon inventory of about 1.2 Pg C. The main source of uncertainty in this inventory is the conversion factor from abundance to biomass.
    Schlagwort(e): MAREMIP; MARine Ecosystem Model Intercomparison Project
    Materialart: Dataset
    Format: application/zip, 5.2 MBytes
    Standort Signatur Erwartet Verfügbarkeit
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  • 5
    facet.materialart.
    Unbekannt
    PANGAEA
    In:  Supplement to: Hauck, Judith; Völker, Christoph; Wolf-Gladrow, Dieter A; Laufkötter, Charlotte; Vogt, Meike; Aumont, Olivier; Bopp, Laurent; Buitenhuis, Erik Theodoor; Doney, Scott C; Dunne, John; Gruber, Nicolas; Hashioka, Taketo; John, Jasmin; Le Quéré, Corinne; Lima, Ivan D; Nakano, Hideyuki; Séférian, Roland; Totterdell, Ian J (2015): On the Southern Ocean CO2 uptake and the role of the biological carbon pump in the 21st century. Global Biogeochemical Cycles, 29(9), 1451-1470, https://doi.org/10.1002/2015GB005140
    Publikationsdatum: 2023-01-13
    Beschreibung: We use a suite of eight ocean biogeochemical/ecological general circulation models from the MAREMIP and CMIP5 archives to explore the relative roles of changes in winds (positive trend of Southern Annular Mode, SAM) and in warming- and freshening-driven trends of upper ocean stratification in altering export production and CO2 uptake in the Southern Ocean at the end of the 21st century. The investigated models simulate a broad range of responses to climate change, with no agreement ona dominance of either the SAM or the warming signal south of 44° S. In the southernmost zone, i.e., south of 58° S, they concur on an increase of biological export production, while between 44 and 58° S the models lack consensus on the sign of change in export. Yet, in both regions, the models show an enhanced CO2 uptake during spring and summer. This is due to a larger CO 2 (aq) drawdown by the same amount of summer export production at a higher Revelle factor at the end of the 21st century. This strongly increases the importance of the biological carbon pump in the entire Southern Ocean. In the temperate zone, between 30 and 44° S all models show a predominance of the warming signal and a nutrient-driven reduction of export production. As a consequence, the share of the regions south of 44° S to the total uptake of the Southern Ocean south of 30° S is projected to increase at the end of the 21st century from 47 to 66% with a commensurable decrease to the north. Despite this major reorganization of the meridional distribution of the major regions of uptake, the total uptake increases largely in line with the rising atmospheric CO2. Simulations with the MITgcm-REcoM2 model show that this is mostly driven by the strong increase of atmospheric CO2, with the climate-driven changes of natural CO2 exchange offsetting that trend only to a limited degree (~10%) and with negligible impact of climate effects on anthropogenic CO2 uptake when integrated over a full annual cycle south of 30° S.
    Schlagwort(e): File content; Uniform resource locator/link to file; Uniform resource locator/link to image
    Materialart: Dataset
    Format: text/tab-separated-values, 27 data points
    Standort Signatur Erwartet Verfügbarkeit
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  • 6
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    Unbekannt
    PANGAEA
    In:  Supplement to: Brun, Philipp; Vogt, Meike; Payne, Mark R; Gruber, Nicolas; O'Brien, Colleen J; Buitenhuis, Erik Theodoor; Le Quéré, Corinne; Leblanc, Karine; Luo, Ya-Wei (2015): Ecological niches of open ocean phytoplankton taxa. Limnology and Oceanography, 60(3), 1020-1038, https://doi.org/10.1002/lno.10074
    Publikationsdatum: 2023-05-12
    Beschreibung: This data contains realized ecological niche estimates of phytoplankton taxa within the mixed layer of the open ocean. The estimates are based on data from the MARine Ecosystem DATa (MAREDAT) initiative, and cover five phytoplankton functional types: coccolithophores (40 species), diatoms (87 species), diazotrophs (two genera), Phaeocystis (two species) and picophytoplankton (two genera). Considered as major niche dimensions were temperature (°C), mixed layer depth (MLD; m), nitrate concentration (µmoles/L), mean photosynthetically active radiation in the mixed layer (MLPAR; µmoles/m**2/s), salinity, and the excess of phosphate versus nitrate relative to the Redfield ratio (P*; µmoles/L). For each niche dimension at a time, conditions at presence locations of the taxa were contrasted with conditions in 12 000 randomly sampled points from the open ocean using MaxEnt models. We used the quartiles of the response curves of these models to parameterize realized niche centers and niche breadths: the median (q50) of the response curves was considered to be the niche center and the distance between the lower quartile (q25) and the upper quartile (q75) was used as a rough estimate of niche breadth. We only reported meaningful niche estimates, i.e., estimates based on MaxEnt models that perform significantly better than random, as indicated by an area under the curve (AUC) score significantly larger than 0.5.
    Materialart: Dataset
    Format: application/zip, 14.2 kBytes
    Standort Signatur Erwartet Verfügbarkeit
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  • 7
    Publikationsdatum: 2023-07-05
    Materialart: Dataset
    Format: application/zip, 2.1 MBytes
    Standort Signatur Erwartet Verfügbarkeit
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  • 8
    Publikationsdatum: 2024-02-01
    Schlagwort(e): Ammonium; Arabian Sea; Auto-analyzer, Technicon Traacs 800; Bacteria; Bacteria, biomass as carbon; Bottle number; Calculated; Carbon, inorganic, total; Chlorophyll a; Ciliates, heterotrophic, biomass as carbon; CTD; CTD/Rosette; CTD-RO; CTD with attached oxygen sensor; Date/Time of event; Density, sigma-theta (0); DEPTH, water; Dinoflagellates, heterotrophic, biomass as carbon; Elevation of event; Event label; Gulf of Aden; Indian Ocean; JGOFS; Joint Global Ocean Flux Study; Latitude of event; Longitude of event; Nanoflagellates, heterotrophic, biomass as carbon; Netherlands Indian Ocean Programme; NIOP; NIOP-B1; NIOP-B1_206-3; NIOP-B1_209-1; NIOP-B1_209-14; NIOP-B1_209-4; NIOP-B1_209-9; NIOP-B1_210-2; NIOP-B1_214-1; NIOP-B1_214-14; NIOP-B1_214-9; NIOP-B1_221-1; NIOP-B1_221-14; NIOP-B1_221-7; NIOP-B1_221-9; NIOP-B1_230-1; NIOP-B1_230-23; NIOP-B1_230-9; NIOP-B1_236-1; NIOP-B1_236-4; NIOP-B1_240-1; NIOP-B1_240-14; NIOP-B1_240-4; NIOP-B1_240-9; NIOP-B1_251-2; NIOP-B1_253-1; NIOP-B1_257-1; NIOP-B1_264-1; NIOP-B1_264-14; NIOP-B1_264-9; NIOP-B1_265-2; NIOP-B1_271-2; NIOP-B1_274-3; NIOP-B1_276-1; NIOP-B1_276-4; NIOP-B1_276-9; NIOP-B1_282-1; Nitrate; Nitrite; Oxygen; Phosphate; Pressure, water; Red Sea; Salinity; Silicate; Spectrophotometry; Temperature, water; Temperature, water, potential; Tyro
    Materialart: Dataset
    Format: text/tab-separated-values, 6531 data points
    Standort Signatur Erwartet Verfügbarkeit
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  • 9
    Publikationsdatum: 2024-02-01
    Schlagwort(e): Ammonium; Arabian Sea; Auto-analyzer, Technicon Traacs 800; Bottle number; Calculated; Carbon, inorganic, total; Chlorophyll a; Ciliates, heterotrophic, biomass as carbon; CTD; CTD/Rosette; CTD-RO; CTD with attached oxygen sensor; Date/Time of event; Density, sigma-theta (0); DEPTH, water; Dinoflagellates, heterotrophic, biomass as carbon; Elevation of event; Event label; Gulf of Aden; Indian Ocean; JGOFS; Joint Global Ocean Flux Study; Latitude of event; Longitude of event; Nanoflagellates, heterotrophic, biomass as carbon; Netherlands Indian Ocean Programme; NIOP; NIOP-B2; NIOP-B2_805-7; NIOP-B2_806-1; NIOP-B2_807-3; NIOP-B2_809-1; NIOP-B2_809-16; NIOP-B2_809-27; NIOP-B2_809-32; NIOP-B2_809-35; NIOP-B2_809-4; NIOP-B2_813-1; NIOP-B2_813-13; NIOP-B2_813-4; NIOP-B2_816-1; NIOP-B2_817-3; NIOP-B2_818-16; NIOP-B2_818-22; NIOP-B2_818-5; NIOP-B2_818-8; NIOP-B2_819-1; NIOP-B2_820-1; NIOP-B2_820-15; NIOP-B2_820-4; NIOP-B2_820-9; NIOP-B2_821-1; NIOP-B2_822-2; NIOP-B2_826-14; NIOP-B2_826-3; NIOP-B2_826-4; NIOP-B2_826-9; NIOP-B2_832-11; NIOP-B2_832-16; NIOP-B2_832-24; NIOP-B2_832-29; NIOP-B2_832-7; NIOP-B2_833-3; NIOP-B2_836-4; NIOP-B2_838-1; NIOP-B2_840-1; NIOP-B2_840-4; NIOP-B2_840-9; NIOP-B2_842-12; NIOP-B2_842-15; NIOP-B2_842-3; NIOP-B2_842-7; Nitrate; Nitrite; Oxygen; Phosphate; Pressure, water; Red Sea; Salinity; Silicate; Spectrophotometry; Temperature, water; Temperature, water, potential; Tyro
    Materialart: Dataset
    Format: text/tab-separated-values, 9561 data points
    Standort Signatur Erwartet Verfügbarkeit
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  • 10
    Publikationsdatum: 2024-04-02
    Beschreibung: Microzooplankton database. Originally published in: Buitenhuis, Erik, Richard Rivkin, Sévrine Sailley, Corinne Le Quéré (2010) Biogeochemical fluxes through microzooplankton. Global Biogeochemical Cycles Vol. 24, GB4015, doi:10.1029/2009GB003601 This new version has had some mistakes corrected.
    Schlagwort(e): MAREMIP; MARine Ecosystem Model Intercomparison Project
    Materialart: Dataset
    Format: application/zip, 4 MBytes
    Standort Signatur Erwartet Verfügbarkeit
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