ALBERT

Description: We used a molecular phylogenetic approach to investigate species delimitation and diversification in the northeastern Atlantic and Mediterranean musseldrills of the Ocinebrina aciculata complex, based on molecular data from topotypical material of many of the nominal taxa. The complex is shown to consist of at least five species: Ocinebrina aciculata (Lamarck, 1822) from the Atlantic and western Mediterranean; O. cf. corallina (Scacchi, 1836) from the central Mediterranean Sea; O. reinai Bonomolo & Crocetta, 2012 from the Tyrrhenian Sea; O. corallinoides Pallary, 1912 from the Gulf of Gabès; and O. aegeensis n. sp. currently known from the Aegean Sea only. The new species is differentiated from the other taxa by very subtle morphological diagnostic features, although it is clearly identified by genetic distance and apomorphic DNA-sequence characters. The identity of Murex corallinus Scacchi, 1836 (type species of Ocinebrina Jousseaume, 1880) could not be defined with certainty, pending genetic comparison of specimens of the â €? large Tyrrhenian morphotype' (corresponding to the neotype, but not assayed herein) with the assayed â €? small morphotype'.

Description: The genus Ulva is has broadly negative connotations because of its ability to form harmful “green tides” and the problems it causes with precise species identification, due to its morphological plasticity. During recent years, tides of unattached Ulva compressa U. Linneus 1753 with an atypical sheet-like morphology were for the first time observed in the German Baltic. Here we report that this nuisance alga is conspecific with the type strain of U. mutabilis Föyn 1958 from Faro in Portugal, an important model organism to study morphogenesis, morphogenetics and mutualistic interactions. Different approaches were used to examine conspecificity: (1) Comparisons on vegetative and reproductive features of cultured material of Ulva mutabilis and German Ulva compressa resulted in congruent results proving that a certain morphogenetic mutation pattern is shared. Spontaneous mutations of “slender-like” thalli are appearing whilst the common form exhibits a “leaf-like” wildtype morphology. (2) Interbreeding experiments of gametes of Ulva compressa and Ulva mutabilis were successful and showed a fertile first-generation offspring exhibiting the typical wildtype morphology similar to the phenotype of the parental generation. (3) Phylogenetic and species delimitation analyses were carried out on 128 tufA sequences of Ulva compressa specimens sampled in 2014–2016 in Germany and on tufA sequences of two clones of the strains Ulva mutabilis (sl-G[mt+]) and Ulva mutabilis (wt-[mt-]) to identify Molecular Operational Taxonomic Units (MOTUs). The Generalized Mixed Yule-Coalescent (GMYC) method comprises one major MOTU containing all included sequences of Ulva compressa and Ulva mutabilis, while reference sequences included in the analysis clustered outside this MOTU. This highly supports the monophyly of Ulva compressa and Ulva mutabilis, which can be treated as the same species. As a consequence, U. mutabilis is also a suitable model for future studies of green tides and their molecular and morphogenetic basis in the Baltic Sea.

Description: Sequence-based specimen identification, known as DNA barcoding, is a common method complementing traditional morphology-based taxonomic assignments. The fundamental resource in DNA barcoding is the availability of a taxonomically reliable sequence database to use as a reference for sequence comparisons. Here, we provide a reference library including 579 sequences of the mitochondrial cytochrome c oxidase subunit I for 113 North Sea mollusc species. We tested the efficacy of this library by simulating a sequence-based specimen identification scenario using Best Match, Best Close Match (BCM) and All Species Barcode (ASB) criteria with three different threshold values. Each identification result was compared with our prior morphology-based taxonomic assignments. Our simulation resulted in 87.7% congruent identifications (93.8% when excluding singletons). The highest number of congruent identifications was obtained with BCM and ASB and a 0.05 threshold. We also compared identifications with genetic clustering (Barcode Index Numbers, BINs) computed by the Barcode of Life Datasystem (BOLD). About 68% of our morphological identifications were congruent with BINs created by BOLD. Forty-nine sequences were clustered in 16 discordant BINs, and these were divided in two classes: sequences from different species clustered in a single BIN and conspecific sequences divided in more BINs. Whereas former incongruences were probably caused by BOLD entries in need of a taxonomic update, the latter incongruences regarded taxa requiring further investigations. These include species with amphi-Atlantic distribution, whose genetic structure should be evaluated over their entire range to produce a reliable sequence-based identification system.

Description: We investigated the relationships of the muricid subfamilies Haustrinae, Pagodulinae and the genus Poirieria using a molecular phylogenetic approach on a dataset of three mitochondrial genes (12S, 16S and COI). These taxa form a well-supported clade within Muricidae. The phylogenetic analysis suggests that Poirieria is the sister group of Pagodulinae and that Axymene, Comptella, Pagodula, Paratrophon, Trophonella, Trophonopsis, Xymene, Xymenella, Xymenopsis and Zeatrophon are all worthy of genus-level rank within this subfamily. We propose the use of Enixotrophon for a group of species currently classified in Pagodula. The results also support a new taxonomic arrangement in Haustrinae.

Description: Background: During the last years, the effectiveness of DNA barcoding for animal species identification has been proven in many studies, analyzing both vertebrate and invertebrate taxa. In terms of marine organisms, however, most barcoding studies typically focus on economically relevant species, for example, fish, as well asonthedocumentationof hotspots of species diversity, for example, tropical coral reefs or regions of the almost unexplored deep sea regions. In contrast to this, species diversity of “well-known” habitats is nearly neglected. As part of our running project we started to build up a comprehensive DNA barcode library for the metazoan taxa of the North Sea, one of the most extensively studied ecosystems of the world. The North Sea is characterized by a highamountof anthropogenic pressure such as intensive fishing and ship traffic as well as offshore installations. Environmental parameters (e.g., depth, sediment characteristics, temperature, and salinity) of this semi-enclosed shelf sea follow a distinct pattern: high seasonal fluctuations can be observed in southern areas, but low fluctuations are given in the northern regions. This heterogeneity is also displayed in macrobenthic community structures, with a lower number of species in the shallow southern parts (i.e., the German Bight) and more species in the central and northern North Sea. In addition to this, species with a typical Mediterranean-Lusitanean distribution are also known to occur in parts of the North Sea where oceanic influences prevail. Results: Our barcode library includes a broad variety of taxa, including typical taxa of marine barcoding studies, for example, fish or decapod crustaceans. Our on-growing library also includes groups that are often ignored as cnidarians, parasitic crustaceans, echinoderms, mollusks, pantopods, polychaets, and others. In total, our library includes more than 4200 DNA barcodes of more than 600 species at the moment. By using the Barcode of Life Data Systems (BOLD), unique BINs were identified for more than 90% of the analyzed species. Significance: Our data represent a first step towards the establishment of a comprehensive DNA barcode library of the Metazoa of the North Sea. Despite the fact that various taxa are still missing or are currently underrepresented, our results clearly underline the usefulness of DNA barcodes to discriminate the vast majority of the analyzed species. It should be also kept in mind that the benefits of DNA barcoding are not restricted to taxonomic or systematic research only. The rise of modern high-throughput sequencing technologies will change biomonitoring applications and surveys significantly in the coming years. Following this, reference datasets such as ours will become essential for a correct identification of specimens sequenced as part of a metabarcoding study. This is especially true for the North Sea, a marine region that has been massively affected by cargo ship traffic, the exploitation of oil and gas resources, offshore wind parks, and in particular extensive long-term fisheries.

Description: During the last years DNA barcoding has become a popular method of choice for molecular specimen identification. Here we present a comprehensive DNA barcode library of various crustacean taxa found in the North Sea, one of the most extensively studied marine regions of the world. Our data set includes 1,332 barcodes covering 205 species, including taxa of the Amphipoda, Copepoda, Decapoda, Isopoda, Thecostraca, and others. This dataset represents the most extensive DNA barcode library of the Crustacea in terms of species number to date. By using the Barcode of Life Data Systems (BOLD), unique BINs were identified for 198 (96.6%) of the analyzed species. Six species were characterized by two BINs (2.9%), and three BINs were found for the amphipod species Gammarus salinus Spooner, 1947 (0.4%). Intraspecific distances with values higher than 2.2% were revealed for 13 species (6.3%). Exceptionally high distances of up to 14.87% between two distinct but monophyletic clusters were found for the parasitic copepod Caligus elongatus Nordmann, 1832, supporting the results of previous studies that indicated the existence of an overlooked sea louse species. In contrast to these high distances, haplotype-sharing was observed for two decapod spider crab species, Macropodia parva Van Noort & Adema, 1985 and Macropodia rostrata (Linnaeus, 1761), underlining the need for a taxonomic revision of both species. Summarizing the results, our study confirms the application of DNA barcodes as highly effective identification system for the analyzed marine crustaceans of the North Sea and represents an important milestone for modern biodiversity assessment studies using barcode sequences

Description: The Southern Ocean ecosystem at the Antarctic Peninsula has steep natural environmental gradients, e.g. in terms of water masses and ice cover, and experiences regional above global average climate change. An ecological macroepibenthic survey was conducted in three ecoregions in the north-western Weddell Sea, on the continental shelf of the Antarctic Peninsula in the Bransfield Strait and on the shelf of the South Shetland Islands in the Drake Passage, defined by their environmental envelop. The aim was to improve the so far poor knowledge of the structure of this component of the Southern Ocean ecosystem and its ecological driving forces. It can also provide a baseline to assess the impact of ongoing climate change to the benthic diversity, functioning and ecosystem services. Different intermediate-scaled topographic features such as canyon systems including the corresponding topographically defined habitats ‘bank’, ‘upper slope’, ‘slope’ and ‘canyon/deep’ were sampled. In addition, the physical and biological environmental factors such as sea-ice cover, chlorophyll-a concentration, small-scale bottom topography and water masses were analysed. Catches by Agassiz trawl showed high among-station variability in biomass of 96 higher systematic groups including ecological key taxa. Large-scale patterns separating the three ecoregions from each other could be correlated with the two environmental factors, sea-ice and depth. Attribution to habitats only poorly explained benthic composition, and small-scale bottom topography did not explain such patterns at all. The large-scale factors, sea-ice and depth, might have caused large-scale differences in pelagic benthic coupling, whilst small-scale variability, also affecting larger scales, seemed to be predominantly driven by unknown physical drivers or biological interactions.

Description: Jaminia quadridens (Mollusca: Gastropoda: Heterobranchia: Pulmonata: Stylommatophora: Enidae) is a land snail living up to 2400 m above sea level on calcareous meadow slopes. It is widely distributed in Central and Southern Europe, with two subspecies currently recognised (J. quadridens quadridens and J. quadridens elongata). Like other Enidae, the genus Jaminia is sinistrally coiled, whilst the vast majority of gastropods are dextral. Chirality in snails is determined in the early embryonic stages by a single gene with maternal effect. Following the discovery of reversed (dextral) populations in Abruzzi, we investigated the genetic variability of Jaminia quadridens in central and southern Italy. In fact, reversal of chirality is often associated with extremely rapid speciation in snails (“single gene speciation”), as gene flow between opposite chiral morphs can be severely reduced by pre-copula isolation mechanisms. Phylogenetic analyses with different inference methods, haplotype analyses and species delimitation analyses were carried out on cytochtome oxydase subunit I (COI) sequences of 126 Jaminia specimens from central and southern Italy, Sardinia and Provence. Our results suggested a complex framework, with at least five lineages that may represent distinct species, in agreement with biogeographic patterns previously reported for other terrestrial taxa. Southern populations of an ancestral stock probably underwent allopatric speciation while surviving in glacial refugia during the Pleistocene. Colonization of central Italy may be recent, with evidences of current gene flow between populations of a single species, which includes reversed individuals. The appearance of chiral reversal was statistically associated with marginal demes but apparently not related to other biological, ecological or historical factors. As land snails are generally severely affected by habitat degradation, due to their ecological requirements, our results have important implications for conservation. J. quadridens in Italy may comprise a complex of distinct species, mostly with restricted ranges, which may suffer from environmental changes more than a single, widely distributed species would.