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  • 1
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    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi (0031-05850) vol.30 (2013) nr.1 p.94
    Publication Date: 2015-04-20
    Description: Entomophthoromycota is one of six major phylogenetic lineages among the former phylum Zygomycota. These early terrestrial fungi share evolutionarily ancestral characters such as coenocytic mycelium and gametangiogamy as a sexual process resulting in zygospore formation. Previous molecular studies have shown the monophyly of Entomophthoromycota, thus justifying raising the taxonomic status of these fungi to a phylum. Multi-gene phylogenies have identified five major lineages of Entomophthoromycota. In this review we provide a detailed discussion about the biology and taxonomy of these lineages: I) Basidiobolus (Basidiobolomycetes: Basidiobolaceae; primarily saprobic); II) Conidiobolus (Entomophthoromycetes, Ancylistaceae; several clades of saprobes and invertebrate pathogens), as well as three rapidly evolving entomopathogenic lineages in the family Entomophthoraceae centering around; III) Batkoa; IV) Entomophthora and allied genera; and V) the subfamily Erynioideae which includes Zoophthora and allied genera. Molecular phylogenic analysis has recently determined the relationships of several taxa that were previously unresolved based on morphology alone: Eryniopsis, Macrobiotophthora, Massospora, Strongwellsea and two as yet undescribed genera of Basidiobolaceae.
    Keywords: Basidiobolus ; Batkoa ; Bayesian inference (BI) ; Conidiobolus ; Entomophthora ; Entomophthorales ; Entomophthoromycotina ; maximum likelihood (ML) ; phylogeny ; Zoophthora
    Repository Name: National Museum of Natural History, Netherlands
    Type: Article / Letter to the editor
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  • 2
    Publication Date: 2024-01-12
    Description: The Mucorales (Mucoromycotina) are one of the most ancient groups of fungi comprising ubiquitous, mostly saprotrophic organisms. The first comprehensive molecular studies 11 yr ago revealed the traditional classification scheme, mainly based on morphology, as highly artificial. Since then only single clades have been investigated in detail but a robust classification of the higher levels based on DNA data has not been published yet. Therefore we provide a classification based on a phylogenetic analysis of four molecular markers including the large and the small subunit of the ribosomal DNA, the partial actin gene and the partial gene for the translation elongation factor 1-alpha. The dataset comprises 201 isolates in 103 species and represents about one half of the currently accepted species in this order. Previous family concepts are reviewed and the family structure inferred from the multilocus phylogeny is introduced and discussed. Main differences between the current classification and preceding concepts affects the existing families Lichtheimiaceae and Cunninghamellaceae, as well as the genera Backusella and Lentamyces which recently obtained the status of families along with the Rhizopodaceae comprising Rhizopus, Sporodiniella and Syzygites. Compensatory base change analyses in the Lichtheimiaceae confirmed the lower level classification of Lichtheimia and Rhizomucor while genera such as Circinella or Syncephalastrum completely lacked compensatory base changes.
    Keywords: Mucorales ; families ; phylogeny
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 3
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    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 30 no. 1, pp. 94-105
    Publication Date: 2024-01-12
    Description: Entomophthoromycota is one of six major phylogenetic lineages among the former phylum Zygomycota.\nThese early terrestrial fungi share evolutionarily ancestral characters such as coenocytic mycelium and gametangiogamy as a sexual process resulting in zygospore formation. Previous molecular studies have shown the monophyly of Entomophthoromycota, thus justifying raising the taxonomic status of these fungi to a phylum. Multi-gene phylogenies have identified five major lineages of Entomophthoromycota. In this review we provide a detailed discussion about the biology and taxonomy of these lineages: I) Basidiobolus (Basidiobolomycetes: Basidiobolaceae; primarily saprobic); II) Conidiobolus (Entomophthoromycetes, Ancylistaceae; several clades of saprobes and invertebrate pathogens), as well as three rapidly evolving entomopathogenic lineages in the family Entomophthoraceae centering around; III) Batkoa; IV) Entomophthora and allied genera; and V) the subfamily Erynioideae which includes Zoophthora and allied genera. Molecular phylogenic analysis has recently determined the relationships of several taxa that were previously unresolved based on morphology alone: Eryniopsis, Macrobiotophthora, Massospora, Strongwellsea and two as yet undescribed genera of Basidiobolaceae.
    Keywords: Basidiobolus ; Batkoa ; Bayesian inference (BI) ; Conidiobolus ; Entomophthora ; Entomophthorales ; Entomophthoromycotina ; maximum likelihood (ML) ; phylogeny ; Zoophthora
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 4
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 44, pp. 67-97
    Publication Date: 2024-01-12
    Description: Mucor species are common soil fungi but also known as agents of human infections (mucormycosis) \nand used in food production and biotechnology. Mucor circinelloides is the Mucor species that is most frequently \nisolated from clinical sources. The taxonomy of Mucor circinelloides and its close relatives (Mucor circinelloides \ncomplex \xe2\x80\x93 MCC) is still based on morphology and mating behaviour. The aim of the present study was a revised \ntaxonomy of the MCC using a polyphasic approach. Using a set of 100 strains molecular phylogenetic analysis of \nfive markers (ITS, rpb1, tsr1, mcm7, and cfs, introduced here) were performed, combined with phenotypic studies, \nmating tests and the determination of the maximum growth temperatures. The multi-locus analyses revealed 16 \nphylogenetic species of which 14 showed distinct phenotypical traits and were recognised as discrete species. \nFive of these species are introduced as novel taxa: M. amethystinus sp. nov., M. atramentarius sp. nov., M. variicolumellatus sp. nov., M. pseudocircinelloides sp. nov., and M. pseudolusitanicus sp. nov. The former formae of \nM. circinelloides represent one or two separate species. In the MCC, the simple presence of well-shaped zygospores \nonly indicates a close relation of both strains, but not necessarily conspecificity. Seven species of the MCC have \nbeen implemented in human infection: M. circinelloides, M. griseocyanus, M. janssenii, M. lusitanicus, M. ramosissimus, M. variicolumellatus, and M. velutinosus
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; mating tests ; maximum growth temperature ; Mucor ; mucormycosis ; new taxa ; phylogeny ; taxonomy ; zygospore formation
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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