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  • Surface physics, nanoscale physics, low-dimensional systems  (4)
  • gene expression  (2)
  • inbreeding depression  (2)
  • 1
    ISSN: 1573-5028
    Keywords: cucumber ; gene expression ; hydroxypyruvate reductase ; light regulation ; peroxisomal enzymes ; serine:glyoxylate aminotransferase
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The development of peroxisomal enzymes in cotyledons of cucumber seedlings is strongly dependent on light. In light-grown seedlings, activities of two peroxisomal enzymes, hydroxypyruvate reductase (HPR) and serine: glyoxylate aminotransferase (SGAT), were barely detectable until three days postimbibition, after which time both activities increased rapidly and linearly for at least three days. In the dark, the activities of these enzymes increased slightly over the same time period, but only to about 5% to 10% of 7-day light-induced levels. When 51/2-day dark-grown seedlings were transferred into white light, activities of HPR and SGAT began to increase after approximately 8 h. HPR protein was shown by an immunoprecipitation assay to increase concurrently with enzymatic activity in both light- and dark-grown cotyledons. Immunoblotting results suggested that the amounts of SGAT-A and SGAT-B, the two subunits of SGAT, also developed along with SGAT activity. The relative levels of translatable mRNAs encoding HPR, SGAT-A, and SGAT-B were also light-dependent, and increased with a developmental pattern similar to enzyme activity and protein levels in light- and dark-grown cotyledons. In 51/2-day dark-grown cotyledons that were transferred to the light, translatable mRNAs for SGAT-A and SGAT-B began to increase within 1 h of illumination and continued of increase rapidly and linearly for the next 24 h in the light to a new steady-state level that was 45 times that of dark controls. Translatable HPR mRNA exhibited a biphasic pattern of accumulation, with a three-fold increase during the first 6 h of illumination, followed by an additional six-fold increase between 8 and 24 h. The accumulation of translationally active mRNA for both enzymes preceded the accumulation of the corresponding protein and enzyme activity by about 8 h. Our data suggest that the rise in enzyme activity depends on an increase in translatable mRNA for these enzymes and is regulated at a pretranslational level, most likely involving transcription of new mRNA.
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  • 2
    ISSN: 1573-5028
    Keywords: cDNA ; gene expression ; hydroxypyruvate reductase ; light regulation ; peroxisomal enzyme
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A full-length cDNA encoding NADH-dependent hydroxypyruvate reductase (HPR), a photorespiratory enzyme localized in leaf peroxisomes, was isolated from a λgt11 cDNA library made by reverse transcription of poly(A)+ RNA from cucumber cotyledons. In vitro transcription and translation of this clone yielded a major polypeptide which was identical in size, 43 kDA, to the product of in vitro translation of cotyledonary poly(A)+ RNA and subsequent immunoprecipitation with HPR antiserum. Escherichia coli cultures transformed with a plasmid construct containing the cDNA insert were induced to express HPR enzyme activity. RNA blot analysis showed that HPR transcript levels rise significantly in the first eight days of light-grown seedling development. This closely resembles the pattern seen for HPR-specific translatable mRNA. DNA blot analysis indicated that a single HPR gene is likely present per haploid genome. Nucleotide sequence analysis revealed an open reading frame of 1146 bases which encodes a polypeptide with a calculated molecular weight of 41.7 kDa. The derived amino acid sequence from this open reading frame is 26% identical and 50% similar to the amino acid sequence of the E. coli enzyme phosphoglycerate dehydrogenase, which catalyzes a similar reaction and functions in a related pathway. Statistical analyses show that this similarity is significant (z〉10). The derived amino acid sequence for HPR also contains the characteristics of an NAD-binding domain.
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  • 3
    Electronic Resource
    Electronic Resource
    Springer
    Evolutionary ecology 8 (1994), S. 61-69 
    ISSN: 1573-8477
    Keywords: sibmating ; inbreeding depression ; haplodiploid ; inclusive fitness ; one-locus genetic
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary We construct an inclusive fitness model of the relative selective advantage of sibmating and outbreeding behaviour, under the assumption that inbred offspring pay a fitness penalty. We are particularly interested in the question of whether such inbreeding depression is enough to generate a stable phenotypic polymorphism, with both kinds of breeding observed. The model predicts that, under diploidy, such a polymorphism is never found, but under haplodiploidy, it exists for a narrow range of parameter values. The inclusive fitness argument is technically interesting because care must be taken with reproductive values. We also present a corrected version of a one-locus genetic model for sibmating and find that the inclusive fitness and genetic models give identical results when selection is weak.
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  • 4
    Electronic Resource
    Electronic Resource
    Springer
    Evolutionary ecology 6 (1992), S. 312-330 
    ISSN: 1573-8477
    Keywords: genetic models ; inbreeding depression ; mating cost ; Hymenoptera
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary Existing genetic models of the evolution of sibmating behaviour in diploids incorporate inbreeding depression in terms of reduced fecundity of consanguineous mating pairs rather than reduced survival or fecundity of the progeny of such matings. Here we derive a model to correct this deficiency and extend the model to haplodiploids where differential effects of inbreeding in males and females is a crucial consideration. Our analyses indicate that sibmating can readily evolve in both diploids and haplodiploids in which male mating costs and inbreeding depression are reasonably low, provided there is some mechanism to permit sibmating such as siblings being reared in nests or other forms of aggregation. Our analyses also indicate that once sibmating invades, it typically will go to fixation, although sib-/randommating polymorphisms can persist in both diploids and haplodiploids if male mating costs are close to zero and inbreeding depression reduces survival by around one-third. The conditions favouring sibmating are slightly more restrictive in haplodiploids than in diploids. In light of this we may ask why we see intense sibmating in many haplodiploids such as parasitic wasps, fig wasps, ants, bark beetles and mites, and only rarely in diploid animals. The common factor could be certain kinds of aggregation behaviour that are a prerequisite for sibmating in the absence of kin recognition. Another possibility is that inbreeding depression is likely to be more severe in diploids than in haplodiploids because deleterious recessives are purged from haplodiploid populations when expressed by haploid males. Thus, lower levels of inbreeding depression might be one important reason why sibmating appears to arise more frequently in haplodiploids than diploids. Phylogenetic analysis of groups, such as bark beetles and mites, exhibiting both diploid and haplodiploid populations may be useful in elucidating the relative importance of gregarious behaviour and haplodiploidy in facilitating sibmating systems.
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  • 5
    Publication Date: 2015-08-20
    Description: Author(s): Wayne M. Witzel, Inès Montaño, Richard P. Muller, and Malcolm S. Carroll We present a strategy for producing multiqubit gates that promise high fidelity with minimal tuning requirements. Our strategy combines gap protection from the adiabatic theorem with dynamical decoupling in a complementary manner. Energy-level transition errors are protected by adiabaticity and rema… [Phys. Rev. B 92, 081407(R)] Published Wed Aug 19, 2015
    Keywords: Surface physics, nanoscale physics, low-dimensional systems
    Print ISSN: 1098-0121
    Electronic ISSN: 1095-3795
    Topics: Physics
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  • 6
    Publication Date: 2012-01-31
    Description: Author(s): Matthew R. Sears and Wayne M. Saslow Recent spin-Seebeck experiments on thin ferromagnetic films apply a temperature difference Δ T x along the length x and measure a (transverse) voltage difference Δ V y along the width y . The connection between these involves: (1) thermal equilibration between sample and substrate, (2) spin currents alon... [Phys. Rev. B 85, 035446] Published Mon Jan 30, 2012
    Keywords: Surface physics, nanoscale physics, low-dimensional systems
    Print ISSN: 1098-0121
    Electronic ISSN: 1095-3795
    Topics: Physics
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  • 7
    Publication Date: 2014-09-26
    Description: Author(s): Wayne M. Witzel, Kevin Young, and Sankar Das Sarma We present a cluster expansion method for approximating quantum spin-bath dynamics in terms of a classical Gaussian stochastic process. The cluster expansion produces the two-point correlation function of the approximate classical bath, permitting rapid evaluation of noise-mitigating quantum control... [Phys. Rev. B 90, 115431] Published Thu Sep 25, 2014
    Keywords: Surface physics, nanoscale physics, low-dimensional systems
    Print ISSN: 1098-0121
    Electronic ISSN: 1095-3795
    Topics: Physics
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  • 8
    Publication Date: 2016-05-03
    Description: Author(s): Maja Krcmar and Wayne M. Saslow The exact solution of the linearized, steady-state transport equation for three-carrier systems, such as can occur for semiconductors and ionic conductors, is constructed starting from the near-equilibrium entropy-production requirements of irreversible thermodynamics. Three characteristic modes are… [Phys. Rev. B 93, 195401] Published Mon May 02, 2016
    Keywords: Surface physics, nanoscale physics, low-dimensional systems
    Print ISSN: 1098-0121
    Electronic ISSN: 1095-3795
    Topics: Physics
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