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  • Molecular electrostatic potentials  (1)
  • binary mixtures  (1)
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  • 1
    Electronic Resource
    Electronic Resource
    Springer
    International journal of thermophysics 21 (2000), S. 703-717 
    ISSN: 1572-9567
    Keywords: binary mixtures ; isoamyl alcohol ; n-butyl acetate ; nonequilibrium molecular dynamics ; shear viscosity ; zero-shear viscosity
    Source: Springer Online Journal Archives 1860-2000
    Topics: Physics
    Notes: Abstract Nonequilibrium, NVT, molecular dynamics (NEMD) simulations were used to obtain the shear viscosity, η, of isoamyl alcohol, n-butyl acetate, and their binary mixtures at 35°C and 0.1 MPa. The fluids were modeled using rigid bonds, rigid bond angles, appropriate torsional potentials, pairwise-additive Lennard–Jones dispersion interactions between united-atom sites, and partial point charges located at atomic centers. Simulations were performed at different shear rates, γ, and values obtained at γ=0 are compared to experimental values. Two methods are commonly used to extrapolate pure-fluid simulated data to zero shear, η(0). The applicability of these two methods to mixtures of polar fluids was examined in this study. It was found that linear extrapolation with respect to γ 1/2 can lead to ambiguous η(0) results for some mixtures because of a curvature in the data that shows no observably distinct change in rheology. On the other hand, a log–log plot of η(γ) versus γ is consistently very linear with a distinct change from shear-thinning to Newtonian rheology at lower shear rates. The latter method is recommended for consistency sake, even though agreement between experiment and η(0) values was better with the former method. This agreement was 12 and 21% for the two methods, respectively. A negative bias in the simulated values is attributable to the united-atom model.
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 1573-4951
    Keywords: Bisphosphonates ; Molecular electrostatic potentials ; Calcium binding
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Summary Molecular electrostatic potentials have been used to model the calcium binding properties of some bisphosphonate drugs, which are used to treat various bone diseases. The mechanism of action involves the binding of bisphosphonates to the bone surface, where calcium plays an important role. Electrostatic potential maps derived from ab initio partial charges have been compared with both the crystal structure and the fully optimized ab initio structure of (dichloro)methylenebisphosphonate-calcium ion complex. Molecular electrostatic potentials can correctly predict the calcium binding geometry of bisphosphonate-type compounds and this type of information can be used in the practical drug design work.
    Type of Medium: Electronic Resource
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