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  • Marine  (1)
  • Microbial Interactions
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  • 1
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    Substrate-controlled succession of marine bacterioplankton populations induced by a phytoplankton bloom (2012)
    American Association for the Advancement of Science (AAAS)
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    Publication Date: 2012-05-05
    Description: Phytoplankton blooms characterize temperate ocean margin zones in spring. We investigated the bacterioplankton response to a diatom bloom in the North Sea and observed a dynamic succession of populations at genus-level resolution. Taxonomically distinct expressions of carbohydrate-active enzymes (transporters; in particular, TonB-dependent transporters) and phosphate acquisition strategies were found, indicating that distinct populations of Bacteroidetes, Gammaproteobacteria, and Alphaproteobacteria are specialized for successive decomposition of algal-derived organic matter. Our results suggest that algal substrate availability provided a series of ecological niches in which specialized populations could bloom. This reveals how planktonic species, despite their seemingly homogeneous habitat, can evade extinction by direct competition.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Teeling, Hanno -- Fuchs, Bernhard M -- Becher, Dorte -- Klockow, Christine -- Gardebrecht, Antje -- Bennke, Christin M -- Kassabgy, Mariette -- Huang, Sixing -- Mann, Alexander J -- Waldmann, Jost -- Weber, Marc -- Klindworth, Anna -- Otto, Andreas -- Lange, Jana -- Bernhardt, Jorg -- Reinsch, Christine -- Hecker, Michael -- Peplies, Jorg -- Bockelmann, Frank D -- Callies, Ulrich -- Gerdts, Gunnar -- Wichels, Antje -- Wiltshire, Karen H -- Glockner, Frank Oliver -- Schweder, Thomas -- Amann, Rudolf -- New York, N.Y. -- Science. 2012 May 4;336(6081):608-11. doi: 10.1126/science.1218344.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Max Planck Institute for Marine Microbiology, Celsiusstrasse 1, 28359 Bremen, Germany.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22556258" target="_blank"〉PubMed〈/a〉
    Keywords: Alphaproteobacteria/enzymology/genetics/*growth & development/metabolism ; Bacterial Proteins/genetics/metabolism ; Bacteroidetes/enzymology/genetics/*growth & development/metabolism ; Diatoms/*growth & development/metabolism ; *Ecosystem ; *Eutrophication ; Gammaproteobacteria/enzymology/genetics/*growth & development/metabolism ; Glycoside Hydrolases/genetics/metabolism ; Membrane Proteins/genetics/metabolism ; Membrane Transport Proteins/genetics/metabolism ; Metagenome ; Microbial Interactions ; North Sea ; Phosphates/metabolism ; Phytoplankton/*growth & development/metabolism ; Seawater/*microbiology ; Sulfatases/genetics/metabolism
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
    Published by American Association for the Advancement of Science (AAAS)
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  • 2
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    The ocean sampling day consortium (2015)
    BioMed Central
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    Publication Date: 2022-10-18
    Description: © The Author(s), 2015. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in GigaScience 4 (2015): 27, doi:10.1186/s13742-015-0066-5.
    Description: Ocean Sampling Day was initiated by the EU-funded Micro B3 (Marine Microbial Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine microbial biodiversity and function of the world’s oceans. It is a simultaneous global mega-sequencing campaign aiming to generate the largest standardized microbial data set in a single day. This will be achievable only through the coordinated efforts of an Ocean Sampling Day Consortium, supportive partnerships and networks between sites. This commentary outlines the establishment, function and aims of the Consortium and describes our vision for a sustainable study of marine microbial communities and their embedded functional traits.
    Description: This work was supported by the Micro B3 project, which is funded from the European Union’s Seventh Framework Programme (FP7; Joint Call OCEAN.2011‐2: Marine microbial diversity – new insights into marine ecosystems functioning and its biotechnological potential) under the grant agreement no 287589.
    Keywords: Ocean sampling day ; OSD ; Biodiversity ; Genomics ; Health index ; Bacteria ; Microorganism ; Metagenomics ; Marine ; Micro B3 ; Standards
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: application/pdf
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    PAPER (OA)
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