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  • 1
    Publication Date: 2011-08-24
    Description: An unidentified filamentous purple bacterium, probably belonging to a new genus or even a new family, is found in close association with the filamentous, mat-forming cyanobacterium Microcoleus chthonoplastes in a hypersaline pond at Guerrero Negro, Baja California Sur, Mexico, and in Solar Lake, Sinai, Egypt. This organism is a gliding, segmented trichome, 0.8-0.9 micrometer wide. It contains intracytoplasmic stacked lamellae which are perpendicular and obliquely oriented to the cell wall, similar to those described for the purple sulfur bacteria Ectothiorhodospira. These bacteria are found inside the cyanobacterial bundle, enclosed by the cyanobacterial sheath. Detailed transmission electron microscopical analyses carried out in horizontal sections of the upper 1.5 mm of the cyanobacterial mat show this cyanobacterial-purple bacterial association at depths of 300-1200 micrometers, corresponding to the zone below that of maximal oxygenic photosynthesis. Sharp gradients of oxygen and sulfide are established during the day at this microzone in the two cyanobacterial mats studied. The close association, the distribution pattern of this association and preliminary physiological experiments suggest a co-metabolism of sulfur by the two-membered community. This probable new genus of purple bacteria may also grow photoheterotrophically using organic carbon excreted by the cyanobacterium. Since the chemical gradients in the entire photic zone fluctuate widely in a diurnal cycle, both types of metabolism probably take place. During the morning and afternoon, sulfide migrates up to the photic zone allowing photoautotrophic metabolism with sulfide as the electron donor. During the day the photic zone is highly oxygenated and the purple bacteria may either use oxidized species of sulfur such as elemental sulfur and thiosulfate in the photoautotrophic mode or grow photoheterotrophically using organic carbon excreted by M. chthonoplastes. The new type of filamentous purple sulfur bacteria is not available yet in pure culture, and its taxonomical position cannot be fully established. This organism is suggested to be a new type of gliding, filamentous, purple phototroph.
    Keywords: Exobiology
    Type: Archives of microbiology (ISSN 0302-8933); Volume 147; 213-20
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  • 2
    Publication Date: 2011-08-24
    Description: Over evolutionary time RNA sequences which are successfully fixed in a population are selected from among those that satisfy the structural and chemical requirements imposed by the function of the RNA. These sequences together comprise the structure space of the RNA. In principle, a comprehensive understanding of RNA structure and function would make it possible to enumerate which specific RNA sequences belong to a particular structure space and which do not. We are using bacterial 5S rRNA as a model system to attempt to identify principles that can be used to predict which sequences do or do not belong to the 5S rRNA structure space. One promising idea is the very intuitive notion that frequently seen sequence changes in an aligned data set of naturally occurring 5S rRNAs would be widely accepted in many other 5S rRNA sequence contexts. To test this hypothesis, we first developed well-defined operational definitions for a Vibrio region of the 5S rRNA structure space and what is meant by a highly variable position. Fourteen sequence variants (10 point changes and 4 base-pair changes) were identified in this way, which, by the hypothesis, would be expected to incorporate successfully in any of the known sequences in the Vibrio region. All 14 of these changes were constructed and separately introduced into the Vibrio proteolyticus 5S rRNA sequence where they are not normally found. Each variant was evaluated for its ability to function as a valid 5S rRNA in an E. coli cellular context. It was found that 93% (13/14) of the variants tested are likely valid 5S rRNAs in this context. In addition, seven variants were constructed that, although present in the Vibrio region, did not meet the stringent criteria for a highly variable position. In this case, 86% (6/7) are likely valid. As a control we also examined seven variants that are seldom or never seen in the Vibrio region of 5S rRNA sequence space. In this case only two of seven were found to be potentially valid. The results demonstrate that changes that occur multiple times in a local region of RNA sequence space in fact usually will be accepted in any sequence context in that same local region.
    Keywords: Exobiology
    Type: Journal of molecular evolution (ISSN 0022-2844); Volume 56; 1; 69-76
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  • 3
    Publication Date: 2018-06-08
    Description: We report on the discovery and follow-up timing observations of a 63-ms radio pulsar, PSR J1105-6107. We show that the pulsar is young, having a characteristic age of only 63kyr. We consider its possible association with the nearby remnant G290.1-0.8 (MSH 11-61A) but uncertainties in the distances and ages preclude a firm conclusion.
    Keywords: Astronomy
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  • 4
    Publication Date: 2019-07-19
    Description: We present calculations of the early stages of the formation of Jupiter via core nucleated accretion and gas capture. The core begins as a seed body of about 350 kilometers in radius and orbits in a swarm of planetesimals whose initial radii range from 15 meters to 100 kilometers. We follow the evolution of the swarm by accounting for growth and fragmentation, viscous and gravitational stirring, and for drag-induced migration and velocity damping. Gas capture by the core substantially enhances the cross-section of the planet for accretion of small planetesimals. The dust opacity within the atmosphere surrounding the planetary core is computed self-consistently, accounting for coagulation and sedimentation of dust particles released in the envelope as passing planetesimals are ablated. The calculation is carried out at an orbital semi-major axis of 5.2 AU and an initial solids' surface density of 10/g/cm^2 at that distance. The results give a core mass of 7 Earth masses and an envelope mass of approximately 0.1 Earth mass after 500,000 years, at which point the envelope growth rate surpasses that of the core. The same calculation without the envelope gives a core mass of only 4 Earth masses.
    Keywords: Astronomy
    Type: ARC-E-DAA-TN10762 , NCTS# 16972-14; Annual Meeting, Division for Planetary Science; Oct 06, 2013 - Oct 11, 2013; Denver, CO; United States
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  • 5
    Publication Date: 2019-07-13
    Description: No abstract available
    Keywords: Astronomy
    Type: LWA Current and Future Users Meeting; May 12, 2011 - May 13, 2011; Albuquerque, NM; United States
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  • 6
    Publication Date: 2019-07-13
    Description: No abstract available
    Keywords: Astronomy
    Type: National Radio Science Meeting (USNC-URSI); Jan 05, 2011 - Jan 09, 2011; Boulder, CO; United States
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  • 7
    Publication Date: 2019-07-20
    Description: Disk disperse in a few million years, before which they must form planets. Photoevaporation and viscosity are mainly responsible for disk dispersal. EUV, FUV and X-rays have all been suggested as photoevaporation agents, disk evolutionary scenarios and predicted mass loss rates in each case differ. Stellar mass and radiation field, disk properties, magnitude of viscosity, and dust evolution all play significant roles in determining the evolution of the disk and its lifetime. Observational diagnostics of photoevaperative flows include [Nell] and perhaps [OI]. These are at present inconclusive and better diagnostics are needed.
    Keywords: Astronomy
    Type: ARC-E-DAA-TN17213 , The Disk in Relation to The Formation of Planets And Their Protoatmospheres; Aug 25, 2014 - Aug 29, 2014; Beijing; China
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  • 8
    Publication Date: 2019-07-13
    Description: Motivation for the study is: (1) Lunar Radio Array for low frequency, high redshift Dark Ages/Epoch of Reionization observations (z =6-50, f=30-200 MHz) (2) High precision cosmological measurements of 21 cm H I line fluctuations (3) Probe universe before first star formation and provide information about the Intergalactic Medium and evolution of large scale structures (5) Does the current cosmological model accurately describe the Universe before reionization? Lunar Radio Array is for (1) Radio interferometer based on the far side of the moon (1a) Necessary for precision measurements, (1b) Shielding from earth-based and solar RFI (12) No permanent ionosphere, (2) Minimum collecting area of approximately 1 square km and brightness sensitivity 10 mK (3)Several technologies must be developed before deployment The power needed to process signals from a large array of nonsteerable elements is not prohibitive, even for the Moon, and even in current technology. Two different concepts have been proposed: (1) Dark Ages Radio Interferometer (DALI) (2)( Lunar Array for Radio Cosmology (LARC)
    Keywords: Astronomy
    Type: National Radio Science Meeting; Jan 05, 2011; Boulder, CO; United States
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  • 9
    Publication Date: 2019-07-13
    Description: The focal point of phenylalanine biosynthesis is a dehydratase reaction which in different organisms may be prephenate dehydratase, arogenate dehydratase, or cyclohexadienyl dehydratase. Gram-positive, Gram-negative, and cyanobacterial divisions of the eubacterial kingdom exhibit different dehydratase patterns. A new extreme-halophile isolate, which grows on defined medium and is tentatively designated as Halobacterium vallismortis CH-1, possesses the interlock type of prephenate dehydratase present in Gram-positive bacteria. In addition to the conventional sensitivity to feedback inhibition by L-phenylalanine, the phenomenon of metabolic interlock was exemplified by the sensitivity of prephenate dehydratase to allosteric effects produced by extra-pathway (remote) effectors. Thus, L-tryptophan inhibited activity while L-tyrosine, L-methionine, L-leucine and L-isoleucine activated the enzyme. L-Isoleucine and L-phenylalanine were effective at micromolar levels; other effectors operated at mM levels. A regulatory mutant selected for resistance to growth inhibition caused by beta-2-thienylalanine possessed an altered prephenate dehydratase in which a phenomenon of disproportionately low activity at low enzyme concentration was abolished. Inhibition by L-tryptophan was also lost, and activation by allosteric activators was diminished. Not only was sensitivity to feedback inhibition by L-phenylalanine lost, but the mutant enzyme was now activated by this amino acid (a mutation type previously observed in Bacillus subtilis). It remains to be seen whether this type of prephenate dehydratase will prove to be characteristic of all archaebacteria or of some archaebacterial subgroup cluster.
    Keywords: Exobiology
    Type: Archives of microbiology (ISSN 0302-8933); 148; 365-71
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  • 10
    Publication Date: 2019-07-13
    Description: An amitochondriate trichomonad cell of the family Devescovinidae (Class Parabasalia), helped demonstrate the fluid model of lipoprotein cell membranes. This wood-ingesting symbiont in the hindgut of the dry wood-eating termite Cryptotermes cavifrons is informally known to cell biologists as "Rubberneckia". As the microtubular axo-style complex generates force causing clockwise movement of the entire anterior portion of the cell at the shear zone the protist displays "head" rotation. Studies by phase contrast and videomicroscopy of live cells, of whole mounts by scanning, and thin sections by transmission electron microscopy extend the observations of Tamm and Tamm [24-26] and Tamm [19-23]. Habitat, cell shape, size, nuclear features, parabasal apparatus and other morphological details permit the assignment of "Rubberneckia" to Kirby's cosmopolitan genus Caduceia. This large-sized devescovinid has distinctive parabasal gyres, an axostylar rotary, motor, and regularly-associated nonflagellated, fusiform and flagellated rod epibiotic surface bacteria. In addition to regularly aligned epibionts intranuclear and endocytoplasmic bacteria are abundant and hydrogenosomes are Present. "Rubberneckia" is compared here to the other seven species of Caduceia. Since it is clearly sufficiently distinctive to warrant new species status, we named it C. versatilis.
    Keywords: Exobiology
    Type: European journal of protistology (ISSN 0932-4739); 35; 3; 327-37
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