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  • Chemistry  (272)
  • Life and Medical Sciences  (121)
  • SPACECRAFT DESIGN, TESTING AND PERFORMANCE  (19)
  • 1
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    In:  http://aquaticcommons.org/id/eprint/20862 | 9 | 2016-06-30 16:07:47 | 20862 | Central Caribbean Marine Institute
    Publication Date: 2021-07-13
    Description: Ocean acidification poses a serious threat to a broad suite of calcifying organisms. Scleractinian corals and cal-careous algae that occupy shallow, tropical waters are vulnerable to global changes in ocean chemistry be-cause they already are subject to stressful and variable carbon dynamics at the local scale. For example, netheterotrophy increases carbon dioxide concentrations, and pH varies with diurnal fluctuations in photosyn-thesis and respiration. Few researchers, however, have investigated the possibility that carbon dioxide con-sumption during photosynthesis by non-calcifying photoautotrophs, such as seagrasses, can amelioratedeleterious effects of ocean acidification on sympatric calcareous algae. Naturally occurring variations inthe density of seagrasses and associated calcareous algae provide an ecologically relevant test of the hypoth-esis that dielfluctuations in water chemistry driven by cycles of photosynthesis and respiration withinseagrass beds create microenvironments that enhance macroalgal calcification. In Grape Tree Bay off LittleCayman Island BWI, we quantified net production and characterized calcification for thalli of the calcareousgreen algaHalimeda incrassatagrowing within beds ofThalassia testudinumwith varying shoot densities. Re-sults indicated that individualH.incrassatathalli were ~6% more calcified in dense seagrass beds. On an arealbasis, however, far more calcium carbonate was produced byH.incrassatain areas where seagrasses wereless dense due to higher rates of production. In addition, diel pH regimes in vegetated and unvegetatedareas within the lagoon were not significantly different, suggesting a high degree of water exchange andmixing throughout the lagoon. These results suggest that, especially in well-mixed lagoons, carbonate pro-duction by calcareous algae may be more related to biotic interactions between seagrasses and calcareousalgae than to seagrass-mediated changes in local water chemistry.
    Keywords: Biology ; Chemistry ; Ecology ; Environment ; Calcareous algae ; Calcification ; Ocean acidification ; Photosynthesis ; Respiration ; Seagrass
    Repository Name: AquaDocs
    Type: article , TRUE
    Format: application/pdf
    Format: application/pdf
    Format: 73-80
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  • 2
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 13 (1989), S. 170-180 
    ISSN: 0886-1544
    Keywords: Avena ; cytoskeleton ; Gramineae ; guard cell ; microtubule ; stomatal complex ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Changes in microtubule organization were monitored in the stomatal complexes of Avena sativa using tubulin immunocytochemistry. Radial arrays of cortical microtubules, previously thought to be characteristic of guard cells, also appear in adjacent subsidiary cells early in development. The subsidiary cell arrays are evident even before guard cells form via division of precursor guard mother cells. Thus, before the stomatal pore opens between sister guard cells, each complex contains four similar microtubule arrays. As the pore opens, however, the subsidiary cell system is reorganized into a network of microtubules distributed along the length of the cell. A similar change is effected in the guard cells after the pore opens. Subsidiary cells and guard cells elongate during later stages of differentiation, and a thickened wall is deposited int he narrow midzone of the latter. At the same time, microtubules in both cells assume a more axial orientation. The results are discussed in terms of developmental symmetry and the control of microtubule organization and cell wall deposition.
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  • 3
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    Journal of Chemometrics 4 (1990), S. 47-50 
    ISSN: 0886-9383
    Keywords: Classification ; Pattern recognition ; Preprocessing ; Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Over the past 15 years the linear learning machine has been applied to a large number of chemical problems. The learning machine approach is conceptually simple and does not require knowledge about the statistical distribution of the data. However, there are problems associated with this approach. One problem which has not been investigated is the influence of mislabeled samples on the positioning of the hyperplane in feature space. If a few samples in a data set are incorrectly tagged prior to training (i.e. the samples are labeled as members of class 2 even though they are actually members of class 1), it is still possible using the linear learning machine to achieve a classification success rate of 100% for the training set. However, unfavorable results will be obtained for the prediction set. The magnitude of this effect and its potential implications regarding the proper use of the linear learning machine are discussed.
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  • 4
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    Journal of Chemometrics 6 (1992), S. 357-357 
    ISSN: 0886-9383
    Keywords: Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 5
    ISSN: 0887-624X
    Keywords: aliphatic-aromatic ; polyamide ; catalyzed reactivity ; Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The relationship between the structure and reactivity of aliphatic-aromatic polyamides in the presence of CuI in an inert atmosphere was probed by reacting a family of benzamides with varying degrees of substitution on the amide nitrogen. Experiments with benzamide, N-methylbenzamide, N,N-dimethylbenzamide, N-hexylbenzamide, and N,N-dihexylbenzamide allowed comparison of primary, secondary, and tertiary benzamides and identification of the degradation pathways influenced by CuI. The presence of copper iodide enhanced the reactivity of all of the benzamides. Loadings as low as 0.5% led to higher conversion and increased recoverable product yields. Reaction path selectivities were also affected by the addition of CuI. The selectivity to benzene increased for all reactants, and the pathway leading to N-alkylation increased for the reaction of NHB. In all, these results revealed three major reaction pathways influenced by CuI: (1) N—C bond cleavage; (2) N—H bond cleavage; and (3) removal of the amide functional group from the aromatic ring. Kinetic results and visible color changes suggested a direct interaction of CuI with the reactant benzamide. Three electron-rich sites on the reactant benzamide, namely, the lone pairs on the carbonyl oxygen, the lone pair on the amide nitrogen and the aromatic ring, are likely sites of interaction of Cu+. Models invoking the subsequent reaction of complexes formed from Cu+ ion interaction at each of these sites account for the observed products well. © 1997 John Wiley & Sons, Inc. J Polym Sci A: Polym Chem 35: 3305-3322, 1997
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  • 6
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 4 (1984), S. 241-247 
    ISSN: 0886-1544
    Keywords: cytoskeleton ; centrosome ; tonofilaments ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: We present observations on the relative location of the centriole and keratin filament cap in motile PtK1 cells. Subconfluent cells were double labeled with anticentriole and antikeratin sera. These preparations revealed that the centriole is separate from, but neighboring, the keratin filament cap. Serial ultrathin sections confirm this observation. These observations are consistent with the idea that the microtubule organizing center and intermediate filament distribution center are not identical or concentric in PtK1 cells.
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  • 7
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 12 (1989), S. 12-22 
    ISSN: 0886-1544
    Keywords: actin ; CDPK ; cytoskeleton ; cytochalasin D (CD) ; rhodamine-phalloidin (RP) ; pollen ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: We recently purified a calcium-dependent but calmodulin- and phospholipid-independent protein kinase (CDPK) from cultured plant cells (Harmon et al.: Plant Physiology 83:830-837, 1987). A monoclonal antibody (mAb 3B9) directed against CDPK was used to localize this protein in Allium root cells and Tradescantia pollen tubes using immunofluorescence techniques. The mAb 3B9 staining pattern showed that CDPK is localized within a fibrous network in the cytoplasm resembling the normal interphase network of F-actin. Treatment of tissue with 10 μM cytochalasin D (CD) prior to fixation abolished the staining pattern. Double-localization experiments in which pollen tubes were first stained with mAb 3B9 and then with rhodamine-phalloidin (RP) demonstrated that CDPK and F-actin were colocalized. Monoclonal antibody 3B9 did not react with purified actin from rabbit muscle or Dictyostelium and did not bind to proteins corresponding to the Mr of actin in crude extracts of Allium root tips and Tradescantia pollen tubes.CDPK did not phosphorylate purified rabbit muscle or Dictyostelium actin in vitro. Binding studies showed that CDPK (1) does not cosediment with actin filaments and (2) does not form a complex with G-actin. The data indicate that although CDPK does not interact directly with actin, it may be associated with an actin-binding protein and therefore could play a role in the regulation of the plant cytoskeleton.
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  • 8
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 14 (1989), S. 251-262 
    ISSN: 0886-1544
    Keywords: Acanthamoeba ; affinity chromatography ; Dictyostelium ; NMR spectroscopy ; platelets ; myosin ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: We present evidence that native profilin can be purified from cellular extracts of Acanthamoeba, Dictyostelium, and human platelets by affinity chromatography on poly-L-proline agarose. After applying cell extracts and washing the column with 3 M urea, homogeneous profilin is eluted by increasing the urea concentration to 6-8 M. Acanthamoeba profilin-I and profilin-II can subsequently be separated by cation exchange chromatography. The yield of Acanthamoeba profilin is twice that obtained by conventional methods. Several lines of evidence show that the profilins fully renature after removal of the urea by dialysis: (1) dialyzed Acanthamoeba and human profilins rebind quantitatively to poly-L-proline and bind to actin in the same way as native, conventionally purified profilin without urea treatment; (2) dialyzed profilins form 3-D crystals under the same conditions as native profilins; (3) dialyzed Acanthamoeba profilin-I has an NMR spectrum identical with that of native profilin-I; and (4) dialyzed human and Acanthamoeba profilins inhibit actin polymerization. We report the discovery of profilin in Dictyostelium cell extracts using the same method. Based on these observations we conclude that urea elution from poly-L-proline agarose followed by renaturation will be generally useful for preparing profilins from a wide variety of cells. Perhaps also of general use is the finding that either myosin-II or alpha-actinin in crude cell extracts, can be bound selectively to the poly-L-proline agarose column depending on the ionic conditions used to equilibrate the column. We have purified myosin-II from both Acanthamoeba and Dictyostelium cell extracts and alpha-actinin from Acanthamoeba cell extracts in the appropriate buffers. These proteins are retained as complexes with actin by the agarose and not by a specific interaction with poly-L-proline. They can be eluted by dissociating the complexes with ATP and separated from actin by gel filtration if necessary.
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  • 9
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 17 (1990), S. 291-300 
    ISSN: 0886-1544
    Keywords: PtK1 keratin filaments ; electrophoresis ; autoradiography ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Treatment of PtK1 cells with 5 mM acrylamide for 4 hr induces reversible de-phosphorylation of keratin in concert with reversible aggregation of intermediate filaments (Eckert and Yeagle, Cell Motil. Cytoskeleton 11:24-30, 1988). We have examined this phenomenon by 1) in vitro phosphorylation of isolated PtK1 keratin filaments and 2) combined treatments of PtK1 cells with both acrylamide and agents which elevate intracellular cAMP levels. PtK1 keratins were incubated in gamma-32P-ATP in the presence or absence of cAMP-dependent kinase (A-kinase) and cAMP. Levels of phosphorylation were analyzed by electrophoresis and autoradiography. Phosphorylation of keratin polypeptides (56 kD, 53 kD, 45 kD, 40 kD) occurred without added kinase, suggesting the presence of an endogenous kinase which remains with intermediate filaments in residues of Triton X-100 extracted cells. Phosphorylation levels were increased by A-kinase but not by cAMP alone, indicating the presence of cAMP-dependent phosphorylation sites in addition to sites phosphorylated by the endogenous kinase. To study the possible role of cAMP-dependent phosphorylation in acrylamide-induced aggregation of keratin filaments, we treated cells with acrylamide in the presence of 8-bromo-cAMP (brcAMP), pertussis toxin (PT), isobutylmethylxanthine (IBMX), or forskolin, which increase intracellular cAMP levels. The distribution and phosphorylation levels of keratin filaments, as well as intracellular cAMP levels, were determined for each of these treatments. In addition to aggregation and dephosphorylation of keratin filaments reported previously, treatment of cells with acrylamide alone also results in reduced levels of intracellular cAMP. 8-bromo-cAMP, IBMX, and forskolin prevent acrylamide-induced aggregation of keratin filaments and result in both normal levels of keratin phosphorylation and normal intracellular cAMP levels. PT was apparently ineffective. These observations suggest that 1) PtK1 keratins are phosphorylated by cAMP-dependent kinase and an endogenous, cAMP-independent kinase and 2) alteration of levels of cAMP-dependent phosphorylation may be involved in aggregation of keratin filaments in response to acrylamide.
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  • 10
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 23 (1992), S. 252-264 
    ISSN: 0886-1544
    Keywords: Allium ; Tradescantia ; actin ; cell cortex ; division plane determination ; immunocytochemistry ; mitosis ; microtubules ; preprophase band ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: In order to assess the possible role of microfilaments (Mfs) in events preceding plant cell division, actin was localized in root cells of Allium cepa and Tradescantia virginiana by immunofluorescence microscopy. The distribution of Mfs was compared to that of microtubules (Mts) by means of dual localizations employing both antiactin and antitubulin. Cycling interphase cells contain Mfs that extend into all regions of the cytoplasm in random fashion. Prior to the rearrangement of the cortical Mt array into the initial broad preprophase band (PPB), the number of Mfs in the cytoplasm decreases, while a new population appears in the cortex. The cortical Mfs, which usually occupy the entire cell surface, are aligned parallel to the cortical Mts. When the initial PPB appears, these Mfs still cover the cortex or are arranged as a broad band encompassing the PPB. As the PPB narrows, the Mfs are also confined to an increasingly restricted zone usually wider than the PPB.than the PPB. When the PPB reaches its narrowest, densest configuration, aligned Mfs are excluded from the band proper, while others appear in flanking regions of the cortex. From prometaphase through anaphase, cortical Mfs are largely restricted to the ends of the cell overlying the spindle poles; they also tend to become more randomly oriented. Little or no actin is present in the spindle. During telophase, the two zones of aligned cortical Mfs over the ends of the cell gradually disappear and are replaced by new interphase networks. These changes provide additional data on the possible control of PPB organization by actin, and in addition indicate that the cortex may be the origin of the actin that aggregates at the spindle poles during cytochalasin treatment. © 1992 Wiley-Liss, Inc.
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