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  • 1
    Publication Date: 2015-10-13
    Description: Inositol-1,4,5-trisphosphate receptors (InsP3Rs) are ubiquitous ion channels responsible for cytosolic Ca(2+) signalling and essential for a broad array of cellular processes ranging from contraction to secretion, and from proliferation to cell death. Despite decades of research on InsP3Rs, a mechanistic understanding of their structure-function relationship is lacking. Here we present the first, to our knowledge, near-atomic (4.7 A) resolution electron cryomicroscopy structure of the tetrameric mammalian type 1 InsP3R channel in its apo-state. At this resolution, we are able to trace unambiguously approximately 85% of the protein backbone, allowing us to identify the structural elements involved in gating and modulation of this 1.3-megadalton channel. Although the central Ca(2+)-conduction pathway is similar to other ion channels, including the closely related ryanodine receptor, the cytosolic carboxy termini are uniquely arranged in a left-handed alpha-helical bundle, directly interacting with the amino-terminal domains of adjacent subunits. This configuration suggests a molecular mechanism for allosteric regulation of channel gating by intracellular signals.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Fan, Guizhen -- Baker, Matthew L -- Wang, Zhao -- Baker, Mariah R -- Sinyagovskiy, Pavel A -- Chiu, Wah -- Ludtke, Steven J -- Serysheva, Irina I -- P41 GM103832/GM/NIGMS NIH HHS/ -- P41GM103832/GM/NIGMS NIH HHS/ -- R01 GM072804/GM/NIGMS NIH HHS/ -- R01 GM079429/GM/NIGMS NIH HHS/ -- R01 GM080139/GM/NIGMS NIH HHS/ -- R01GM072804/GM/NIGMS NIH HHS/ -- R01GM079429/GM/NIGMS NIH HHS/ -- R01GM080139/GM/NIGMS NIH HHS/ -- R21 AR063255/AR/NIAMS NIH HHS/ -- R21 GM100229/GM/NIGMS NIH HHS/ -- R21AR063255/AR/NIAMS NIH HHS/ -- R21GM100229/GM/NIGMS NIH HHS/ -- S10 OD016279/OD/NIH HHS/ -- S10OD016279/OD/NIH HHS/ -- England -- Nature. 2015 Nov 19;527(7578):336-41. doi: 10.1038/nature15249. Epub 2015 Oct 12.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biochemistry and Molecular Biology, Structural Biology Imaging Center, The University of Texas Medical School at Houston, 6431 Fannin Street, Houston, Texas 77030, USA. ; National Center for Macromolecular Imaging, Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, One Baylor Plaza, Houston, Texas 77030, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26458101" target="_blank"〉PubMed〈/a〉
    Keywords: Allosteric Regulation ; Animals ; Apoproteins/chemistry/metabolism/ultrastructure ; Calcium/metabolism ; Calcium Signaling ; *Cryoelectron Microscopy ; Cytosol/chemistry/metabolism ; Inositol 1,4,5-Trisphosphate Receptors/chemistry/*metabolism/*ultrastructure ; Ion Channel Gating ; Models, Molecular ; Protein Folding ; Protein Structure, Quaternary ; Protein Structure, Secondary ; Protein Structure, Tertiary ; Protein Subunits/chemistry/metabolism ; Rats ; Ryanodine Receptor Calcium Release Channel/chemistry/metabolism
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 2
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    University of Maryland Center for Environmental Science. Chesapeake Biological Laboratory | Solomons, MD
    In:  http://aquaticcommons.org/id/eprint/2883 | 130 | 2011-09-29 18:17:42 | 2883 | University of Maryland Center for Environmental Science. Chesapeake Biological Laboratory
    Publication Date: 2021-06-29
    Description: Primary objective was to map concentrations of target contaminants in the surfacial sediments. Secondary objectives included: characterization of potential sites for sediment capping demonstration projects, further characterization of sediment depositional and accumulation patterns, and estimation of historical contaminant inventories through sediment geochronology. (PDF contains 112 pages)
    Description: Maryland Department of the Environment
    Keywords: Ecology ; Pollution ; Environment ; Chemistry ; Polychlorinated biphenyls ; Polycyclic aromatic hydrocarbons ; organochlorine pesticides ; Mercury ; Methylmercury ; Nitrogen ; Sulfur ; Trace metals ; toxic effects ; Chesapeake Bay ; Baltimore Harbor ; Patapsco river ; Back river ; Maryland ; carbon ; PCB ; Cadmium ; Chromium ; Nickel ; Copper ; Zinc
    Repository Name: AquaDocs
    Type: monograph
    Format: application/pdf
    Format: application/pdf
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  • 3
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    University of Maryland Center for Environmental Science. Chesapeake Biological Laboratory | Solomons, MD
    In:  http://aquaticcommons.org/id/eprint/19005 | 130 | 2015-12-01 18:48:40 | 19005 | University of Maryland Center for Environmental Science. Chesapeake Biological Laboratory
    Publication Date: 2021-07-13
    Description: We hypothesize that the impact of PCB desorption from resuspended sediments depends upon the intensity of the resuspension (which scales to bottom stress in the absence of organisms), the rate at which each congener desorbs (which depends on the size and hydrophobicity of the chemical, the relative amount of 'labile' and 'resistant' forms, and the size distribution of the suspended particles), and the residence time of the particles in the water column (which depends on the time-variable water column turbulence regime and the particle settling velocities). In order to accurately quantify the impact of PCB desorption from Hudson River sediments, we are conducting experiments that realistically mimic bottom shear stress and water column turbulence and rapidly measure PCB congener release. The objectives of this study are to measure the kinetics of PCB congener desorption from Hudson River sediments under realistic bottom shear and water column turbulence conditions and to quantify the impact of shear stress and contaminant aging on PCB desorption kinetics.
    Description: Hudson River Foundation
    Description: Ref. No. [UMCES] CBL 004-018
    Keywords: Chemistry ; Environment ; Pollution
    Repository Name: AquaDocs
    Type: monograph
    Format: application/pdf
    Format: application/pdf
    Format: 6
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  • 4
    Electronic Resource
    Electronic Resource
    Hoboken, NJ : Wiley-Blackwell
    AIChE Journal 30 (1984), S. 37-44 
    ISSN: 0001-1541
    Keywords: Chemistry ; Chemical Engineering
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: The bubble formation process at small, single, circular orifices at low gas flow rates is modified when the system is vertically vibrated in a sinusoidal fashion.For systems with significant gas chamber volume, bubble volume in the vibrated case is smaller than in the nonvibrated case. The vibrations increase the amount of liquid weeping through the orifice into the gas chamber. A simple inviscid model adequately predicts bubble formation in the medium-chamber-volume region at low values of amplitude and frequency of vibration and low viscosities. The boundaries of the transition from the FR ≫ 1 to the FR = 1 regions are described in terms of “the acceleration number/Eötvös number”.
    Additional Material: 11 Ill.
    Type of Medium: Electronic Resource
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  • 5
    Electronic Resource
    Electronic Resource
    Hoboken, NJ : Wiley-Blackwell
    AIChE Journal 11 (1965), S. 268-273 
    ISSN: 0001-1541
    Keywords: Chemistry ; Chemical Engineering
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: The motion of individual air bubbles in a water stream flowing turbulently in a 4 in. × 4 in. vertical conduit is investigated by photographic means. The bulk water velocity ranges from 40.8 to 267 cm./sec., corresponding to a system Reynolds number range of 48,600 to 386,000. Both tap and demineralized water were used at or near room temperatures. Air bubbles range from 0.038 to 0.70 cm. in equivalent radius and the corresponding bubble Reynolds number based on relative velocity ranges from 58 to 4,500.The results indicated that the bubble relative velocity in a turbulent water stream is similar to the rise velocity of single bubbles through a quiescent liquid. It was found to be practically independent of the system Reynolds number for bubbles having an equivalent radius above 0.3 cm. Large fluctuations in the bubble velocities were noted in all cases. The drag coefficient is, in general, lower for the demineralized water tests than for tap water when the bubble Reynolds number is below 2,000. Above this value, a mergence of the drag coefficients for all tests occur with a peak of approximately 2.0 at a bubble Reynolds number of 3,000, which is lower than the nonflow value of 2.6.
    Additional Material: 9 Ill.
    Type of Medium: Electronic Resource
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  • 6
    Electronic Resource
    Electronic Resource
    Hoboken, NJ : Wiley-Blackwell
    AIChE Journal 18 (1972), S. 734-738 
    ISSN: 0001-1541
    Keywords: Chemistry ; Chemical Engineering
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: Bass' feedback controller design technique is extended to distributed parameter systems and its use is illustrated for a parabolic system with boundary control.The development of the design technique rests on a conjecture concerning the necessary and sufficient conditions for the asymptotic stability of linear time invariant partial differential equations. It is shown through a study of the discretized analog of a distributed system that the most likely candidate for a Lyapunov functional general enough to yield the necessary and sufficient conditions for asymptotic stability is a double integral with a symmetric kernel.
    Additional Material: 1 Ill.
    Type of Medium: Electronic Resource
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  • 7
    Electronic Resource
    Electronic Resource
    Hoboken, NJ : Wiley-Blackwell
    AIChE Journal 11 (1965), S. 825-831 
    ISSN: 0001-1541
    Keywords: Chemistry ; Chemical Engineering
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: Analytical solutions were obtained for temperature distributions in a single adiabatic fuel cell with heat generation by TΔS, I2R, and polarization. With these results it is possible to characterize heat transfer in a battery with convection in the fuel and air streams, and with conduction of heat in three directions, by means of an average temperature for which an analytical solution was also obtained. Although the temperature can be kept within safe limits in low-power density batteries, the results show that critical dimensions exist beyond which failure by thermal buckling will occur.
    Additional Material: 7 Ill.
    Type of Medium: Electronic Resource
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  • 8
    Electronic Resource
    Electronic Resource
    Hoboken, NJ : Wiley-Blackwell
    AIChE Journal 17 (1971), S. 1006-1008 
    ISSN: 0001-1541
    Keywords: Chemistry ; Chemical Engineering
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: No. Abstract.
    Additional Material: 2 Ill.
    Type of Medium: Electronic Resource
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  • 9
    Electronic Resource
    Electronic Resource
    Hoboken, NJ : Wiley-Blackwell
    AIChE Journal 17 (1971), S. 69-74 
    ISSN: 0001-1541
    Keywords: Chemistry ; Chemical Engineering
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: Convective diffusion of heat is a problem which arises in many areas. Since most thermal transport situations involve more than one material insulation, supports, etc., the treatment of composite regions is of interest. In certain systems, namely, those involving chemical or nuclear reactions, heat generation may be either localized or distributed. In this paper a general analytical treatment of this problem is made by using a double Fourier series technique involving an extended orthogonality concept. This treatment is then applied to the solutions of heat transfer situations arising in electrochemical energy conversion systems. Experimental temperature profiles are presented which test the theory.
    Additional Material: 6 Ill.
    Type of Medium: Electronic Resource
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  • 10
    Electronic Resource
    Electronic Resource
    Hoboken, NJ : Wiley-Blackwell
    AIChE Journal 40 (1994), S. 1498-1514 
    ISSN: 0001-1541
    Keywords: Chemistry ; Chemical Engineering
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: The mathematical tools necessary to describe quantitatively the chemical processes that dictate the performance of exhaust oxygen sensors are developed. Such sensors are used commonly to monitor exhaust streams generated by internal-combustion processes. Calculated results compare well with available experimental results, although several open questions are idetified that require more experimental data. The mathematical formalism for describing the transport of gaseous species through the porous spinel structure protecting the platinum electrode on the exhaust side of the sensor is developed based on the Stefan-Maxwell equations. The kinetic processes occurring at the interface formed by the platinum electrode and the spinel structure, including the oxidation of hydrogen and carbon monoxide and various adsorption-desorption reactions, enter as boundary conditions for the transport equations. The analysis enables one to calculate the sensor's voltage response as a function of the air-to-fuel ratio λ and to investigate phenomena such as the magnitude of the voltage jump in going from rich to lean gas mixtures and the λ value at which this jump occurs.
    Additional Material: 9 Ill.
    Type of Medium: Electronic Resource
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