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  • Accession number, genetics; Area/locality; BP_A714; BP_A715; BP_A751; CH_B184; Collection; DATE/TIME; Deep-sea Sponge Grounds Ecosystems of the North Atlantic; DEPTH, water; Identification; Investigator; KAH0606; KAH0606/D3; Kaharoa; LATITUDE; LONGITUDE; MB_I711; MB_W427; MB_W435; MB_W446; MB_W447; MB_W448; MB_W452; MB_W454; SL_D39; South Pacific Ocean; Species; SponGES; Station label; TAN0803; TAN0803/48; TAN0803/69; TAN1105; TAN1105/43; Tangaroa; Tasman Sea; TKI_B93; TKI_Z15944; TKI_Z9678; TKI_Z9686; TKI_Z9699; TKI_Z9710; TRIP3072/8; Type  (1)
  • Agassiz Trawl; AGT; Area/locality; DATE/TIME; Deep-sea Sponge Grounds Ecosystems of the North Atlantic; Depth, bathymetric; Device type; Dredge, triangle; Event label; G. O. Sars (2003); gametogenesis; Geodia sp.; GS16A-202; GS2016109A; GS2016109A-06-ROV-01; GS2017110; GS2017110-09-ROV-6; GS2017110-23-ROV12; GS2017110-57-AGT-01; Hans Brattström; HB2016944; HB2016944_2; HB2016952; HB2016952_6; Investigator; Korsfjord; Kosterfjord; Latitude of event; Longitude of event; Nereus; Nereus20160405; Nereus20160405_ROV; Porifera; Remote operated vehicle; ROV; Sample code/label; Schultz Bank; Sex; Species; SponGES; Sula reef; TAD; Transcriptomics; Tromsøflaket  (1)
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  • 1
    facet.materialart.
    Unknown
    Transcriptomic and histological analysis (Light and Transmission Electron Microscopy) on five Geodia species to identify their reproductive status and the gene expression during gametogenesis (2020)
    PANGAEA
    In:  Natural History Museum
    Details
    Publication Date: 2023-03-03
    Description: The collected samples of Geodia species were used to identify if they were reproductive and understand which genes are expressed during gametogenesis. Specifically, specimens fixed in glutaraldehyde solution, were processed for histological analysis to observe gametes in the sponge tissue. Once, we identified male, female (while in gametogenesis) and non-reproductive specimens, we used the RNAlater fixed samples to extract RNA from those specimens. Then, we prepared cDNA libraries, sequenced them with illumina nextseq and we did differential gene expression analysis in order to compare the expressed genes in male vs female specimens and vs non-reproductive specimens. The goal was to understand the molecular machinery of gametogenesis in sponges from an evolutionary point of view.
    Keywords: Agassiz Trawl; AGT; Area/locality; DATE/TIME; Deep-sea Sponge Grounds Ecosystems of the North Atlantic; Depth, bathymetric; Device type; Dredge, triangle; Event label; G. O. Sars (2003); gametogenesis; Geodia sp.; GS16A-202; GS2016109A; GS2016109A-06-ROV-01; GS2017110; GS2017110-09-ROV-6; GS2017110-23-ROV12; GS2017110-57-AGT-01; Hans Brattström; HB2016944; HB2016944_2; HB2016952; HB2016952_6; Investigator; Korsfjord; Kosterfjord; Latitude of event; Longitude of event; Nereus; Nereus20160405; Nereus20160405_ROV; Porifera; Remote operated vehicle; ROV; Sample code/label; Schultz Bank; Sex; Species; SponGES; Sula reef; TAD; Transcriptomics; Tromsøflaket
    Type: Dataset
    Format: text/tab-separated-values, 245 data points
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
    DATA PANGAEA
  • 2
    facet.materialart.
    Unknown
    Collection data and Genbank numbers of Lamellomorpha and Poecillastra species from New Zealand (2018)
    PANGAEA
    In:  Supplement to: Kelly, Michelle; Cárdenas, Paco; Rush, Nicola; Sim-Smith, Carina; MacPherson, Diana; Page, Mike; Bell, Lori J (2019): Molecular study supports the position of New Zealand endemic genus Lamellomorpha in family Vulcanellidae (Demospongiae, Tetractinellida, Astrophorina), with the description of three new species. European Journal of Taxonomy, 506, 1-25, https://doi.org/10.5852/ejt.2019.506
    Details
    Publication Date: 2024-05-03
    Description: Collection data and Genbank numbers (COI and 28S (C1-C2)) for New Zealand specimens of Lamellomorpha and Poecillastra studied by Kelly et al.
    Keywords: Accession number, genetics; Area/locality; BP_A714; BP_A715; BP_A751; CH_B184; Collection; DATE/TIME; Deep-sea Sponge Grounds Ecosystems of the North Atlantic; DEPTH, water; Identification; Investigator; KAH0606; KAH0606/D3; Kaharoa; LATITUDE; LONGITUDE; MB_I711; MB_W427; MB_W435; MB_W446; MB_W447; MB_W448; MB_W452; MB_W454; SL_D39; South Pacific Ocean; Species; SponGES; Station label; TAN0803; TAN0803/48; TAN0803/69; TAN1105; TAN1105/43; Tangaroa; Tasman Sea; TKI_B93; TKI_Z15944; TKI_Z9678; TKI_Z9686; TKI_Z9699; TKI_Z9710; TRIP3072/8; Type
    Type: Dataset
    Format: text/tab-separated-values, 267 data points
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
    DATA PANGAEA
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