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  • satellite DNA  (2)
  • Actin gene  (1)
  • Area/locality; ARK-VIII/2; Elevation of event; EPOS; Estimated; European Polarstern Study; Event label; Gear; Latitude of event; Longitude of event; MULT; Multiple investigations; Polarstern; PS19/040; PS19/042; PS19/045; PS19/050; PS19/055; PS19/070; PS19/076; PS19/077; PS19/078; PS19/082; PS19/084; PS19/086; PS19/090; PS19/100; PS19/101; PS19/104; PS19/105; PS19/107; PS19/108; PS19/112; PS19/119A; PS19/125; PS19/134; PS19/136; PS19/141; PS19 EPOS II; Swept area  (1)
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  • 1
    Publication Date: 2023-08-19
    Keywords: Area/locality; ARK-VIII/2; Elevation of event; EPOS; Estimated; European Polarstern Study; Event label; Gear; Latitude of event; Longitude of event; MULT; Multiple investigations; Polarstern; PS19/040; PS19/042; PS19/045; PS19/050; PS19/055; PS19/070; PS19/076; PS19/077; PS19/078; PS19/082; PS19/084; PS19/086; PS19/090; PS19/100; PS19/101; PS19/104; PS19/105; PS19/107; PS19/108; PS19/112; PS19/119A; PS19/125; PS19/134; PS19/136; PS19/141; PS19 EPOS II; Swept area
    Type: Dataset
    Format: text/tab-separated-values, 74 data points
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  • 2
    ISSN: 1432-041X
    Keywords: Antisense RNA ; BPV ; Episomal expression vector ; Actin gene
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary An expression vector was constructed containing the entire bovine papilloma virus (BPV-1) genome and part of the a-actin gene of Xenopus laevis cloned in the antisense orientation into the neomycin resistance gene under the control of the herpes simplex virus (HSV) thymidine kinase (TK) promoter. When this vector is microinjected into X. laevis embryos it replicates extrachromosomally, at least up to the tadpole stage, and a fusion RNA is synthesized after the mid blastula transition (MBT). The expression of the antisense gene results in a morphological abnormality of somites demonstrating that antisense RNA generated by an episomal replicating expression vector can inhibit the expression of a selected gene during early embryogenesis of X. laevis.
    Type of Medium: Electronic Resource
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  • 3
    ISSN: 1573-6849
    Keywords: centromere ; concerted evolution ; fish cytogenetics ; Hoplias ; satellite DNA
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The chromosomes of the primitive South American teleost fishHoplias malabaricus have been analyzed by classical cytogenetic (C-, AgNOR-, Hoechst 33258-, and Q-banding) techniques. A highly repetitive DNA family has been cloned and sequenced. It is a tandemly repeated sequence of about 355 bp, yielding an overall base pair composition of 67% AT with long runs of 〉50% As and 70% Ts. Analysis of sequence variation has allowed the further categorization ofHoplias satellite DNA into two evolutionarily related subfamilies A and B, distinguishable by characteristic insertions and deletions within this 355-bp monomer. Subfamily A satellite is found (in diverged form) at the centromeres of mostH. malabaricus chromosomes. Sequence variants are clustered on specific chromosomal subsets. Subfamily B satellite is highly specific for the paracentromeric heterochromatin on one particular chromosome pair by fluorescencein situ hybridization. These results indicate that theHoplias satellite DNA family has evolved in a concerted manner predominantly via recombination events involving homologous, rather than non-homologous chromosome regions. The clones isolated here may be useful for the molecular, genetic, and cytological analysis of the genusHoplias.
    Type of Medium: Electronic Resource
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  • 4
    ISSN: 1573-6849
    Keywords: evolution ; fish molecular cytogenetics ; Leporinus ; satellite DNA
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A chromosome-specific satellite DNA from the South American fish species Leporinus obtusidens has been isolated and characterized. Sequence analysis and Southern hybridization studies indicate that the cloned 483-bp fragment is 60% AT rich and appears to comprise two diverged monomers. A highly variable low-copy number polymorphism was detected and, thus, this satellite DNA may serve as a valuable genetic marker. Using a Southern blot approach, the cloned satellite DNA cross-hybridized strongly to the DNA of Leporinus elongatus but failed to detect homologous sequences in the genomes of other closely related Leporinus species and higher vertebrates. Using fluorescence in situ hybridization to mitotic metaphase spreads of L. obtusidens and L. elongatus, this satellite DNA was located to the (peri)centromeric region of one single chromosome pair in both species. As the cloned satellite DNA sequence clearly evolved along a chromosomal lineage and is highly variable, it may serve as a very useful marker in further genetic, molecular and cytogenetic studies of the genus Leporinus.
    Type of Medium: Electronic Resource
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