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  • Accession number, genetics; ANME-2; Area/locality; chemoautotrophy; Epsilonproteobacteria; fluid chemistry; Gene name; Hydrogen; hydrogen oxidation; Hydrogen sulfide; LHF; Logatchev_Hydrothermal-Field; Logatchev hydrothermal field; Methane; Methanococcales; Mid-Atlantic Ridge; pH; Remote operated vehicle QUEST; ROVQ; sulfur oxidation; Temperature, water; ultramafic-hosted  (1)
  • Bacteriochlorophyll a  (1)
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  • 1
    ISSN: 1432-072X
    Keywords: Key words Chromatiaceae ; Thiorhodococcus ; Thiocystis ; Thiocapsa ; Coastal lagoon ; Bacteriochlorophyll a ; Rhodopin ; Phylogenetic ; relationships
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A new marine phototrophic purple sulfur bacterium (strain CE2203) was isolated in pure culture from a man-made coastal lagoon located on the Atlantic coast (Arcachon Bay, France). Single cells were coccus-shaped, did not contain gas vesicles, and were highly motile. Intracellular photosynthetic membranes were of the vesicular type. Bacteriochlorophyll a and carotenoids of the normal spirilloxanthin series were present as photosynthetic pigments. Hydrogen sulfide, thiosulfate, elemental sulfur, and molecular hydrogen were used as electron donors during photolithotrophic growth under anoxic conditions, while carbon dioxide was utilized as carbon source. Acetate, propionate, lactate, glycolate, pyruvate, fumarate, succinate, fructose, sucrose, ethanol, and propanol were photoassimilated in the presence of hydrogen sulfide. During growth on sulfide, elemental sulfur globules were stored inside the cells. Chemotrophic growth under microoxic conditions in the dark was possible. The DNA base composition was 66.9 mol% G+C. Comparative sequence analysis of the 16S rRNA gene confirmed the membership of strain CE2203 in the family Chromatiaceae. Morphological characteristics of strain CE2203 indicated a close affiliation to the genera Thiocystis and Thiocapsa. However, the phylogenetic treeing revealed no closer relationship to Thiocystis spp. than to Thiocapsa roseopersicina or other known members of the Chromatiaceae. Consequently, strain CE2203 is proposed as the type strain of a new genus and species, Thiorhodococcus minus gen. nov., sp. nov.
    Type of Medium: Electronic Resource
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  • 2
    Publication Date: 2023-03-15
    Description: Hydrothermal fluid samples were retrieved during dives made by the remotely operated vehicle (ROV) QUEST (MARUM, University of Bremen) during the HYDROMAR I (M60/3, 2004) and HYDROMAR II (M64/2, 2005) cruises to the Logatchev hyrothermal field. The samples were retrieved using a pumped flow-through system (Kiel Pumping System KIPS) specially designed for the ROV QUEST. Once on board the ship, the liquids intended for microbiological studies were concentrated on 0.2 µm pore size polycarbonate filters (Sartorius) and stored at -20°C. The pH and sulfide concentrations were determined immediately after sample recovery. The pH was measured (Mettler electrodes with Ag/AgCl reference electrode) at 25°C in unfiltered sample aliquots. Sulfide concentrations were determined photometrically following the methylene blue method or, for samples with low concentrations, by voltammetry (Metrohm Application Bulletin 199/3e). Methane was analyzed on board by applying a purge and trap technique. For on-board measurements of dissolved hydrogen the water sample was degassed into a high-grade vacuum. Aliquots of the released gas were analyzed by gas chromatography (Thermo Electron Corporation Trace GC Ultra with a pulsed discharge detector). The abundance of bacterial and archaeal taxa was investigated by sequencing of the 16S rRNA gene. The diversity of the cbbL, cbbM and aclb was investigated by sequencing of the genes.
    Keywords: Accession number, genetics; ANME-2; Area/locality; chemoautotrophy; Epsilonproteobacteria; fluid chemistry; Gene name; Hydrogen; hydrogen oxidation; Hydrogen sulfide; LHF; Logatchev_Hydrothermal-Field; Logatchev hydrothermal field; Methane; Methanococcales; Mid-Atlantic Ridge; pH; Remote operated vehicle QUEST; ROVQ; sulfur oxidation; Temperature, water; ultramafic-hosted
    Type: Dataset
    Format: text/tab-separated-values, 26 data points
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