Publication Date:
2024-03-18
Description:
Identification of 16 selected bacteria associated to the umbrella of Periphylla periphylla collected in the Irminger Sea based on sequencing of the 16S ribosomal RNA gene and BLAST against the NCBI nucleotide database. The table displays the first 3 hits from two blastn searches, one against all database entries and the second against type strains only. Nucleotide identities (%) with database hits and NCBI accession numbers assigned to the isolated bacteria are also displayed. Colonies were cultured either in marine broth, Hastings medium or Wickerham medium for comparison.
Keywords:
A7-2020; A7-2020_417; Accession number, genetics; Arni Fridriksson; Bacterial strain; Basic Local Alignment Search Tool, National Center for Biotechnology Information, Nucleotide BLAST; blastn; Gene name; Identity; IESSNS_2020; Laboratory experiment; Multipurpose pelagic trawl - 832; MULTPELT-832; Nordic Seas; Sanger Sequencing modified after Sanger et al. (1977); Sequence length; Source material; Species, unique identification; Species, unique identification (Semantic URI); Species, unique identification (URI); SUMMER; Sustainable Management of Mesopelagic Resources; Temperature, air; Treatment: culture medium; Type of study; VID; Visual identification
Type:
Dataset
Format:
text/tab-separated-values, 720 data points
Permalink
