ALBERT

Description: Observations of the tropical atmosphere are fundamental to the understanding of global changes in air quality, atmospheric oxidation capacity and climate, yet the tropics are under-populated with long-term measurements. The first three years (October 2006–September 2009) of meteorological, trace gas and particulate data from the global WMO/Global Atmospheric Watch (GAW) Cape Verde Atmospheric Observatory Humberto Duarte Fonseca (CVAO; 16° 51′ N, 24° 52′ W) are presented, along with a characterisation of the origin and pathways of air masses arriving at the station using the NAME dispersion model and simulations of dust deposition using the COSMO-MUSCAT dust model. The observations show a strong influence from Saharan dust in winter with a maximum in super-micron aerosol and particulate iron and aluminium. The dust model results match the magnitude and daily variations of dust events, but in the region of the CVAO underestimate the measured aerosol optical thickness (AOT) because of contributions from other aerosol. The NAME model also captured the dust events, giving confidence in its ability to correctly identify air mass origins and pathways in this region. Dissolution experiments on collected dust samples showed a strong correlation between soluble Fe and Al and measured solubilities were lower at high atmospheric dust concentrations. Fine mode aerosol at the CVAO contains a significant fraction of non-sea salt components including dicarboxylic acids, methanesulfonic acid and aliphatic amines, all believed to be of oceanic origin. A marine influence is also apparent in the year-round presence of iodine and bromine monoxide (IO and BrO), with IO suggested to be confined mainly to the surface few hundred metres but BrO well mixed in the boundary layer. Enhanced CO2 and CH4 and depleted oxygen concentrations are markers for air-sea exchange over the nearby northwest African coastal upwelling area. Long-range transport results in generally higher levels of O3 and anthropogenic non-methane hydrocarbons (NMHC) in air originating from North America. Ozone/CO ratios were highest (up to 0.42) in relatively fresh European air masses. In air heavily influenced by Saharan dust the O3/CO ratio was as low as 0.13, possibly indicating O3 uptake to dust. Nitrogen oxides (NOx and NOy) show generally higher concentrations in winter when air mass origins are predominantly from Africa. High photochemical activity at the site is shown by maximum spring/summer concentrations of OH and HO2 of 9 × 106 molecule cm−3 and 6 × 108 molecule cm−3, respectively. After the primary photolysis source, the most important controls on the HOx budget in this region are IO and BrO chemistry, the abundance of HCHO, and uptake of HOx to aerosol.

Description: The general aim of setting up a central database on benthos and plankton was to integrate long-, medium- and short-term datasets on marine biodiversity. Such a database makes it possible to analyse species assemblages and their changes on spatial and temporal scales across Europe. Data collation lasted from early 2007 until August 2008, during which 67 datasets were collected covering three divergent habitats (rocky shores, soft bottoms and the pelagic environment). The database contains a total of 4,525 distinct taxa, 17,117 unique sampling locations and over 45,500 collected samples, representing almost 542,000 distribution records. The database geographically covers the North Sea (221,452 distribution records), the North-East Atlantic (98,796 distribution records) and furthermore the Baltic Sea, the Arctic and the Mediterranean. Data from 1858 to 2008 are presented in the database, with the longest time-series from the Baltic Sea soft bottom benthos. Each delivered dataset was subjected to certain quality control procedures, especially on the level of taxonomy. The standardisation procedure enables pan-European analyses without the hazard of taxonomic artefacts resulting from different determination skills. A case study on rocky shore and pelagic data in different geographical regions shows a general overestimation of biodiversity when making use of data before quality control compared to the same estimations after quality control. These results prove that the contribution of a misspelled name or the use of an obsolete synonym is comparable to the introduction of a rare species, having adverse effects on further diversity calculations. The quality checked data source is now ready to test geographical and temporal hypotheses on a large scale.

Description: The major structural characteristics of zooplankton communities that inhabit 35 Arctic lakes in the catchment basin of the Anabar River (Yakutia) have been analyzed. The ecological state of the lakes has been evaluated. The structure-forming abiotic factors that have the greatest influence on the formation of zooplankton communities have been revealed using the indirect ordination method.

Description: The present study examines the influence that environmental variables exerted on changes in condition index (CI), shell height (SH—dorsal-ventral axis) and soft tissue mass increments (STM) of the winged oyster Pteria colymbus in suspended culture during periods of upwelling (December to April) and non-upwelling (August to November) in the Cariaco Gulf, northeastern Venezuela. Environmental variables recorded between April 2012 and May 2013 included seston, water transparency, temperature, dissolved oxygen, chlorophyll a (Chl a) and the upwelling index (UI). Individuals were cultivated in lantern nets with an overall density of 56 individuals/0.123 m2. From three randomly chosen baskets, five individuals were sampled each month and changes in CI, STM and SH were related to the environmental variables using Spearman correlation and PCA. Results show that during upwelling, both Chl a and UI presented a positive and significant relationship with the oyster condition and growth parameters. During non-upwelling (low UI), this relationship was inverse, demonstrating the important influence of upwelling and non-upwelling periods on the ecophysiology of the species. Furthermore, it was shown that the non-upwelling, characterized by high temperatures and low food availability, is a critical period for P. colymbus, judging by a decrease in growth and survival rate. Nonetheless, this species reached 50 mm in 5 months, a size considered as commercially viable, suggesting that the study area is favourable to the cultivation of the winged oyster despite a dramatic decrease in upwelling intensity in the last decade.

Description: Different genetic types of marine sediments that were deposited on the continental slope of the Kronotskii Peninsula with the rate of several tens of centimeters per thousand years during the last 20 ka have been investigated. It is established that their lithological, mineral, and chemical compositions were determined by climate changes.

Description: Quorum sensing (QS) signals have been considered to play important roles in biofilm development and in the attractiveness of biofilms to higher organisms in marine ecosystem. In this study, bacterial QS signalsacylated homoserine lactone derivatives (AHLs) were detected in 2-, 4-, and 6-day-old subtidal biofilms by using AHLs reporter strains. N-dodecanoyl-homoserine lactone (C12-HSL) was identified in 6-day-old biofilm at a concentration of 9.04 μg cm−minus;2 (3.36 mmol l−minus;1). To investigate the possible role of AHLs in the consequent eventlarval settlement of the polychaete Hydroides elegans onto subtidal biofilmsseven biofilm-derived bacteria that effectively induced larval settlement of H. elegans, were screened for AHL production. One of them, the Vibrio sp. UST950701-007, produced N-hexanoyl-homoserine lactone (C6-HSL). Larval settlement bioassay showed that C6-HSL, C12-HSL, and 3-oxo-octanoyl-homoserine lactone (3-oxo-C8-HLS) at certain concentrations induced some initial larval settlement behaviors such as reducing swimming speed, crawling on the bottom. However, these AHLs did not effectively induce larval settlement in comparison to the effective settlement inducer 3-isobutyl-1-methylxanthine. The possible chemokinetic mechanism and indirect effects of AHLs on larval settlement are suggested.

Description:  An ensemble of twenty four coupled ocean-atmosphere models has been compared with respect to their performance in the tropical Pacific. The coupled models span a large portion of the parameter space and differ in many respects. The intercomparison includes TOGA (Tropical Ocean Global Atmosphere)-type models consisting of high-resolution tropical ocean models and coarse-resolution global atmosphere models, coarse-resolution global coupled models, and a few global coupled models with high resolution in the equatorial region in their ocean components. The performance of the annual mean state, the seasonal cycle and the interannual variability are investigated. The primary quantity analysed is sea surface temperature (SST). Additionally, the evolution of interannual heat content variations in the tropical Pacific and the relationship between the interannual SST variations in the equatorial Pacific to fluctuations in the strength of the Indian summer monsoon are investigated. The results can be summarised as follows: almost all models (even those employing flux corrections) still have problems in simulating the SST climatology, although some improvements are found relative to earlier intercomparison studies. Only a few of the coupled models simulate the El Niño/Southern Oscillation (ENSO) in terms of gross equatorial SST anomalies realistically. In particular, many models overestimate the variability in the western equatorial Pacific and underestimate the SST variability in the east. The evolution of interannual heat content variations is similar to that observed in almost all models. Finally, the majority of the models show a strong connection between ENSO and the strength of the Indian summer monsoon.

Description: We describe the behaviour of 23 dynamical ocean-atmosphere models, in the context of comparison with observations in a common framework. Fields of tropical sea surface temperature (SST), surface wind stress and upper ocean vertically averaged temperature (VAT) are assessed with regard to annual mean, seasonal cycle, and interannual variability characteristics. Of the participating models, 21 are coupled GCMs, of which 13 use no form of flux adjustment in the tropics. The models vary widely in design, components and purpose: nevertheless several common features are apparent. In most models without flux adjustment, the annual mean equatorial SST in the central Pacific is too cool and the Atlantic zonal SST gradient has the wrong sign. Annual mean wind stress is often too weak in the central Pacific and in the Atlantic, but too strong in the west Pacific. Few models have an upper ocean VAT seasonal cycle like that observed in the equatorial Pacific. Interannual variability is commonly too weak in the models: in particular, wind stress variability is low in the equatorial Pacific. Most models have difficulty in reproducing the observed Pacific 'horseshoe' pattern of negative SST correlations with interannual Niño3 SST anomalies, or the observed Indian-Pacific lag correlations. The results for the fields examined indicate that several substantial model improvements are needed, particularly with regard to surface wind stress.