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  • 1
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    Sears Foundation of Marine Research
    In:  Journal of Marine Research, 63 (2). pp. 335-358.
    Publication Date: 2018-03-21
    Description: A marine ecosystem model, that had previously been calibrated in a one-dimensional (1D) mode against observations at three time-series and process-study sites simultaneously, is coupled to a three-dimensional (3D) circulation model of the North and Equatorial Atlantic. Compared to an experiment with a previously employed subjectively tuned ecosystem model, the new 3D-model does not only reduce the model-data misfit at those locations at which observations entered the 1D optimization procedure, but also at an oligotrophic site in the subtropics that had not been considered in the 1D calibration. Basin-scale gridded climatological data sets of nitrate, surface chlorophyll, and satellite-derived primary production also reveal a generally lower model-data misfit for the optimized model. The most significant improvement is found in terms of simulated primary production: on average, primary production is about 2.5 times higher in the optimized model which primarily results from the inclusion of a phytoplankton recycling pathway back to dissolved inorganic nitrogen. This recycling pathway also allows for a successful reproduction of nonvanishing surface nitrate concentrations over large parts of the subpolar North Atlantic. Apart from primary production, the parameter optimization reduces root-mean-square misfits by merely 10–25% and remaining misfits are still much larger than observational error estimates. These residual misfits can be attributed both to errors in the physical model component and to errors in the structure of the ecosystem model, which an objective estimation of ecosystem model parameters by data assimilation alone cannot resolve.
    Type: Article , PeerReviewed
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  • 2
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    Sears Foundation of Marine Research
    In:  Journal of Marine Research, 57 . pp. 613-639.
    Publication Date: 2017-11-28
    Description: A means of assimilating simulated satellite ocean color data with a coupled physical-biological model of the North Atlantic Ocean is implemented, allowing the relative sensitivities of different biological parameters to those data to be investigated. The model consists of an eddy-permitting general circulation model derived from the WOCE Community Modeling Effort and a nitrogen-based, four-compartment NPZD marine ecosystem model. Many of the parameters in marine ecosystem models are poorly known and via assimilation, we hope to better constrain their values. The control parameters chosen for the variational assimilation are the model parameters involved in parameterizations of recycling as these are the most poorly known. Simulated observations are taken while following several floats seeded in varying dynamical biogeochemical provinces of the North Atlantic model domain over a six-month period. Twin experimental results show that, for the given functional forms of growth, mortality and grazing, the following parameters can be successfully recovered from simulated satellite ocean color data: nitrate and detrital recycling parameters in the trade wind domain, zooplankton parameters at higher latitudes (westerly wind and polar domains), and the phytoplankton mortality rate in all regions. By simultaneously assimilating ocean color data in different biological provinces, it becomes possible to successfully constrain all ecosystem parameters at once.
    Type: Article , PeerReviewed
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  • 3
    Publication Date: 2017-11-28
    Description: This study relates the performance of an optimized one-dimensional ecosystem model to observations at three sites in the North Atlantic Ocean: the Bermuda Atlantic Time Series Study (BATS, 31N 64W), the location of the North Atlantic Bloom Experiment (NABE, 47N 20W), and Ocean Weather Ship INDIA (OWS-INDIA, 59N 19W). The ecosystem model is based on nitrogen and resolves dissolved inorganic nitrogen (N), phytoplankton (P), zooplankton (Z) and detritus (D), therefore called the NPZD-model. Physical forcing, such as temperature and eddy diffusivities are taken from an eddy-permitting general circulation model of the North Atlantic Ocean, covering a period from 1989 through 1993. When an optimized parameter set is applied, the recycling of organic nitrogen becomes significantly enhanced, compared to previously published results of the NPZD model. The optimized model yields improved estimates of the annual ratio of regenerated to total primary production (f-ratio). The annual f-ratios are 0.09, 0.31, and 0.42 for the locations of BATS, NABE, and OWS-INDIA, respectively. Nevertheless, three major model deficiencies are identified. Most conspicuous are systematic discrepancies between measured 14C-fixation rates and modeled primary production under nutrient depleted conditions. This error is primarily attributed to the assumption of a constant carbon-to-nitrogen ratio for nutrient acquisition. Secondly, the initial period of the modeled phytoplankton blooms is hardly tracked by the model. That particular model deficiency becomes most apparent at the OWS-INDIA site. The interplay between algal growth and short-term alterations in stratification and mixing is believed to be insufficiently resolved by the physical model. Eventually, the model's representation of the vertical nitrogen export appears to be too simple in order to match, at the same time, remineralization within the upper 300 meters and the biomass export to greater depths.
    Type: Article , PeerReviewed
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  • 4
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    Sears Foundation of Marine Research
    In:  Journal of Marine Research, 61 (6). pp. 765-793.
    Publication Date: 2017-11-28
    Description: An optimization experiment is performed with a vertically resolved, nitrogen-based ecosystem model, composed of four state variables (NPZD-model): dissolved inorganic nitrogen (N), phytoplankton (P), herbivorous zooplankton (Z) and detritus (D). Parameter values of the NPZD-model are optimized while assimilating observations at three locations in the North Atlantic simultaneously, namely at the sites of the Bermuda Atlantic Time-Series Study (BATS; 31N 64W), of the North Atlantic Bloom Experiment (NABE; 47N 20W), and of Ocean Weather Ship-India (OWS-INDIA; 59N 19W). A method is described for a simultaneous optimization which effectively merges different types of observational data at distinct sites in the ocean. A micro-genetic algorithm is applied for the minimization of a weighted least square misfit function. The optimal parameter estimates are shown to represent a compromise among local parameter estimates that would be obtained from single-site optimizations at the individual locations. The optimization yields a high estimate of the initial slope parameter of photosynthesis (alpha), which is shown to be necessary to match the initial phases of phytoplankton growth. The estimate of alpha is well constrained by chlorophyll observations at the BATS and OWS-INDIA sites and likely compensates for a deficiency in the parameterization of light-limited growth. The optimization also points toward an enhanced recycling of organic nitrogen which is perceived from a high estimate for the phytoplankton mortality/excretion rate.
    Type: Article , PeerReviewed
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