ALBERT

Description: Deep marine successions of early Campanian age from DSDP site 516F drilled at low paleolatitudes in the South Atlantic reveal distinct sub-Milankovitch variability in addition to precession and eccentricity related variations. Elemental abundance ratios point to a similar 5 climatic origin for these variations and exclude a quadripartite structure - as observed in the Mediterranean Neogene - of the precession related cycles as an explanation for the inferred semi-precession cyclicity in MS. However, the semi-precession cycle itself is likely an artifact, reflecting the first harmonic of the precession signal. The sub-Milankovitch variability is best approximated by a ~ 7 kyr cycle as shown by 10 spectral analysis and bandpass filtering. The presence of sub-Milankovitch cycles with a period similar to that of Heinrich events of the last glacial cycle is consistent with linking the latter to low-latitude climate change caused by a non-linear response to precession induced variations in insolation between the tropics.

Description: The role of small scale single turbulent events in the vertical mixing of near bed suspended sediments was explored in a shallow shelf sea environment. High frequency velocity and suspended sediment concentration (SSC; calibrated from the backscatter intensity) were collected using an Acoustic Doppler Velocimeter (ADV). Using quadrant analysis, the despiked velocity time series was divided into turbulent events and small background fluctuations. Reynolds stress and Turbulent Kinetic Energy (TKE) calculated from all velocity samples, were compared to the same turbulent statistics calculated only from velocity samples classified as turbulent events (Re_events and TKE_events). The comparison showed that Re_events and TKE_events was increased 3 and 1.6 times, respectively, when small background fluctuations were removed and that the correlation with SSC for TKE could be improved through removal of the latter. The correlation between instantaneous vertical turbulent flux (w') and SSC fluctuations (SSC') exhibits a tidal pattern with the maximum correlation at peak ebb and flood currents, when strong turbulent events appear. Individual turbulent events were characterized by type, strength, duration and length. Cumulative vertical turbulent sediment fluxes and average SSC associated with individual turbulent events were calculated. Over the tidal cycle, ejections and sweeps were the most dominant events, transporting 50% and 36% of the cumulative vertical turbulent event sediment flux, respectively. Although the contribution of outward interactions to the vertical turbulent event sediment flux was low (11%), single outward interaction events were capable of inducing similar SSC' as sweep events. The results suggest that on time scales of tens of minutes to hours, TKE may be appropriate to quantify turbulence in sediment transport studies, but that event characteristics, particular the upward turbulent flux need to be accounted for when considering sediment transport on process time scales.

Description: Bedforms both reflect and influence shallow water hydrodynamics and sediment dynamics. A correct characterization of their spatial distribution and dimensions is required for the understanding, assessment and prediction of numerous coastal processes. A method to parameterize geometrical characteristics using two-dimensional (2D) spectral analysis is presented and tested on seabed elevation data from the Knudedyb tidal inlet in the Danish Wadden Sea, where large compound bedforms are found. The bathymetric data were divided into 20x20 m areas on which a 2D spectral analysis was applied. The most energetic peak of the 2D spectrum was found and its energy, frequency and direction were calculated. A power-law was fitted to the average of slices taken through the 2D spectrum; its slope and y-intercept were calculated. Using these results the test area was morphologically classified into 4 distinct morphological regions. The most energetic peak and the slope and intercept of the power-law showed high values above the crest of the primary bedforms and scour holes, low values in areas without bedforms, and intermediate values in areas with secondary bedforms. The secondary bedform dimensions and orientations were calculated. An area of 700x700 m was used to determine the characteristics of the primary bedforms. However, they were less distinctively characterized compared to the secondary bedforms due to relatively large variations in their orientations and wavelengths. The method is thus appropriate for morphological classification of the seabed and for bedform characterization, being most efficient in areas characterized by bedforms with regular dimensions and directions.

Description: State-of-the-art process-based models have shown to be applicable to the simulation and prediction of coastal morphodynamics. On annual to decadal temporal scales, these models may show limitations in reproducing complex natural morphological evolution patterns, such as the movement of bars and tidal channels, e.g. the observed decadal migration of the Medem Channel in the Elbe Estuary, German Bight. Here a morphodynamic model is shown to simulate the hydrodynamics and sediment budgets of the domain to some extent, but fails to adequately reproduce the pronounced channel migration, due to the insufficient implementation of bank erosion processes. In order to allow for long-term simulations of the domain, a nudging method has been introduced to update the model-predicted bathymetries with observations. The model-predicted bathymetry is nudged towards true states in annual time steps. Sensitivity analysis of a user-defined correlation length scale, for the definition of the background error covariance matrix during the nudging procedure, suggests that the optimal error correlation length is similar to the grid cell size, here 80-90 m. Additionally, spatially heterogeneous correlation lengths produce more realistic channel depths than do spatially homogeneous correlation lengths. Consecutive application of the nudging method compensates for the (stand-alone) model prediction errors and corrects the channel migration pattern, with a Brier skill score of 0.78. The proposed nudging method in this study serves as an analytical approach to update model predictions towards a predefined 'true' state for the spatiotemporal interpolation of incomplete morphological data in long-term simulations.

Description: This study examines tide-dependent variations in the formation and dynamics of suspended sediment patterns coupled to mean flow and turbulence above asymmetric bed forms. In the Danish Knudedyb inlet, very large primary bed forms remain ebb-oriented during a tidal cycle while smaller superimposed bed forms reverse direction with each tidal phase. Hydroacoustic in situ observations reveal pronounced differences in suspended sediment transport patterns between tidal phases caused by the relative orientation of primary bed forms and the mean tidal flow and flow unsteadiness during a single tidal phase. When flow and primary bed form orientation are aligned, water-depth-scale macroturbulence develops in the bed form lee-sides in the presence of flow separation. Macroturbulent flow structures occur at high flow stages and are coupled to increased amounts of sediment in suspension. When flow and bed form orientation are opposed no evidence of flow separation associated with primary bed forms is found. Sediment-laden macroturbulence at high flow velocities is of a smaller scale and attributed to the superimposed secondary bed forms. The flow structures are advected along the primary bed form stoss-side (temporary hydraulic lee-side). The steep primary bed form lee-side (temporary hydraulic stoss-side) however, limits transport capabilities beyond the scale of primary bed forms.

Description: The present dataset data contain source data for Figure 5a from Schilling et al., 2009. Cell fate decisions are regulated by the coordinated activation of signalling pathways such as the extracellular signal-regulated kinase (ERK) cascade, but contributions of individual kinase isoforms are mostly unknown. The authors combined quantitative data from erythropoietin-induced pathway activation in primary erythroid progenitor (colony-forming unit erythroid stage, CFU-E) cells with mathematical modelling, in order to predict and experimentally confirmed a distributive ERK phosphorylation mechanism in CFU-E cells. The authors found evidences that double-phosphorylated ERK1 attenuates proliferation beyond a certain activation level, whereas activated ERK2 enhances proliferation with saturation kinetics. CFU-E cells were stimulated with the indicated Epo concentrations for 7 min and phosphorylation levels were determined by quantitative immunoblotting.