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  • PANGAEA  (10)
Collection
Keywords
Years
  • 1
    Publication Date: 2023-03-27
    Description: Pteropods are a group of holoplanktonic gastropods for which global biomass distribution patterns remain poorly resolved. The aim of this study was to collect and synthesize existing pteropod (Gymnosomata, Thecosomata and Pseudothecosomata) abundance and biomass data, in order to evaluate the global distribution of pteropod carbon biomass, with a particular emphasis on its seasonal, temporal and vertical patterns. We collected 25 902 data points from several online databases and a number of scientific articles. The biomass data has been gridded onto a 360 x 180° grid, with a vertical resolution of 33 WOA depth levels. Data has been converted to NetCDF format. Data were collected between 1951-2010, with sampling depths ranging from 0-1000 m. Pteropod biomass data was either extracted directly or derived through converting abundance to biomass with pteropod specific length to weight conversions. In the Northern Hemisphere (NH) the data were distributed evenly throughout the year, whereas sampling in the Southern Hemisphere was biased towards the austral summer months. 86% of all biomass values were located in the NH, most (42%) within the latitudinal band of 30-50° N. The range of global biomass values spanned over three orders of magnitude, with a mean and median biomass concentration of 8.2 mg C l-1 (SD = 61.4) and 0.25 mg C l-1, respectively for all data points, and with a mean of 9.1 mg C l-1 (SD = 64.8) and a median of 0.25 mg C l-1 for non-zero biomass values. The highest mean and median biomass concentrations were located in the NH between 40-50° S (mean biomass: 68.8 mg C l-1 (SD = 213.4) median biomass: 2.5 mg C l-1) while, in the SH, they were within the 70-80° S latitudinal band (mean: 10.5 mg C l-1 (SD = 38.8) and median: 0.2 mg C l-1). Biomass values were lowest in the equatorial regions. A broad range of biomass concentrations was observed at all depths, with the biomass peak located in the surface layer (0-25 m) and values generally decreasing with depth. However, biomass peaks were located at different depths in different ocean basins: 0-25 m depth in the N Atlantic, 50-100 m in the Pacific, 100-200 m in the Arctic, 200-500 m in the Brazilian region and 〉500 m in the Indo-Pacific region. Biomass in the NH was relatively invariant over the seasonal cycle, but more seasonally variable in the SH. The collected database provides a valuable tool for modellers for the study of ecosystem processes and global biogeochemical cycles.
    Keywords: MAREMIP; MARine Ecosystem Model Intercomparison Project
    Type: Dataset
    Format: application/zip, 2.2 MBytes
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  • 2
    Publication Date: 2023-01-13
    Keywords: Abundance per volume; BAS_01; BAS_02; BAS_03; BAS_04; BAS_05; BAS_06; BAS_07; BAS_08; BAS_09; BAS_10; BAS_11; BAS_12; BAS_13; BAS_14; BAS_15; BAS_16; BAS_17; BAS_18; BAS_19; BAS_20; BAS_21; BAS_22; BAS_23; BAS_24; BAS_25; BAS_26; BAS_27; BAS_28; BAS_29; BAS_30; BAS_31; BAS_32; BAS_33; BAS_34; BAS_35; BAS_36; BAS_37; BAS_38; BAS_39; BAS_40; BAS_41; BAS_42; BAS_43; BAS_44; BAS_45; BAS_46; BAS_47; BAS_48; BAS_49; BAS_50; British Antarctic Survey; Date/Time of event; Depth, bottom/max; Depth, top/min; DEPTH, water; Event label; JR1160360; JR1770073; JR1770082; JR1770098; JR1770141; JR1770171; Latitude of event; Longitude of event; Net; NET; Scotia Sea; Taxon/taxa; Type; Uniform resource locator/link to reference
    Type: Dataset
    Format: text/tab-separated-values, 336 data points
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  • 3
    Publication Date: 2023-07-05
    Type: Dataset
    Format: application/zip, 2.1 MBytes
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  • 4
    Publication Date: 2024-02-16
    Description: Understanding the interactive effects of multiple stressors on pelagic mollusks associated with global climate change is especially important in highly productive coastal ecosystems of the upwelling regime, such as the California Current System. Due to temporal overlap between an El Niño event and springtime intensification of the upwelling, pteropods of the California Current System were exposed to co-occurring increased temperature, low Ωar and pH, and deoxygenation. The variability in the natural gradients during NOAA's WCOA 2016 cruise provided a unique opportunity for synoptic study of chemical and biological interactions. We investigated the effects of in situ multiple drivers and their interactions across cellular, physiological, and population levels. Oxidative stress biomarkers were used to assess pteropods' cellular status and antioxidant defenses. OA stress induced significant activation of oxidative stress biomarkers, as indicated by increased levels of lipid peroxidation (LPX) but the antioxidative activity defense might be insufficient against cellular stress. Thermal stress in combination with low Ωar additively increases the level of LPX toxicity, while food availability (chorolophyll) can mediate the negative effect. On the physiological level, we found synergistic interaction between low Ωar and deoxygenation and thermal stress (Ωar: T, O2:T). Since this co-incides with the conditions in the natural settings, we can expect non-linear impact on physiological responses. On the population level, temperature was the main driver of abundance distribution, with low Ωar being a strong driver of secondary importance. The additive effects of thermal stress and low low Ωar on abundance suggest negative effect of El Niño at the population level. Our study clearly demonstrates Ωar and temperature are master variables in explaining biological responses, cautioning the use of a single parameter in the statistical analyses. Because pteropods contain high quantities of polyunsaturated fatty acids, oxidative stress causes LPX, resulting in the loss of lipid reserves and structural damage of cell membranes; corroborating pteropods' extreme sensitivity to OA. Accumulation of oxidative damage requires metabolic compensation, implying energetic trade-offs under combined thermal and OA stress. Oxidative stress biomarkers can be used as an early-warning signal of multiple stress on the cellular level, thereby providing important new insights into factors that set limits to species' tolerance of multiple drivers in the natural environment, especially when mechanistically linked though energetic implications.
    Keywords: 33RO20160505; 33RO20160524; Aragonite saturation state; Carbon dioxide, partial pressure; CTD/Rosette; CTD-RO; Date/Time of event; Elevation of event; Event label; Fluorescence; Latitude of event; Limacina helicina; Longitude of event; Oxygen; pH; Ronald H. Brown; Temperature, water; WCOA2016_100; WCOA2016_101; WCOA2016_102; WCOA2016_103; WCOA2016_104; WCOA2016_105; WCOA2016_106; WCOA2016_107; WCOA2016_108; WCOA2016_109; WCOA2016_110; WCOA2016_111; WCOA2016_112; WCOA2016_113; WCOA2016_114; WCOA2016_115; WCOA2016_116; WCOA2016_117; WCOA2016_118; WCOA2016_119; WCOA2016_120; WCOA2016_121; WCOA2016_122; WCOA2016_123; WCOA2016_124; WCOA2016_125; WCOA2016_126; WCOA2016_127; WCOA2016_128; WCOA2016_129; WCOA2016_130; WCOA2016_131; WCOA2016_132; WCOA2016_133; WCOA2016_134; WCOA2016_135; WCOA2016_42; WCOA2016_43; WCOA2016_44; WCOA2016_45; WCOA2016_46; WCOA2016_47; WCOA2016_48; WCOA2016_49; WCOA2016_50; WCOA2016_51; WCOA2016_52; WCOA2016_53; WCOA2016_54; WCOA2016_55; WCOA2016_56; WCOA2016_57; WCOA2016_58; WCOA2016_59; WCOA2016_60; WCOA2016_61; WCOA2016_62; WCOA2016_63; WCOA2016_64; WCOA2016_65; WCOA2016_66; WCOA2016_67; WCOA2016_68; WCOA2016_69; WCOA2016_70; WCOA2016_71; WCOA2016_72; WCOA2016_73; WCOA2016_74; WCOA2016_75; WCOA2016_76; WCOA2016_77; WCOA2016_78; WCOA2016_79; WCOA2016_80; WCOA2016_81; WCOA2016_82; WCOA2016_83; WCOA2016_84; WCOA2016_85; WCOA2016_86; WCOA2016_87; WCOA2016_88; WCOA2016_89; WCOA2016_90; WCOA2016_91; WCOA2016_92; WCOA2016_93; WCOA2016_94; WCOA2016_95; WCOA2016_96; WCOA2016_97; WCOA2016_98; WCOA2016_99; WCOA2016_Leg1; WCOA2016_Leg2
    Type: Dataset
    Format: text/tab-separated-values, 629 data points
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  • 5
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    PANGAEA
    In:  Supplement to: Bausch, Alexandra Renee; Gallego, M Angeles; Harianto, Januar; Thibodeau, Patricia; Bednaršek, Nina; Havenhand, Jonathan N; Klinger, Terrie (2018): Influence of bacteria on shell dissolution in dead gastropod larvae and adult Limacina helicina pteropods under ocean acidification conditions. Marine Biology, 165(2), https://doi.org/10.1007/s00227-018-3293-3
    Publication Date: 2024-03-15
    Description: Ocean acidification (OA) increases aragonite shell dissolution in calcifying marine organisms. It has been proposed that bacteria associated with molluscan shell surfaces in situ could damage the periostracum and reduce its protective function against shell dissolution. However, the influence of bacteria on shell dissolution under OA conditions is unknown. In this study, dissolution in dead shells from gastropod larvae and adult pteropods (Limacina helicina) was examined following a 5-day incubation under a range of aragonite saturation states (Ωarag; values ranging from 0.5 to 1.8) both with and without antibiotics. Gastropod and pteropod specimens were collected from Puget Sound, Washington (48°33′19″N, 122°59′49″W and 47°41′11″N, 122°25′23″W, respectively), preserved, stored, and then treated in August 2015. Environmental scanning electron microscopy (ESEM) was used to determine the severity and extent of dissolution, which was scored as mild, severe, or summed (mild + severe) dissolution. Shell dissolution increased with decreasing Ωarag. In gastropod larvae, there was a significant interaction between the effects of antibiotics and Ωarag on severe dissolution, indicating that microbes could mediate certain types of dissolution among shells under low Ωarag. In L. helicina, there were no significant interactions between the effects of antibiotics and Ωarag on dissolution. These findings suggest that bacteria may differentially influence the response of some groups of shelled planktonic gastropods to OA conditions. This is the first assessment of the microbial–chemical coupling of dissolution in shells of either gastropod larvae or adult L. helicina under OA.
    Keywords: Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Aragonite saturation state, standard deviation; Bicarbonate ion; Bottles or small containers/Aquaria (〈20 L); Calcification/Dissolution; Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Coast and continental shelf; Event label; EXP; Experiment; Experiment duration; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Laboratory experiment; Limacina helicina; Mollusca; North Pacific; OA-ICC; Ocean Acidification International Coordination Centre; Other; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; Percentage; pH; pH, standard deviation; Puget_Sound_OA; Registration number of species; Replicates; Salinity; Salinity, standard deviation; San_Juan_Channel; Single species; Species; Temperate; Temperature, water; Temperature, water, standard deviation; Treatment; Type; Uniform resource locator/link to reference; Zooplankton
    Type: Dataset
    Format: text/tab-separated-values, 1754 data points
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  • 6
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    Unknown
    PANGAEA
    In:  Supplement to: Bednaršek, Nina; Tarling, Geraint A; Bakker, Dorothee C E; Fielding, Sophie; Cohen, Anne L; Kuzirian, Alan; McCorkle, Daniel C; Lézé, Bertrand; Montagna, Roberto (2012): Description and quantification of pteropod shell dissolution: A sensitive bioindicator of ocean acidification. Global Change Biology, 18(7), 2378-2388, https://doi.org/10.1111/j.1365-2486.2012.02668.x
    Publication Date: 2024-03-15
    Description: Anthropogenic ocean acidification is likely to have negative effects on marine calcifying organisms, such as shelled pteropods, by promoting dissolution of aragonite shells. Study of shell dissolution requires an accurate and sensitive method for assessing shell damage. Shell dissolution was induced through incubations in CO2 enriched seawater for between 4 and 14 days. We describe a procedure that allows the level of dissolution to be assessed and classified into three main types: Type I with partial dissolution of the prismatic layer; Type II with exposure of underlying crossed-lamellar layer, and Type III, where crossed-lamellar layer shows signs of dissolution. Levels of dissolution showed a good correspondence to the incubation conditions, with the most severe damage found in specimens held for 14 d in undersaturated condition (Ohm ~ 0.8). This methodology enables the response of small pelagic calcifiers to acidified conditions to be detected at an early stage, thus making pteropods a valuable bioindicator of future ocean acidification.
    Keywords: Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Antarctic; Aragonite saturation state; Aragonite saturation state, standard deviation; Bicarbonate ion; Bicarbonate ion, standard deviation; Bottles or small containers/Aquaria (〈20 L); Calcification/Dissolution; Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbonate ion; Carbonate ion, standard deviation; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, partial pressure, standard deviation; Coulometric titration; Dissolution rate; Dissolution rate, standard deviation; EPOCA; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; Experimental treatment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Individuals, non-dissolving; Individuals, non-dissolving, standard-deviation; Laboratory experiment; Limacina helicina antarctica; Mollusca; OA-ICC; Ocean Acidification International Coordination Centre; Open ocean; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; pH, standard deviation; Phosphate; Polar; Salinity; Scanning electron microscope (SEM); Silicate; Single species; Species; Temperature, water; Time, incubation; Titration potentiometric; Zooplankton
    Type: Dataset
    Format: text/tab-separated-values, 188 data points
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  • 7
    Publication Date: 2024-03-15
    Description: The pteropod Limacina helicina frequently experiences seasonal exposure to corrosive conditions (Omega arag  〈 1) along the US West Coast and is recognized as one of the species most susceptible to ocean acidification (OA). Yet, little is known about their capacity to acclimatize to such conditions. We collected pteropods in the California Current Ecosystem (CCE) that differed in the severity of exposure to Omega arag conditions in the natural environment. Combining field observations, high-CO2 perturbation experiment results, and retrospective ocean transport simulations, we investigated biological responses based on histories of magnitude and duration of exposure to Omega arag  〈 1. Our results suggest that both exposure magnitude and duration affect pteropod responses in the natural environment. However, observed declines in calcification performance and survival probability under high CO2 experimental conditions do not show acclimatization capacity or physiological tolerance related to history of exposure to corrosive conditions. Pteropods from the coastal CCE appear to be at or near the limit of their physiological capacity, and consequently, are already at extinction risk under projected acceleration of OA over the next 30 years. Our results demonstrate that Omega arag  exposure history largely determines pteropod response to experimental conditions and is essential to the interpretation of biological observations and experimental results.
    Keywords: Alkalinity, total; Animalia; Aragonite saturation state; Bicarbonate ion; Bottles or small containers/Aquaria (〈20 L); Calcification/Dissolution; Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Coast and continental shelf; Date; Experiment; Field observation; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Identification; Individuals; Intensity; Laboratory experiment; Limacina helicina; Mollusca; Mortality/Survival; North Pacific; OA-ICC; Ocean Acidification International Coordination Centre; Oxygen; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; Phosphate; Proportion; Registration number of species; Salinity; Silicate; Single species; Species; Station label; Survival; Temperate; Temperature, water; Treatment; Type; Uniform resource locator/link to reference; Upwelling; Zooplankton
    Type: Dataset
    Format: text/tab-separated-values, 2721 data points
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  • 8
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    Unknown
    PANGAEA
    In:  Supplement to: Bednaršek, Nina; Tarling, Geraint A; Bakker, Dorothee C E; Fielding, Sophie; Jones, Elizabeth M; Venables, H J; Ward, Peter; Kuzirian, Alan; Lézé, Bertrand; Feely, Richard A; Murphy, Eugene J (2012): Extensive dissolution of live pteropods in the Southern Ocean. Nature Geoscience, 5(12), 881-885, https://doi.org/10.1038/ngeo1635
    Publication Date: 2024-03-15
    Description: The carbonate chemistry of the surface ocean is rapidly changing with ocean acidification, a result of human activities. In the upper layers of the Southern Ocean, aragonite-a metastable form of calcium carbonate with rapid dissolution kinetics-may become undersaturated by 2050. Aragonite undersaturation is likely to affect aragonite-shelled organisms, which can dominate surface water communities in polar regions. Here we present analyses of specimens of the pteropod Limacina helicina antarctica that were extracted live from the Southern Ocean early in 2008. We sampled from the top 200 m of the water column, where aragonite saturation levels were around 1, as upwelled deep water is mixed with surface water containing anthropogenic CO2. Comparing the shell structure with samples from aragonite-supersaturated regions elsewhere under a scanning electron microscope, we found severe levels of shell dissolution in the undersaturated region alone. According to laboratory incubations of intact samples with a range of aragonite saturation levels, eight days of incubation in aragonite saturation levels of 0.94-1.12 produces equivalent levels of dissolution. As deep-water upwelling and CO2 absorption by surface waters is likely to increase as a result of human activities, we conclude that upper ocean regions where aragonite-shelled organisms are affected by dissolution are likely to expand.
    Keywords: Alkalinity, total; Animalia; Antarctic; Aragonite saturation state; Bicarbonate ion; Bottles or small containers/Aquaria (〈20 L); Calcification/Dissolution; Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Coulometric titration; Dissolution level; EXP; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Incubation duration; Laboratory experiment; Limacina helicina; Mollusca; OA-ICC; Ocean Acidification International Coordination Centre; Open ocean; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; Percentage; Percentage, standard deviation; pH; Phosphate; Polar; Potentiometric titration; Salinity; Scotia_OA; Silicate; Single species; Species; Station label; Temperature, water; Time point, descriptive; Zooplankton
    Type: Dataset
    Format: text/tab-separated-values, 904 data points
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  • 9
    Publication Date: 2024-03-30
    Description: Global change is impacting the oceans in an unprecedented way with resulting changes in species distributions or species loss. There is increasing evidence that multiple environmental stressors act together to constrain species habitat more than expected from single stressor. Here, we conducted a comprehensive study of the combined impact of ocean warming and acidification (OWA) on a global distribution of pteropods, ecologically important pelagic calcifiers and an indicator species for ocean change. We co-validated three different approaches to evaluate the impact of OWA on pteropod survival and distribution. First, we used co-located physical, chemical, and biological data from oceanographic cruises and regional time-series; second, we conducted multifactorial experimental incubations using OWA to evaluate survival; and third, we validated pteropod distributions using global carbonate chemistry and observation datasets. Habitat suitability indices and global distributions suggest that a multi-stressor framework is essential for understanding distributions of this pelagic calcifier.
    Keywords: Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Aragonite saturation state, standard deviation; Bicarbonate ion; Bicarbonate ion, standard deviation; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calcite saturation state, standard deviation; Calculated using seacarb after Nisumaa et al. (2010); Calculated using seacarb after Orr et al. (2018); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbonate ion; Carbonate ion, standard deviation; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, standard deviation; Coast and continental shelf; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Fugacity of carbon dioxide in seawater, standard deviation; Laboratory experiment; Limacina helicina; Mollusca; Mortality; Mortality, standard deviation; Mortality/Survival; North Pacific; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; pH, standard deviation; Phosphate; Phosphate, standard deviation; Replicates; Salinity; Salinity, standard deviation; Silicate; Silicate, standard deviation; Single species; Species, unique identification; Species, unique identification (Semantic URI); Species, unique identification (URI); Temperate; Temperature; Temperature, water; Temperature, water, standard deviation; Treatment; Type; Zooplankton
    Type: Dataset
    Format: text/tab-separated-values, 160 data points
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  • 10
    Publication Date: 2024-04-20
    Description: The present datasets are those used and generated by: Knecht et al. (2023). The .csv files contain georeferenced observations of abundances and biomass of shelled pteropods and planktic foraminifera (determined at various taxonomic levels). Two README documents describe the way these were implemented from previous zooplankton data syntheses, ongoing plankton monitoring programs and more recent oceanographic cruises. Two NetCDF (.nc) contain the depth-resolved monthly climatologies of shelled pteropods and foraminifera biomasses. The two other NetCDF contain the global estimates of Mean/Median/Min/Max/Stdev biomass concentrations for shelled pteropods and foraminifera for the surface ocean. These global estimates were obtained through an ensemble of biomass distribution models that is extensively described in Knecht et al. (see preprint cited above). This project has received funding from the European Union's Horizon 2020 research and innovation programme under grant agreement no. 862923. This output reflects only the author's view, and the European Union cannot be held responsible for any use that may be made of the information contained therein.
    Keywords: AtlantECO; Atlantic ECOsystems assessment, forecasting & sustainability; Biomass; Calcifying plankton; Carbonate counter pump; Comment; CSV text file; CSV text file (File Size); Documentation file; Documentation file (File Size); Foraminifera; Global Ocean; Model output, NetCDF format; Model output, NetCDF format (File Size); netCDF file; netCDF file (File Size); Pteropods; Zooplankton
    Type: Dataset
    Format: text/tab-separated-values, 10 data points
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