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  • PANGAEA  (29)
  • Frontiers Media  (1)
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  • 1
  • 2
    Publication Date: 2023-01-13
    Description: Planktic and benthic foraminifera iodine (I) to calcium (Ca) molar ratios have been proposed as an exciting new proxy to assess subsurface and bottom water oxygenation in the past. Compared to trace metals, the analysis of iodine in foraminifera calcite is more challenging, as iodine is volatile in acid solution. Here we compare previous analyses that use tertiary amine with alternative analyses using tetramethylammonium hydroxide (TMAH) and ammonium hydroxide (NH4OH). In addition, we assess the effect of sample size and cleaning on planktic and benthic foraminiferal I/Ca. Our stabilization experiments with TMAH and NH4OH show similar trends as those using tertiary amine, giving relatively low I/Ca ratios for planktic and benthic foraminifera samples from locations with either poorly oxygenated subsurface waters or bottom waters, and high ratios for locations characterized by well oxygenated subsurface or bottom waters. This suggests that both alternative methods are suitable to stabilize iodine initially dissolved in acid. In terms of number of planktic foraminifera analyzed, our results show a wide spread in I/Ca when samples contain 5 to 10 specimens. Samples containing 20 specimens or more show I/Ca values centered around the average of the smaller samples, indicated that the larger sample sizes are more representative of the average planktic foraminifera sample community. The impact of cleaning on planktic and benthic foraminifera I/Ca ratios is very similar to Mg/Ca, with the largest effect occurring during the clay removal step. Largest iodine contaminations were recorded at locations characterized by moderate to high organic carbon contents. We recommend doubling the oxidative cleaning step (4 instead of 2 steps) to ensure that all organic material is removed.
    Keywords: benthic and planktic foraminifera I/Ca; I/Ca cleaning method; iodine stabilization
    Type: Dataset
    Format: application/zip, 2 datasets
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  • 3
    Publication Date: 2023-01-13
    Keywords: Aluminium/Calcium ratio; Aluminium detection limit/Calcium ratio; benthic and planktic foraminifera I/Ca; I/Ca cleaning method; Iodine/Calcium ratio; Iodine detection limit/Calcium ratio; iodine stabilization; Iron/Calcium ratio; Iron detection limit/Calcium ratio; Magnesium/Calcium ratio; Magnesium detection limit/Calcium ratio; Sample ID; Species; Treatment
    Type: Dataset
    Format: text/tab-separated-values, 969 data points
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  • 4
    Publication Date: 2023-07-11
    Keywords: 115-709A; 117-720A; 172-1057A; 177-1088C; 177-1090A; 202-1242A; 303-U1308C; Arabian Sea; BC; benthic and planktic foraminifera I/Ca; BOFS11896#1; BOFS14K; Box corer; Carolina Slope, North Atlantic Ocean; CD159; Charles Darwin; D184; Depth, bottom/max; DEPTH, sediment/rock; Depth, top/min; Discovery (1962); DRILL; Drilling/drill rig; Elevation of event; Event label; Exp303; I/Ca cleaning method; Iodine/Calcium ratio; iodine stabilization; Joides Resolution; KAL; Kasten corer; Latitude of event; Leg115; Leg117; Leg172; Leg177; Leg202; Longitude of event; North Atlantic Climate 1; Northeast Atlantic; North Pacific Ocean; Number of individuals; RAPiD-06-3B; Sample code/label; Size fraction; South Atlantic Ocean; South Indian Ridge, South Indian Ocean; South of Iceland; Species; Treatment
    Type: Dataset
    Format: text/tab-separated-values, 796 data points
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  • 5
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    PANGAEA
    In:  Supplement to: Glock, Nicolaas; Eisenhauer, Anton; Liebetrau, Volker; Wiedenbeck, M; Hensen, Christian; Nehrke, Gernot (2012): EMP and SIMS studies on Mn/Ca and Fe/Ca systematics in benthic foraminifera from the Peruvian OMZ: a contribution to the identification of potential redox proxies and the impact of cleaning protocols. Biogeosciences, 9, 341-359, https://doi.org/10.5194/bg-9-341-2012
    Publication Date: 2023-10-28
    Description: In this study we present an initial dataset of Mn/Ca and Fe/Ca ratios in tests of benthic foraminifera from the Peruvian oxygen minimum zone (OMZ) determined with SIMS. These results are a contribution to a better understanding of the proxy potential of these elemental ratios for ambient redox conditions. Foraminiferal tests are often contaminated by diagenetic coatings, like Mn rich carbonate- or Fe and Mn rich (oxyhydr)oxide coatings. Thus, it is substantial to assure that the cleaning protocols are efficient or that spots chosen for microanalyses are free of contaminants. Prior to the determination of the element/Ca ratios, the distributions of several elements (Ca, Mn, Fe, Mg, Ba, Al, Si, P and S) in tests of the shallow infaunal species Uvigerina peregrina and Bolivina spissa were mapped with an electron microprobe (EMP). To visualize the effects of cleaning protocols uncleaned and cleaned specimens were compared. The cleaning protocol included an oxidative cleaning step. An Fe rich phase was found on the inner test surface of uncleaned U. peregrina specimens. This phase was also enriched in Al, Si, P and S. A similar Fe rich phase was found at the inner test surface of B. spissa. Specimens of both species treated with oxidative cleaning show the absence of this phase. Neither in B. spissa nor in U. peregrina were any hints found for diagenetic (oxyhydr)oxide or carbonate coatings. Mn/Ca and Fe/Ca ratios of single specimens of B. spissa from different locations have been determined by secondary ion mass spectrometry (SIMS). Bulk analyses using solution ICP-MS of several samples were compared to the SIMS data. The difference between SIMS analyses and ICP-MS bulk analyses from the same sampling sites was 14.0-134.8 µmol mol-1 for the Fe/Ca and 1.68(±0.41) µmol mol-1 for the Mn/Ca ratios. This is in the same order of magnitude as the variability inside single specimens determined with SIMS at these sampling sites (1sigma[Mn/Ca] = 0.35-2.07 µmol mol-1; 1sigma[Fe/Ca] = 93.9-188.4 µmol mol-1). The Mn/Ca ratios in the calcite were generally relatively low (2.21-9.93 µmol mol-1) but in the same magnitude and proportional to the surrounding pore waters (1.37-6.67 µmol mol-1). However, the Fe/Ca ratios in B. spissa show a negative correlation to the concentrations in the surrounding pore waters. Lowest foraminiferal Fe/Ca ratios (87.0-101.0 µmol mol-1) were found at 465 m water depth, a location with a strong sharp Fe peak in the pore water next to the sediment surface and respectively, high Fe concentrations in the surrounding pore waters. Previous studies found no living specimens of B. spissa at this location. All these facts hint that the analysed specimens already were dead before the Fe flux started and the sampling site just recently turned anoxic due to fluctuations of the lower boundary of the OMZ near the sampling site (465 m water depth). Summarized Mn/Ca and Fe/Ca ratios are potential proxies for redox conditions, if cleaning protocols are carefully applied. The data presented here may be rated as base for the still pending detailed calibration.
    Keywords: BIOACID; Biological Impacts of Ocean Acidification; Climate - Biogeochemistry Interactions in the Tropical Ocean; SFB754
    Type: Dataset
    Format: application/zip, 5 datasets
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  • 6
    Publication Date: 2023-10-28
    Description: Summary of all individual measurements for foraminiferal denitrification and oxygen repiration rates (individual and volume specific) and cell volumes, where Ind. refers to the number of individuals used for one incubation. The number of the sample (#) is used to distinguish between different samples from the same location. The metabolic rates were calculated from linear steady-state gradients of nitrous oxide or oxygen in glass microcapsules as described in Glock et al. (2019). In addition, total benthic foraminiferal denitrification rates from the Peruvian OMZ from Glock et al. (2013) were corrected according to species-specific rates measured within Glock et al. (2019) are uploaded as a seperate dataset.
    Keywords: Benthic foraminifera; Climate - Biogeochemistry Interactions in the Tropical Ocean; OMZ; Peru; SFB754
    Type: Dataset
    Format: application/zip, 3 datasets
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  • 7
    Publication Date: 2023-10-28
    Keywords: Benthic foraminifera; Climate - Biogeochemistry Interactions in the Tropical Ocean; DATE/TIME; DEPTH, water; Event label; Latitude of event; Longitude of event; M137; M137_735-1; M137_813-1; M137_825-1; M137_826-1; M137_838-1; M137_858-1; M137_870-1; Meteor (1986); Multicorer with television; Number; OMZ; Peru; Respiration rate, oxygen; Respiration rate, oxygen, per individual; Respiration rate, oxygen, standard deviation; Respiration rate, oxygen, standard error; Sample code/label; SFB754; Species; Standard deviation; TVMUC; Volume; Volume, standard error
    Type: Dataset
    Format: text/tab-separated-values, 242 data points
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  • 8
    Publication Date: 2023-10-28
    Keywords: Benthic foraminifera; Climate - Biogeochemistry Interactions in the Tropical Ocean; DATE/TIME; Denitrification rate, per individual; Denitrification rate, specific; DEPTH, water; Event label; Latitude of event; Longitude of event; M137; M137_606-1; M137_641-1; M137_681-1; M137_695-1; M137_734-1; M137_735-1; M137_756-1; M137_776-1; M137_788-1; M137_801-1; Meteor (1986); MUC 13; Multicorer with television; Number; OMZ; Peru; Sample code/label; SFB754; Species; Standard deviation; Standard error; TVMUC; Volume; Volume, standard error
    Type: Dataset
    Format: text/tab-separated-values, 364 data points
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  • 9
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    PANGAEA
    In:  Supplement to: Glock, Nicolaas; Schönfeld, Joachim; Eisenhauer, Anton; Hensen, Christian; Mallon, Jürgen; Sommer, Stefan (2013): The role of benthic foraminifera in the benthic nitrogen cycle of the Peruvian oxygen minimum zone. Biogeosciences, 10(7), 4767-4783, https://doi.org/10.5194/bg-10-4767-2013
    Publication Date: 2023-10-28
    Description: The discovery that foraminifera are able to use nitrate instead of oxygen as energy source for their metabolism has challenged our understanding of nitrogen cycling in the ocean. It was evident before that only prokaryotes and fungi are able to denitrify. Rate estimates of foraminiferal denitrification were very sparse on a regional scale. Here, we present estimates of benthic foraminiferal denitrification rates from six stations at intermediate water depths in and below the Peruvian oxygen minimum zone (OMZ). Foraminiferal denitrification rates were calculated from abundance and assemblage composition of the total living fauna in both, surface and subsurface sediments, as well as from individual species specific denitrification rates. A comparison with total benthic denitrification rates as inferred by biogeochemical models revealed that benthic foraminifera account for the total denitrification on the shelf between 80 and 250 m water depth. They are still important denitrifiers in the centre of the OMZ around 320 m (29-56% of the benthic denitrification) but play only a minor role at the lower OMZ boundary and below the OMZ between 465 and 700 m (3-7% of total benthic denitrification). Furthermore, foraminiferal denitrification was compared to the total benthic nitrate loss measured during benthic chamber experiments. Foraminiferal denitrification contributes 1 to 50% to the total nitrate loss across a depth transect from 80 to 700 m, respectively. Flux rate estimates ranged from 0.01 to 1.3 mmol m-2 d-1. Furthermore we show that the amount of nitrate stored in living benthic foraminifera (3 to 705 µmol L-1) can be higher by three orders of magnitude as compared to the ambient pore waters in near surface sediments sustaining an important nitrate reservoir in Peruvian OMZ sediments. The substantial contribution of foraminiferal nitrate respiration to total benthic nitrate loss at the Peruvian margin, which is one of the main nitrate sink regions in the world oceans, underpins the importance of previously underestimated role of benthic foraminifera in global biochemical cycles.
    Keywords: Climate - Biogeochemistry Interactions in the Tropical Ocean; SFB754
    Type: Dataset
    Format: application/zip, 6 datasets
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  • 10
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    PANGAEA
    In:  Supplement to: Glock, Nicolaas; Erdem, Zeynep; Wallmann, Klaus; Somes, Christopher J; Liebetrau, Volker; Schönfeld, Joachim; Gorb, Stanislav N; Eisenhauer, Anton (2018): Coupling of oceanic carbon and nitrogen facilitates spatially resolved quantitative reconstruction of nitrate inventories. Nature Communications, 9(1), https://doi.org/10.1038/s41467-018-03647-5
    Publication Date: 2024-03-06
    Description: Downcore data for core M77/2 52-2. PD is the mean pore density of Bolivina spissa for this depth. N is the number of specimens used for the pore density analysis in this sample. [NO3-]BW was calculated from the pore density of Bolivina spissa using eq. 3. δ18O and δ13C were measured on Uvigerina peregrina. δ15N was measured on bulk sediment.
    Keywords: AGE; Climate - Biogeochemistry Interactions in the Tropical Ocean; DEPTH, sediment/rock; Isotope ratio mass spectrometry; M77/2; M77/2_052-2; M77/2_733; Meteor (1986); Nitrate; Number; PC; Piston corer; Pore density; SFB754; Standard error; Uvigerina peregrina, δ13C; Uvigerina peregrina, δ18O; δ15N, bulk sediment
    Type: Dataset
    Format: text/tab-separated-values, 358 data points
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