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  • PANGAEA  (17)
  • Earth System Science Data
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  • 1
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    (Table 2) Abundance of Oncaea spp. and harpacticoid copepods and their potential degradation of fecal pellets during Leg 7 of Galathea 3 cruise (2011)
    PANGAEA
    Details
    Publication Date: 2023-08-28
    Keywords: Calculated after Koski et al. (2005); Event label; Fecal pellets, fractional degradation; Galathea_3/7-1; Galathea_3/7-15; Galathea_3/7-18; Galathea_3/7-23; Galathea_3/7-28; Galathea_3/7-33; Galathea_3/7-8; Galathea 3; Harpacticoida; Harpacticoida, abundance, integrated; HDMS Vaedderen; Indian Ocean; MULT; Multiple investigations; Oncaea spp.; Oncaea spp., abundance, integrated; Station label
    Type: Dataset
    Format: text/tab-separated-values, 63 data points
    Location Call Number Expected Availability
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    DATA PANGAEA
  • 2
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    (Table 1) Estimated fecal pellet sinking rate, production, turnover and retention during Leg 7 of Galathea 3 cruise (2011)
    PANGAEA
    Details
    Publication Date: 2023-08-28
    Keywords: Calculated; Event label; Fecal pellet carbon, flux; Galathea_3/7-1; Galathea_3/7-15; Galathea_3/7-18; Galathea_3/7-23; Galathea_3/7-28; Galathea_3/7-33; Galathea_3/7-8; Galathea 3; HDMS Vaedderen; Indian Ocean; MULT; Multiple investigations; Percentage; Sinking velocity; Station label; Turnover rate
    Type: Dataset
    Format: text/tab-separated-values, 45 data points
    Location Call Number Expected Availability
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  • 3
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    Compilation of data to assess trophic interactions in mesopelagic food webs in the central and Northeast Atlantic, and in the Mediterranean Sea (2022)
    PANGAEA
    Details
    Publication Date: 2024-02-17
    Description: Mesopelagic organisms play a critical role in marine ecosystems, channelling energy and organic matter across food webs and serving as the primary prey for many open-ocean predators. Nevertheless, trophic pathways involving mesopelagic organisms are poorly understood and their contribution to food web structure remains difficult to assess (St. John et al., 2016). Existing data to assess mesopelagic feeding interactions and energy transfer are scattered in the literature or remain unpublished, making it difficult to locate and use such datasets. As part of the EU funded project SUMMER - Sustainable Management of Mesopelagic Resources H2020-BG-2018-2, GA: 817806) (https://summerh2020.eu/), we created MesopTroph, a georeferenced database of diet, trophic biogeochemical markers, and energy content of mesopelagic organisms and other marine taxa from the Northeast Atlantic and Mediterranean Sea, compiled from 191 published and non-published sources. MesopTroph includes seven datasets: (i) diet compositions from stomach content analysis, (ii) stable isotopes of carbon and nitrogen (δ13C and δ15N), (iii) fatty acid trophic markers (FATM), (iv) major and trace elements, (v) energy density, (vi) estimates of diet proportions, and (vii) trophic positions. The database contains information from 4918 samples, representing 51119 specimens from 499 species or genera, covering a wide range of trophic guilds and taxonomic groups. Metadata provided for each record include the location, dates and method of sample collection, taxonomic ranks (phylum, class, order, family), number and size (or size range) of sampled organisms, method/model used in data analysis, reference and DOI of the original data source. Compiled data were checked for errors, missing information, and to avoid duplicate entries, and scientific names and taxonomy were standardized.
    Keywords: diet composition; diet proportions; energy density; fatty acids; major and trace element data; Mediterranean; megafauna; mesopelagic food web; mesopelagic organisms; North Atlantic; Stable isotopes; Stomach contents; SUMMER; Sustainable Management of Mesopelagic Resources; trophic markers; trophic position
    Type: Dataset
    Format: application/zip, 7 datasets
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  • 4
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    Compilation of fatty acid composition of marine biota from the central and Northeast Atlantic, and the Mediterranean Sea (2022)
    PANGAEA
    Details
    Publication Date: 2024-02-27
    Description: Fatty acid (FA) composition has increasingly been used to estimate the dietary preference of marine organisms. Specific fatty acids and fatty acid ratios serve as trophic markers (FATM) and have the potential to provide insights on the long-term dietary preference of organisms. FATM have been applied for this purpose on various zooplankton, fish and up to whales. We aim to build up a database of new and published data on fatty acid content of mesopelagic fish and their predators from the central and Northeast Atlantic, and the Mediterranean Sea, to use in FATM food web studies, investigating the importance of mesopelagic organisms as predators and prey in the marine ecosystem. Here we compiled FA content (i.e., the proportion of each FA measured in sampled tissues or in the whole body of organisms in relation to total FAs analysed) of 36 fish species or genera, 15 seabirds, five marine mammals, two cephalopods, one turtle, one jelly fish, and one shark. For each record, we included all FAs with values above 0.1% of total FAs and report the percentage values as provided in the original data source. Each data record is associated with information on the sampling location, geographic coordinates, month and year of sample collection, method of sample collection, taxonomic ranks (phylum, class, order, family), number and size (or size range) of sampled organisms, as well as the reference and DOI of the original data source, for further details on the samples analysed and/or the analytical techniques used.
    Keywords: (9Z)-heptadec-9-enoic acid; (9Z)-heptadec-9-enoic acid, standard deviation; 12,15 Octadecadienoic acid of total fatty acids; 3,6,9,12 Hexadecatetraenoic acid of total fatty acids; 4,7,10,13,16-Docosapentaenoic acid; 6,9,12,15-Hexadecatetraenoic acid of total fatty acids; 6,9,12-Hexadecatrienoic acid of total fatty acids; 9,12-Hexadecadienoic acid of total fatty acids; 9-Tetradecenoic acid of total fatty acids; 9-Tetradecenoic acid of total fatty acids, standard deviation; Adriatic_Sea_comp; all-cis-11,14,17-Eicosatrienoic acid of total fatty acids; all-cis-11,14,17-Eicosatrienoic acid of total fatty acids, standard deviation; all-cis-11,14-Eicosadienoic acid of total fatty acids; all-cis-11,14-Eicosadienoic acid of total fatty acids, standard deviation; all-cis-11,14-Octadecadienoic acid of total fatty acids; all-cis-13,16,19-Docosatrienoic acid of total fatty acids; all-cis-3,6,9,12,15-Octadecapentaenoic acid of total fatty acids; all-cis-4,7,10,13,16,19-Docosahexaenoic acid of total fatty acids; all-cis-4,7,10,13,16,19-Docosahexaenoic acid of total fatty acids, standard deviation; all-cis-4,7,10,13,16-Docosapentaenoic acid, standard deviation; all-cis-5,8,11,14,17-Eicosapentaenoic acid of total fatty acids; all-cis-5,8,11,14,17-Eicosapentaenoic acid of total fatty acids, standard deviation; all-cis-5,8,11,14-Eicosatetraenoic acid of total fatty acids; all-cis-5,8,11,14-Eicosatetraenoic acid of total fatty acids, standard deviation; all-cis-6,9,12,15,18-Heneicosapentaenoic acid of total fatty acids; all-cis-6,9,12,15,18-Heneicosapentaenoic acid of total fatty acids, standard deviation; all-cis-6,9,12,15-Hexadecatetraenoic acid of total fatty acids, standard deviation; all-cis-6,9,12,15-Octadecatetraenoic acid of total fatty acids; all-cis-6,9,12,15-Octadecatetraenoic acid of total fatty acids, standard deviation; all-cis-6,9,12-Octadecatrienoic acid of total fatty acids; all-cis-6,9,12-Octadecatrienoic acid of total fatty acids, standard deviation; all-cis-7,10,13,16,19-Docosapentaenoic acid of total fatty acids; all-cis-7,10,13,16,19-Docosapentaenoic acid of total fatty acids, standard deviation; all-cis-7,10,13,16-Docosatetraenoic acid of total fatty acids; all-cis-7,10,13,16-Docosatetraenoic acid of total fatty acids, standard deviation; all-cis-7,10,13-Hexadecatrienoic acid of total fatty acids; all-cis-7,10-Hexadecadienoic acid of total fatty acids; all-cis-8,11,14,17-Eicosatetraenoic acid of total fatty acids; all-cis-8,11,14,17-Eicosatetraenoic acid of total fatty acids, standard deviation; all-cis-8,11,14-Eicosatrienoic acid of total fatty acids; all-cis-8,11,14-Eicosatrienoic acid of total fatty acids, standard deviation; all-cis-9,12,15-Hexadecadienoic acid of total fatty acids; all-cis-9,12,15-Octadecatrienoic acid of total fatty acids; all-cis-9,12,15-Octadecatrienoic acid of total fatty acids, standard deviation; all-cis-9,12-Hexadecadienoic acid of total fatty acids, standard deviation; all-cis-9,12-Hexadecatrienoic acid of total fatty acids, standard deviation; all-cis-9,12-Octadecadienoic acid of total fatty acids; all-cis-9,12-Octadecadienoic acid of total fatty acids, standard deviation; Azores_comp; Balearic_Sea_comp; Barbate_comp; Barents_Sea_comp; Canary_Islands_comp; Cape_Verde_comp; Catalonian_Sea_comp; Central_Northeastern_Atlantic_comp; Cephalopods; cis-10-Heptadecenoic acid of total fatty acids; cis-10-Heptadecenoic acid of total fatty acids, standard deviation; cis-11-Docosenoic acid of total fatty acids; cis-11-Docosenoic acid of total fatty acids, standard deviation; cis-11-Hexadecenoic acid of total fatty acids, standard deviation; cis-11-Hexadecenoic acid of total fatty acids (IUPAC: (11Z)-hexadec-11-enoic acid); cis-11-Icosenoic acid of total fatty acids; cis-11-Icosenoic acid of total fatty acids, standard deviation; cis-11-Octadecenoic acid of total fatty acids, standard deviation; cis-11-Octadecenoic acid of total fatty acids (IUPAC: Octadec-11-enoic acid); cis-13-Docosenoic acid of total fatty acids; cis-13-Docosenoic acid of total fatty acids, standard deviation; cis-13-Icosenoic acid of total fatty acids; cis-13-Icosenoic acid of total fatty acids, standard deviation; cis-13-Octadecenoic acid of total fatty acids; cis-13-Octadecenoic acid of total fatty acids, standard deviation; cis-15-Docosenoic acid of total fatty acids; cis-15-Docosenoic acid of total fatty acids, standard deviation; cis-15-Tetracosenoic acid of total fatty acids; cis-15-Tetracosenoic acid of total fatty acids, standard deviation; cis-7-Hexadecenoic acid of total fatty acids; cis-7-Hexadecenoic acid of total fatty acids, standard deviation; cis-9-Hexadecenoic acid of total fatty acids, standard deviation; cis-9-Hexadecenoic acid of total fatty acids (IUPAC: (9Z)-hexadec-9-enoic acid); cis-9-Icosanoic acid of total fatty acids; cis-9-Icosanoic acid of total fatty acids, standard deviation; cis-9-Octadecenoic acid of total fatty acids (IUPAC: Octadec-9-enoic acid); Class; Comment; Decanoic acid of total fatty acids; DEPTH, water; Docosanoic acid, standard deviation; Docosanoic acid of total fatty acids; Dodecanoic acid of total fatty acids; Dodecanoic acid of total fatty acids, standard deviation; dolphins; Ebro_Delta_comp; elasmobranchs; Event label; Family; fatty acids; Finnmark_comp; Gear; Heptadecanoic acid, standard deviation; Heptadecanoic acid of total fatty acids; Hexadecadienoic acid of total fatty acids; Hexadecanoic acid, standard deviation; Hexadecanoic acid of total fatty acids; Hexadecatetraenoic acid of total fatty acids; Hexadecatetraenoic acid of total fatty acids, standard deviation; Hexadecatrienoic acid of total fatty acids; Hexadecatrienoic acid of total fatty acids, standard deviation; Hexadecenoic acid of total fatty acids; Icosanoic acid, standard deviation; Icosanoic acid of total fatty acids; Institution; Investigator; Irminger_Sea_comp; Isle_of_May_comp; Jellyfish; LATITUDE; Lipids, per total wet mass; Location; Lofoten_Vesteralen_comp; LONGITUDE; Madeira_comp; marine mammals; Mauritania_comp; mesopelagic fish; mesopelagic food web; Mid_North_Atlantic_comp; Month; North_Sea_comp; Norwegian_Sea_North_comp; Number of individuals; Ocean and sea region; Octadec-7-enoic acid of total fatty acids; Octadec-7-enoic acid of total fatty acids, standard deviation; Octadec-9-enoic acid, standard deviation; Octadecanoic acid, standard deviation; Octadecanoic acid of total fatty acids; Octadecatetraenoic acid 18:4(n-4) of total fatty acids; Octadecenoic acid of total fatty acids; Order; Organisms; Pentadecanoic acid, standard deviation; Pentadecanoic acid of total fatty acids; Persistent Identifier; Phylum; Raso_Islet_Cape_Verde_comp; Record number; Reference/source; Replicates; Reykjanes_Ridge_comp; Seabirds; Size; Spanish_coast_comp; Spitsbergen_Bear_Island_comp; SUMMER; Sustainable Management of Mesopelagic Resources; Svalbard_comp; Taxon/taxa; Taxon/taxa, unique identification (Semantic URI); Taxon/taxa, unique identification (URI); Tetracosanoic acid, standard deviation; Tetracosanoic acid of total fatty acids; Tetradecanoic acid, standard deviation; Tetradecanoic acid of total fatty acids; trophic markers; Tropic_Seamount_comp; Wet mass; Year of observation
    Type: Dataset
    Format: text/tab-separated-values, 16550 data points
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  • 5
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    Global compilation of stable carbon (δ13C) and nitrogen (δ15N) isotope values of meso- and bathypelagic fish (2023)
    PANGAEA
    Details
    Publication Date: 2024-03-02
    Description: Stable isotope analysis (SIA) has emerged as a valuable tool for understanding the trophic structure of the marine food web and gaining insights into trophic levels and niche. Researchers are increasingly utilizing SIA in studies focused on feeding ecology, particularly in estimating the long-term diets of meso- and bathypelagic fish. To facilitate this research, a global database of published data on stable isotopes, specifically δ13C and δ15N, of meso- and bathypelagic fish was created. The database was constructed by conducting a thorough search on Google Scholar and reviewing the references cited in the retrieved papers. The search primarily involved using popular terms such as stable isotope analysis or feeding ecology in combination with mesopelagic or bathypelagic fish. The resulting SIA database contains δ13C and δ15N values for 95 different species of meso- and bathypelagic fish, belonging to 27 families, with specimens collected between 2004 and 2015. Each entry in the database includes information on the sampling location, month and year of sample collection, taxonomic classifications (phylum, class, order, family), number of samples analyzed, as well as the reference and DOI of the original data source. This global SIA database holds significant potential as a valuable tool and data source for conducting large-scale meta-analyses.
    Keywords: Actinopteri, standard length; Actinopteri, standard length, standard deviation; Actinopteri, total length; bathypelagic fish; Carbon/Nitrogen ratio; Carbon/Nitrogen ratio, standard deviation; Class; Comment; Family; Food web; Institution; Investigator; LATITUDE; Location; LONGITUDE; Mean values; mesopelagic fish; Month; Number of individuals; Ocean and sea region; Order; Organisms; Persistent Identifier; Phylum; Record number; Reference/source; stable isotope analysis; SUMMER; Sustainable Management of Mesopelagic Resources; Taxon/taxa; Taxon/taxa, unique identification; Taxon/taxa, unique identification (Semantic URI); Taxon/taxa, unique identification (URI); trophic level; Trophic level; Trophic level, standard deviation; Year of observation; δ13C; δ13C, standard deviation; δ15N; δ15N, standard deviation
    Type: Dataset
    Format: text/tab-separated-values, 5907 data points
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    DATA PANGAEA
  • 6
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    Fecal pellet and egg production rates of copepod species at varying suspended sediment concentrations (2011)
    PANGAEA
    In:  Supplement to: Arendt, Kristine Engel; Dutz, Jörg; Jónasdóttir, Sigrún Huld; Jung-Madsen, Signe; Mortensen, John; Møller, Eva Friis; Nielsen, Torkel Gissel (2011): Effects of suspended sediments on copepods feeding in a glacial influenced sub-Arctic fjord. Journal of Plankton Research, 33(10), 1526-1537, https://doi.org/10.1093/plankt/fbr054
    Details
    Publication Date: 2024-01-17
    Description: We investigated the effect of suspended sediments on the vital rates of the copepods Calanus finmarchicus, Pseudocalanus sp. and Metridia longa in a Greenland sub-Arctic fjord. The fjord had a gradient of suspended particulate matter (SPM) with high concentrations (〉50 mg/L) in the inner fjord due to glacial melt water runoff. Laboratory experiments showed that when feeding on the diatom Thalassiosira weissflogii specific ingestion rates were low at high concentrations of suspended sediment for C. finmarchicus (〉20 mg/L) and Pseudocalanus sp. (〉50 mg/L), while no effect was found for M. longa. For C. finmarchicus, a relatively constant fecal pellet production (FPP) and fecal pellet volume suggested ingestion of sediment, which probably led to reduction in egg production rates (EPRs) at high sediment concentrations. For Pseudocalanus sp., FPP decreased with increasing sediment concentrations, while no effect was observed on EPR. No significant difference was observed in FPP for M. longa feeding on the diatom T. weissflogii compared to the ciliate Strombidium sulcatum. The study shows that high sediment concentrations influence the capability of carbon turnover in C. finmarchicus and Pseudocalanus sp., while M. longa appears to be more tolerant to high sediment loads. Therefore, high concentrations of SPM could potentially influence the species composition of glacially influenced fjords.
    Keywords: International Polar Year (2007-2008); IPY
    Type: Dataset
    Format: application/zip, 2 datasets
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  • 7
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    (Table I) Fecal pellet production of three copepod species during feeding experiments with different sediment concentrations (2011)
    PANGAEA
    Details
    Publication Date: 2024-01-17
    Keywords: Adolf Jensen; AJ_200605; AJ_GF7; Calanus finmarchicus, fecal pellet production per individual; Fecal pellet production rate, standard deviation; Feeding experiment; FX; Godthåbsfjord, West Greenland; Metridia longa, fecal pellet production per individual; MULT; Multiple investigations; Pseudocalanus sp., fecal pellet production per individual; Sample amount, subset; Suspended particulate matter
    Type: Dataset
    Format: text/tab-separated-values, 82 data points
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  • 8
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    (Table II) Egg production of three copepod species during feeding experiments with different sediment concentrations (2011)
    PANGAEA
    Details
    Publication Date: 2024-01-17
    Keywords: Adolf Jensen; AJ_200605; AJ_GF7; Copepoda, eggs per female; Egg production rate, standard deviation; Feeding experiment; FX; Godthåbsfjord, West Greenland; MULT; Multiple investigations; Pseudocalanus sp., eggs per female; Sample amount; Sample amount, subset; Standard deviation; Suspended particulate matter
    Type: Dataset
    Format: text/tab-separated-values, 68 data points
    Location Call Number Expected Availability
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  • 9
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    Egg production, hatching, faecal pellet production of Calanus finmarchicus in the North Atlantic (2013)
    PANGAEA
    Details
    Publication Date: 2024-02-16
    Description: The samples were collected using a T-80 net (375 µm mesh size) equipped with a non-filtering cod-end in the North Atlantic during the G.O. Sars Trans-Atlantic cruise in 2013. Within 15-30 minutes after the recovery, 20 Calanus finmarchicus females were sorted out under microscope in ice chilled petri dishes and incubated individually in 600 ml polycarbonate culture bottles resulting in 20 replicate measurements. The bottles were filled with 50 µm screened seawater originated from 6 m water depth. The samples were incubated upright in thermoroom for 24 hours at the surface temperature (3°C). After the samples had been filtered (40 µm filter), female prosome length, egg as well as pellet abundance were determined. Subsequently, eggs from six females were incubated in petri dishes at 5°C. After 4 days, the number of nauplii and eggs were counted in order to calculate hatching success.
    Keywords: Basin Scale Analysis, Synthesis and Integration; Calanus finmarchicus, egg production rate per individual; Calanus finmarchicus, fecal pellet production per individual; Calanus finmarchicus, female, prosome length; Calanus finmarchicus, hatching success; Date/Time of event; EURO-BASIN; Event label; G. O. Sars (2003); GS13/107; GS13/107_173_T-80; GS13/107_174_T-80; GS13/107_175_T-80; GS13/107_176_T-80; GS13/107_177_T-80; GS13/107_179_T-80; GS13/107_181_T-80; GS13/107_183_T-80; GS13/107_184_T-80; GS13/107_185_T-80; GS13/107_186_T-80; GS13/107_187_T-80; GS13/107_191_T-80; GS13/107_192_T-80; GS13/107_194_T-80; GS13/107_196_T-80; GS13/107_199_T-80; GS13/107_201_T-80; GS13/107_207_T-80; GS13/107_209_T-80; Latitude of event; Longitude of event; North Atlantic; Norwegian Trans Atlantic Cruise; Standard error; Station 173; Station 174; Station 175; Station 176; Station 177; Station 179; Station 181; Station 183; Station 184; Station 185; Station 186; Station 187; Station 191; Station 192; Station 194; Station 196; Station 199; Station 201; Station 207; Station 209; T-80; T-80 net, 375 µm mesch size
    Type: Dataset
    Format: text/tab-separated-values, 156 data points
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  • 10
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    (Table 1) 100 m integrated temperature, chlorophyll a content and protist biomass during Leg 7 of Galathea 3 cruise (2006) (2013)
    PANGAEA
    In:  Supplement to: Jónasdóttir, Sigrún Huld; Nielsen, Torkel Gissel; Borg, Christian Marc A; Møller, Eva Friis; Jakobsen, Hans Henrik; Satapoomin, Suree (2013): Biological oceanography across the Southern Indian Ocean - basin scale trends in the zooplankton community. Deep Sea Research Part I: Oceanographic Research Papers, 75, 16-27, https://doi.org/10.1016/j.dsr.2013.01.011
    Details
    Publication Date: 2023-12-13
    Description: We present a study on the protozooplankton 〉5 µm and copepods larger than 50 µm at a series of contrasting stations across the Southern Indian Ocean (SIO). Numerically, over 80% of the copepod community across the transect was less than 650 µm in size, dominated by nauplii, and smaller copepods, while 80% of the biomass (as mg C/m**3) was larger than 1300 µm in body length. Predation by the carnivorous copepod Corycaeus sp. was estimated to be able to remove up to 2% /d of the copepods 〈1000 µm in size. By the help of grazing models we estimated that primary producers were mainly grazed upon by ciliates and heterotrophic dinoflagellates (40-80% /d combined) in temperate waters but appendicularians became increasingly important in the tropical waters grazing about 40% of the biomass per day. Despite their high abundance and biomass, copepods contributed less than 20% of the grazing at most stations. Secondary production was low (carbon specific egg production 〈0.14 /d) but typical for food limited oligotrophic oceans.
    Keywords: Chlorophyll a, areal concentration; Chlorophyll a, standard deviation; Copepoda, biomass as carbon, integrated; DATE/TIME; Depth, bottom/max; Depth, top/min; Event label; Galathea_3/7-1; Galathea_3/7-15; Galathea_3/7-18; Galathea_3/7-23; Galathea_3/7-28; Galathea_3/7-33; Galathea_3/7-8; Galathea 3; HDMS Vaedderen; Indian Ocean; International Polar Year (2007-2008); IPY; Latitude of event; Longitude of event; MULT; Multiple investigations; Protista, biomass as carbon; Standard deviation; Temperature, water; Temperature, water, standard deviation
    Type: Dataset
    Format: text/tab-separated-values, 77 data points
    Location Call Number Expected Availability
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    DATA PANGAEA
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