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  • 1
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    Same stock, different management: quantifying the sustainability of three shrimp fisheries in the Skagerrak from a product perspective (2016)
    Oxford University Press
    Details
    Publication Date: 2016-07-27
    Description: The northern shrimp ( Pandalus borealis L.) stock in the Skagerrak is shared by Sweden, Norway, and Denmark. Although the fishery is regulated by an annual agreement between the EU and Norway, there are also national regulations as well as differences in fleet composition and shrimp markets. In early 2014, the World Wildlife Fund gave all Skagerrak shrimp a red light in their seafood consumer guide, which led to an extensive debate, especially in Sweden, about the sustainability of this fishery. The aim of this study was to quantify a set of indicators that together give a broad picture of the sustainability of the three fisheries to provide an objective basis for a discussion on needed measures. The different indicators concerned environmental, economic or social aspects of sustainability and were quantified per tonne of shrimp landed by each country in 2012. The Danish fishery was most efficient in terms of environmental and economic indicators, while the Swedish fishery provided most employment per tonne of shrimp landed. Fuel use in all fisheries was high, also when compared with other shrimp fisheries. Interesting patterns emerged, with smaller vessels being more fuel efficient than larger ones in Sweden and Norway, with the opposite trend in Denmark. The study also demonstrated major data gaps and differences between the countries in how data are collected and made available. Various improvement options in the areas data collection and publication, allocation of quotas and enforcement of regulations resulted. Product-oriented studies could be useful to follow-up performance of fisheries over time and to identify how to best utilize the Skagerrak shrimp stock. This could involve evaluating novel solutions in terms of technology and management, based on current and future scenarios aiming to maximize societal benefits generated from this limited resource, at minimized environmental impacts.
    Print ISSN: 1054-3139
    Electronic ISSN: 1095-9289
    Topics: Biology , Geosciences , Physics
    Published by Oxford University Press
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  • 2
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    A stochastic model for palaeomagnetic field variations (2013)
    Oxford University Press
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    Publication Date: 2013-09-10
    Description: Regeneration of the Earth's magnetic field by convection in the liquid core produces a broad spectrum of time variation. Relative palaeointensity measurements in marine sediments provide a detailed record over the past 2 Myr, but an explicit reconstruction of the underlying dynamics is not feasible. A more practical alternative is to construct a stochastic model from estimates of the virtual axial dipole moment. The deterministic part of the model (drift term) describes time-averaged behaviour, whereas the random part (diffusion term) characterizes complex interactions over convective timescales. We recover estimates of the drift and diffusion terms from the SINT2000 model of Valet et al. and the PADM2M model of Ziegler et al. The results are used in numerical solutions of the Fokker–Planck equation to predict statistical properties of the palaeomagnetic field, including the average rates of magnetic reversals and excursions. A physical interpretation of the stochastic model suggests that the timescale for adjustments in the axial dipole moment is set by the dipole decay time d . We obtain d = 29 kyr from the stochastic models, which falls within the expected range for the Earth's core. We also predict the amplitude of convective fluctuations in the core, and establish a physical connection to the rates of magnetic reversals and excursions. Chrons lasting longer than 10 Myr are unlikely under present-day conditions. However, long chrons become more likely if the diffusion term is reduced by a factor of 2. Such a change is accomplished by reducing the velocity fluctuations in the core by a factor of 2, which could be attributed to a shift in the spatial pattern of heat flux from the core or a reduction in the total core heat flow.
    Print ISSN: 0956-540X
    Electronic ISSN: 1365-246X
    Topics: Geosciences
    Published by Oxford University Press on behalf of The Deutsche Geophysikalische Gesellschaft (DGG) and the Royal Astronomical Society (RAS).
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  • 3
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    The isometry group of the bounded Urysohn space is simple (2013)
    Oxford University Press
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    Publication Date: 2013-09-13
    Description: We show that the isometry group of the bounded Urysohn space is a simple group.
    Print ISSN: 0024-6093
    Electronic ISSN: 1469-2120
    Topics: Mathematics
    Published by Oxford University Press
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  • 4
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    Constraints on the richness-mass relation and the optical-SZE positional offset distribution for SZE-selected clusters (2015)
    Saro, A., Bocquet, S., Rozo, E., Benson, B. A., Mohr, J., Rykoff, E. S., Soares-Santos, M., Bleem, L., Dodelson, S., Melchior, P., Sobreira, F., Upadhyay, V., Weller, J., Abbott, T., Abdalla, F. B., Allam, S., Armstrong, R., Banerji, M., Bauer, A. H., Bayliss, M., Benoit-Levy, A., Bernstein, G. M., Bertin, E., Brodwin, M., Brooks, D., Buckley-Geer, E., Burke, D. L., Carlstrom, J. E., Capasso, R., Capozzi, D., Carnero Rosell, A., Carrasco Kind, M., Chiu, I., Covarrubias, R., Crawford, T. M., Crocce, M., D'Andrea, C. B., da Costa, L. N., De; Poy, D. L., Desai, S., de Haan, T., Diehl, H. T., Dietrich, J. P., Doel, P., Cunha, C. E., Eifler, T. F., Evrard, A. E., Fausti Neto, A., Fernandez, E., Flaugher, B., Fosalba, P., Frieman, J., Gangkofner, C., Gaztanaga, E., Gerdes, D., Gruen, D., Gruendl, R. A., Gupta, N., Hennig, C., Holzapfel, W. L., Honscheid, K., Jain, B., James, D., Kuehn, K., Kuropatkin, N., Lahav, O., Li, T. S., Lin, H., Maia, M. A. G., March, M., Marshall, J. L., Martini, P., McDonald, M., Miller, C. J., Miquel, R., Nord, B., Ogando, R., Plazas, A. A., Reichardt, C. L., Romer, A. K., Roodman, A., Sako, M., Sanchez, E., Schubnell, M., Sevilla, I., Smith, R. C., Stalder, B., Stark, A. A., Strazzullo, V., Suchyta, E., Swanson, M. E. C., Tarle, G., Thaler, J., Thomas, D., Tucker, D., Vikram, V., von der Linden, A., Walker, A. R., Wechsler, R. H., Wester, W., Zenteno, A., Ziegler, K. E.
    Oxford University Press
    Details
    Publication Date: 2015-10-14
    Description: We cross-match galaxy cluster candidates selected via their Sunyaev–Zel'dovich effect (SZE) signatures in 129.1 deg 2 of the South Pole Telescope 2500d SPT-SZ survey with optically identified clusters selected from the Dark Energy Survey science verification data. We identify 25 clusters between 0.1 z 0.8 in the union of the SPT-SZ and redMaPPer (RM) samples. RM is an optical cluster finding algorithm that also returns a richness estimate for each cluster. We model the richness -mass relation with the following function 〈ln | M 500 〉 B ln M 500 + C ln E ( z ) and use SPT-SZ cluster masses and RM richnesses to constrain the parameters. We find $B_\lambda = 1.14^{+0.21}_{-0.18}$ and $C_\lambda =0.73^{+0.77}_{-0.75}$ . The associated scatter in mass at fixed richness is $\sigma _{\ln M|\lambda } = 0.18^{+0.08}_{-0.05}$ at a characteristic richness = 70. We demonstrate that our model provides an adequate description of the matched sample, showing that the fraction of SPT-SZ-selected clusters with RM counterparts is consistent with expectations and that the fraction of RM-selected clusters with SPT-SZ counterparts is in mild tension with expectation. We model the optical-SZE cluster positional offset distribution with the sum of two Gaussians, showing that it is consistent with a dominant, centrally peaked population and a subdominant population characterized by larger offsets. We also cross-match the RM catalogue with SPT-SZ candidates below the official catalogue threshold significance = 4.5, using the RM catalogue to provide optical confirmation and redshifts for 15 additional clusters with [4, 4.5].
    Print ISSN: 0035-8711
    Electronic ISSN: 1365-2966
    Topics: Physics
    Published by Oxford University Press
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  • 5
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    Mollack: a web server for the automated creation of conformational ensembles for intrinsically disordered proteins (2016)
    Oxford University Press
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    Publication Date: 2016-08-11
    Description: : Intrinsically disordered proteins (IDPs) play central roles in many biological processes. Consequently, an accurate description of the disordered state is an important step towards a comprehensive understanding of a number of important biological functions. In this work we describe a new web server, Mollack, for the automated construction of unfolded ensembles that uses both experimental and molecular simulation data to construct models for the unfolded state. An important aspect of the method is that it calculates a quantitative estimate of the uncertainty in the constructed ensemble, thereby providing an objective measure of the quality of the final model. Overall, Mollack facilitates structure-function studies of disordered proteins. Availability and Implementation: http://cmstultz-mollack.mit.edu Contact: cmstultz@mit.edu Supplementary information: Supplementary data are available at Bioinformatics online.
    Print ISSN: 1367-4803
    Electronic ISSN: 1460-2059
    Topics: Biology , Computer Science , Medicine
    Published by Oxford University Press
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  • 6
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    Star formation properties of Hickson Compact Groups based on deep H{alpha} imaging (2015)
    Oxford University Press
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    Publication Date: 2015-06-18
    Description: We present deep Hα imaging of seven Hickson Compact Groups (HCGs) using the 4.1-m Southern Astrophysics Research (SOAR) Telescope. The high spatial resolution of the observations allows us to study both the integrated star formation properties of the main galaxies as well as the 2D distribution of star-forming knots in the faint tidal arms that form during interactions between the individual galaxies. We derive star formation rates and stellar masses for group members and discuss their position relative to the main sequence of star-forming galaxies. Despite the existence of tidal features within the galaxy groups, we do not find any indication for enhanced star formation in the selected sample of HCGs. We study azimuthally averaged Hα profiles of the galaxy discs and compare them with the g ' and r ' surface brightness profiles. We do not find any truncated galaxy discs but reveal that more massive galaxies show a higher light concentration in Hα than less massive ones. We also see that galaxies that show a high light concentration in r ', show a systematic higher light concentration in Hα. Tidal dwarf galaxy (TDG) candidates have been previously detected in R -band images for two groups in our sample but we find that most of them are likely background objects as they do not show any emission in Hα. We present a new TDG candidate at the tip of the tidal tail in HCG 91.
    Print ISSN: 0035-8711
    Electronic ISSN: 1365-2966
    Topics: Physics
    Published by Oxford University Press
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  • 7
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    Estimation of the gravimetric pole tide by stacking long time-series of GGP superconducting gravimeters (2016)
    Oxford University Press
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    Publication Date: 2016-02-20
    Description: We compute the gravimetric factor at the Chandler wobble (CW) frequency using time-series from superconducting gravimeters (SG) longer than a decade. We first individually process the polar motion and data at each individual gravity station to estimate the gravimetric factor amplitude and phase, then we make a global analysis by applying a stacking method to different subsets of up to seven SG stations. The stacking is an efficient way of getting rid of local effects and improving the signal-to-noise ratio of the combined data sets. Using the stacking method, we find a gravimetric factor amplitude and phase of 1.118 ± 0.016 and –0.45 ± 0.66 deg, respectively, which is smaller in amplitude than expected. The sources of error are then carefully considered. For both local and global analyses, the uncertainties on our results are reliably constrained by computing the standard deviation of the estimates of the gravimetric factor amplitude and phase for increasing length of the time-series. Constraints on the CW anelastic dissipation can be set since any departure of the gravimetric factor from its elastic value may provide some insights into the dissipative processes that occur at the CW period. In particular, assuming given rheological models for the Earth's mantle enables us to make the link between the gravimetric factor phase and the CW quality factor.
    Keywords: Gravity, Geodesy and Tides
    Print ISSN: 0956-540X
    Electronic ISSN: 1365-246X
    Topics: Geosciences
    Published by Oxford University Press on behalf of The Deutsche Geophysikalische Gesellschaft (DGG) and the Royal Astronomical Society (RAS).
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  • 8
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    PADM2M: a penalized maximum likelihood model of the 0–2 Ma palaeomagnetic axial dipole moment (2011)
    Oxford University Press
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    Publication Date: 2011-01-15
    Description: SUMMARY We present a new time-varying model for palaeomagnetic axial dipole moment (PADM) for the past 2 Myr and compare it with earlier virtual axial dipole moment (VADM) reconstructions which have been based on stacking and averaging scaled relative palaeointensity records. The PADM is derived from both absolute and relative palaeointensity data and constructed using a new penalized maximum likelihood (PML) approach to recover a cubic B-spline representation of axial-dipole field variations on million year timescales. The PML method is explicitly intended to reduce bias in estimating the true axial dipole moment that arises in average VADM reconstructions. We apply the PML method to a set of 96 032 published data (1800 palaeointensities from igneous rocks, 3300 archaeointensities and 86 relative palaeointensity time-series of variable lengths and resolutions). Two models are discussed: PADM2Mp is a trial model based on a subset of the nine longest available sedimentary records; PADM2M uses a comprehensive data set (76 records, 81 446 data; 10 records were eliminated) and is our preferred model. PADM2M has a lower mean than existing VADM reconstructions but shows similarities in long-period variability. Some differences in timing, amplitude and resolution of certain features can be attributed to variations in age assignments. Others result from our more comprehensive data set and a reduction in bias attributable to PML modelling. PADM2M has an average axial dipole moment over 0–2 Ma of 5.3 × 10 22  Am 2 with a standard deviation of 1.5 × 10 22  Am 2 . The Brunhes chron average ( 6.2 × 10 22  Am 2 ) is higher than for earlier epochs of Matuyama ( 4.8 × 10 22  Am 2 ), as seen in some previous studies. The power spectrum for our model agrees with previous estimates of the global palaeomagnetic power spectrum for frequencies up to about 10 2  Myr −1 . We see no distinctive evidence in the power spectrum for orbital forcing of geodynamo behaviour.
    Print ISSN: 0956-540X
    Electronic ISSN: 1365-246X
    Topics: Geosciences
    Published by Oxford University Press on behalf of The Deutsche Geophysikalische Gesellschaft (DGG) and the Royal Astronomical Society (RAS).
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  • 9
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    Reversibility of neuropathology in Tay-Sachs-related diseases (2014)
    Oxford University Press
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    Publication Date: 2014-01-11
    Description: The GM2 gangliosidoses are progressive neurodegenerative disorders due to defects in the lysosomal β- N -acetylhexosaminidase system. Accumulation of β-hexosaminidases A and B substrates is presumed to cause this fatal condition. An authentic mouse model of Sandhoff disease (SD) with pathological characteristics resembling those noted in infantile GM2 gangliosidosis has been described. We have shown that expression of β-hexosaminidase by intracranial delivery of recombinant adeno-associated viral vectors to young adult SD mice can prevent many features of the disease and extends lifespan. To investigate the nature of the neurological injury in GM2 gangliosidosis and the extent of its reversibility, we have examined the evolution of disease in the SD mouse; we have moreover explored the effects of gene transfer delivered at key times during the course of the illness. Here we report greatly increased survival only when the therapeutic genes are expressed either before the disease is apparent or during its early manifestations. However, irrespective of when treatment was administered, widespread and abundant expression of β-hexosaminidase with consequent clearance of glycoconjugates, α-synuclein and ubiquitinated proteins, and abrogation of inflammatory responses and neuronal loss was observed. We also show that defects in myelination occur in early life and cannot be easily resolved when treatment is given to the adult brain. These results indicate that there is a limited temporal opportunity in which function and survival can be improved—but regardless of resolution of the cardinal pathological features of GM2 gangliosidosis, a point is reached when functional deterioration and death cannot be prevented.
    Print ISSN: 0964-6906
    Electronic ISSN: 1460-2083
    Topics: Biology , Medicine
    Published by Oxford University Press
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  • 10
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    Strain rate tensor in Iran from a new GPS velocity field (2014)
    Oxford University Press
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    Publication Date: 2014-03-21
    Description: The aim of this paper is to determine the strain rate tensor (SRT) for the Iranian region. In this study, (1) we apply a method of computation of the SRT never used for the Iranian area and (2) we use a new GPS velocity field obtained from several previously published velocity fields. First, the method is described and tested on a synthetic case, which mimics the real Iranian case. The synthetic tests confirm that the method allows us to both retrieve high gradients of the strain rate field and reduce the effect of an erroneous velocity vector. Second, the method is applied to a real data set covering the Arabia-Eurasia collision zone in Iran. We particularly focus on the Zagros–Makran transition zone, the Central Iran region and the northernmost part of the Arabia-Eurasia collision zone (NW Iran–Caucasus–East Turkey). Whereas the main characteristics of the obtained SRT are consistent with known tectonic features, important new results are found in the Central Iran, with the strike-slip style along the Anar and Deshir faults, and the Zagros–Makran transition zone, with a north–south variation of the SRT along the Zendan–Minab–Palami fault system. We link these results to recent active tectonic studies.
    Print ISSN: 0956-540X
    Electronic ISSN: 1365-246X
    Topics: Geosciences
    Published by Oxford University Press on behalf of The Deutsche Geophysikalische Gesellschaft (DGG) and the Royal Astronomical Society (RAS).
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