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  • 1
    Publication Date: 2022-10-26
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Zeiner, C. A., Purvine, S. O., Zink, E., Wu, S., Pasa-Tolic, L., Chaput, D. L., Santelli, C. M., & Hansel, C. M. Mechanisms of manganese(II) oxidation by filamentous ascomycete fungi vary with species and time as a function of secretome composition. Frontiers in Microbiology, 12, (2021): 610497, https://doi.org/10.3389/fmicb.2021.610497.
    Description: Manganese (Mn) oxides are among the strongest oxidants and sorbents in the environment, and Mn(II) oxidation to Mn(III/IV) (hydr)oxides includes both abiotic and microbially-mediated processes. While white-rot Basidiomycete fungi oxidize Mn(II) using laccases and manganese peroxidases in association with lignocellulose degradation, the mechanisms by which filamentous Ascomycete fungi oxidize Mn(II) and a physiological role for Mn(II) oxidation in these organisms remain poorly understood. Here we use a combination of chemical and in-gel assays and bulk mass spectrometry to demonstrate secretome-based Mn(II) oxidation in three phylogenetically diverse Ascomycetes that is mechanistically distinct from hyphal-associated Mn(II) oxidation on solid substrates. We show that Mn(II) oxidative capacity of these fungi is dictated by species-specific secreted enzymes and varies with secretome age, and we reveal the presence of both Cu-based and FAD-based Mn(II) oxidation mechanisms in all 3 species, demonstrating mechanistic redundancy. Specifically, we identify candidate Mn(II)-oxidizing enzymes as tyrosinase and glyoxal oxidase in Stagonospora sp. SRC1lsM3a, bilirubin oxidase in Stagonospora sp. and Paraconiothyrium sporulosum AP3s5-JAC2a, and GMC oxidoreductase in all 3 species, including Pyrenochaeta sp. DS3sAY3a. The diversity of the candidate Mn(II)-oxidizing enzymes identified in this study suggests that the ability of fungal secretomes to oxidize Mn(II) may be more widespread than previously thought.
    Description: This work was supported by the National Science Foundation, grant numbers EAR-1249489 and CBET-1336496, both awarded to CH, by a JGI-EMSL Collaborative Science Initiative grant (proposal number 48100) awarded to CH and CS, and by the University of St. Thomas. Personal support for CZ was also provided by Harvard University and by a Ford Foundation Predoctoral Fellowship administered by the National Academies. A portion of this research was performed under the Facilities Integrating Collaborations for User Science (FICUS) program and used resources at the DOE Joint Genome Institute and the Environmental Molecular Sciences Laboratory (grid.436923.9), which are DOE Office of Science User Facilities. Both facilities are sponsored by the Biological and Environmental Research Program and operated under Contract Nos. DE-AC02-05CH11231 (JGI) and DE-AC05-76RL01830 (EMSL). Part of this research was performed at the Bauer Core Facility of the FAS Center for Systems Biology at Harvard University. A portion of the bioinformatics analysis was performed at Harvard’s FAS Research Computing facility.
    Keywords: Manganese oxides ; Filamentous fungi ; Geomicrobiology ; Proteomics ; Biomineralization ; Secretome
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 2
    Publication Date: 2016-07-22
    Description: Author(s): A. Hojem, D. Wesenberg, and B. L. Zink In a wide range of experiments where electrical currents are used to inject angular momentum, or spin currents, from a metallic ferromagnet into a nonmagnetic metal, the interface plays a critical role. Whether in the giant magnetoresistance effect or in nonlocal spin valves, a loss of spin polarization of an electrical current crossing the interface is seen to reduce the spin current and lead to smaller overall response in sensors. The authors here compare electrical spin injection to the more recently discovered thermal spin injection in a nonlocal spin valve. They show that, despite a strong reduction of electrical spin injection that they tie to the loss of interfacial spin polarization, thermal spin injection remains a large effect. This highlights that thermal spin injection (also called the spin-dependent Seebeck effect) can proceed by new physical mechanisms not possible in the electrically driven case, potentially involving incoherent spin pumping and collective behavior of magnetization in the oxidized interface layer. Better understanding of these interface effects could lead to new ways to increase sensitivity of next-generation magnetic sensors and efficiency of sources of spin current in metallic systems. [Phys. Rev. B 94, 024426] Published Thu Jul 21, 2016
    Keywords: Magnetism
    Print ISSN: 1098-0121
    Electronic ISSN: 1095-3795
    Topics: Physics
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  • 3
    Publication Date: 2016-05-04
    Description: Author(s): B. L. Zink, M. Manno, L. O'Brien, J. Lotze, M. Weiler, D. Bassett, S. J. Mason, S. T. B. Goennenwein, M. Johnson, and C. Leighton We present measurements of spin pumping detected by the inverse spin Hall effect voltage and ferromagnetic resonance spectroscopy in a series of metallic ferromagnet/normal metal thin film stacks. We compare heterostructures grown in situ to those where either a magnetic or nonmagnetic oxide is intr… [Phys. Rev. B 93, 184401] Published Mon May 02, 2016
    Keywords: Magnetism
    Print ISSN: 1098-0121
    Electronic ISSN: 1095-3795
    Topics: Physics
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  • 4
    Publication Date: 2013-09-18
    Description: Author(s): A. D. Avery and B. L. Zink We present direct measurements of the Peltier effect as a function of temperature from 77 to 325 K in Ni, Ni 80 Fe 20 , and Fe thin films made using a suspended Si-N membrane structure. Measurement of the Seebeck effect in the same films allows us to directly test predictions of Onsager reciprocity betw... [Phys. Rev. Lett. 111, 126602] Published Tue Sep 17, 2013
    Keywords: Condensed Matter: Electronic Properties, etc.
    Print ISSN: 0031-9007
    Electronic ISSN: 1079-7114
    Topics: Physics
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  • 5
    Publication Date: 2011-09-03
    Description: Author(s): E. Gaertig, K. Glampedakis, K. D. Kokkotas, and B. Zink We present the first calculation of the basic properties of the f -mode instability in rapidly rotating relativistic neutron stars, adopting the Cowling approximation. By accounting for dissipation in neutron star matter, i.e., shear or bulk viscosity and superfluid mutual friction, we calculate the ... [Phys. Rev. Lett. 107, 101102] Published Fri Sep 02, 2011
    Keywords: Gravitation and Astrophysics
    Print ISSN: 0031-9007
    Electronic ISSN: 1079-7114
    Topics: Physics
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  • 6
    Publication Date: 2012-11-09
    Description: Author(s): A. D. Avery, M. R. Pufall, and B. L. Zink We present magnetic-field-dependent measurements of thermopower, α (H), and resistance, R ( H ), for Ni 80 Fe 20 and Ni thin films. We conducted these experiments in fields oriented parallel and perpendicular to the applied thermal gradient, ∇ ⃗ T , for α (H) and applied current for R ( H ). We deposited the 20-n... [Phys. Rev. B 86, 184408] Published Thu Nov 08, 2012
    Keywords: Magnetism
    Print ISSN: 1098-0121
    Electronic ISSN: 1095-3795
    Topics: Physics
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  • 7
    Publication Date: 2015-12-10
    Description: Author(s): A. D. Avery, S. J. Mason, D. Bassett, D. Wesenberg, and B. L. Zink We present measurements of thermal and electrical conductivity of polycrystalline permalloy (Ni-Fe), aluminum, copper, cobalt, and nickel thin films with thickness 〈 200  nm. A micromachined silicon-nitride membrane thermal-isolation platform allows measurements of both transport properties on a si… [Phys. Rev. B 92, 214410] Published Tue Dec 08, 2015
    Keywords: Magnetism
    Print ISSN: 1098-0121
    Electronic ISSN: 1095-3795
    Topics: Physics
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  • 8
    Publication Date: 2012-09-15
    Description: Author(s): Christian Kappel, Nicole Dölker, Rajendra Kumar, Mareike Zink, Ulrich Zachariae, and Helmut Grubmüller Experimental and computational dynamic force spectroscopy is widely used to determine the mechanical properties of single biomolecules. Whereas so far the focus has mainly been on rupture or unfolding forces, recent force-probe molecular dynamics simulations have revealed a strong loading rate depen... [Phys. Rev. Lett. 109, 118304] Published Fri Sep 14, 2012
    Keywords: Soft Matter, Biological, and Interdisciplinary Physics
    Print ISSN: 0031-9007
    Electronic ISSN: 1079-7114
    Topics: Physics
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  • 9
    Publication Date: 2011-03-04
    Description: Author(s): A. D. Avery, Rubina Sultan, D. Bassett, D. Wei, and B. L. Zink We present measurements of thermopower (Seebeck coefficient) and electrical resistivity of a wide selection of polycrystalline ferromagnetic films with thicknesses ranging from 60–167 nm. For comparison, a copper film of similar thickness was measured with the same techniques. Both the thermal and... [Phys. Rev. B 83, 100401] Published Thu Mar 03, 2011
    Keywords: Magnetism
    Print ISSN: 1098-0121
    Electronic ISSN: 1095-3795
    Topics: Physics
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  • 10
    Publication Date: 2011-02-19
    Description: Author(s): Oleg Korobkin, Ernazar B. Abdikamalov, Erik Schnetter, Nikolaos Stergioulas, and Burkhard Zink Self-gravitating relativistic disks around black holes can form as transient structures in a number of astrophysical scenarios such as binary neutron star and black hole-neutron star coalescences, as well as the core collapse of massive stars. We explore the stability of such disks against runaway a... [Phys. Rev. D 83, 043007] Published Fri Feb 18, 2011
    Keywords: D15
    Print ISSN: 0556-2821
    Electronic ISSN: 1089-4918
    Topics: Physics
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