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  • 1
    Publication Date: 2022-12-22
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Scully, M. E., Geyer, W. R., Borkman, D., Pugh, T. L., Costa, A., & Nichols, O. C. Unprecedented summer hypoxia in southern Cape Cod Bay: an ecological response to regional climate change? Biogeosciences, 19(14), (2022): 3523–3536, https://doi.org/10.5194/bg-19-3523-2022.
    Description: In late summer 2019 and 2020 bottom waters in southern Cape Cod Bay (CCB) became depleted of dissolved oxygen (DO), with documented benthic mortality in both years. Hypoxic conditions formed in relatively shallow water where the strong seasonal thermocline intersected the sea floor, both limiting vertical mixing and concentrating biological oxygen demand (BOD) over a very thin bottom boundary layer. In both 2019 and 2020, anomalously high sub-surface phytoplankton blooms were observed, and the biomass from these blooms provided the fuel to deplete sub-pycnocline waters of DO. The increased chlorophyll fluorescence was accompanied by a corresponding decrease in sub-pycnocline nutrients, suggesting that prior to 2019 physical conditions were unfavorable for the utilization of these deep nutrients by the late-summer phytoplankton community. It is hypothesized that significant alteration of physical conditions in CCB during late summer, which is the result of regional climate change, has favored the recent increase in sub-surface phytoplankton production. These changes include rapidly warming waters and significant shifts in summer wind direction, both of which impact the intensity and vertical distribution of thermal stratification and vertical mixing within the water column. These changes in water column structure are not only more susceptible to hypoxia but also have significant implications for phytoplankton dynamics, potentially allowing for intense late-summer blooms of Karenia mikimotoi, a species new to the area. K. mikimotoi had not been detected in CCB or adjacent waters prior to 2017; however, increasing cell densities have been reported in subsequent years, consistent with a rapidly changing ecosystem.
    Description: This research has been supported by the National Science Foundation (grant no. OCE-2053240) and the National Oceanic and Atmospheric Administration (grant no. NA20OAR4170506).
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 2
    Publication Date: 2022-10-19
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Effects of density-driven flows on the long-term morphodynamic evolution of funnel-shaped estuaries. Journal of Geophysical Research: Earth Surface, 123, (2018): 2901–2924, doi:10.1029/2017JF004527.
    Description: Subtidal flows driven by density gradients affect the tide‐averaged sediment transport in estuaries and, therefore, can influence their long‐term morphodynamic evolution. The three‐dimensional Coupled Ocean‐Atmosphere‐Wave‐Sediment Transport modeling system is applied to numerically analyze the effects of baroclinicity and Earth's rotation on the long‐term morphodynamic evolution of idealized funnel‐shaped estuaries. The morphodynamic evolution in all the analyzed cases reproduced structures identified in many tide‐dominated estuaries: a meandering region in the fluvial‐tidal transition zone, a tidal maximum area close to the head, and a turbidity maxima region in the brackish zone. As the morphology of the estuaries evolved, the tidal propagation (including its asymmetry), the salinity gradient, and the strength of subtidal flows changed, which reflects the strong bathymetric control of these systems. The comparison with barotropic simulations showed that the three‐dimensional structure of the flow (induced by density gradients) has leading order effects on the morphodynamic evolution. Density gradient‐driven subtidal flows (1) promote near‐bed flood dominance and, consequently, the import of sediment into the estuary, (2) accelerate the morphodynamic evolution of the upper/middle estuary, (3) promote a more concave shape of the upper estuary and reduce the ebb‐tidal delta volume, and (4) produce an asymmetric bathymetry and inhibit the formation of alternate bars that would form under barotropic conditions. This latter effect is the consequence of the combined effect of Earth's rotation and baroclinicity.
    Description: We are grateful to all the developers of the COAWST, ROMS, and CSTMS modeling systems. M. O. acknowledges support from NSF project OCE‐1554892. W. R. G. acknowledges support from NFS project OCE‐1634480. C. T. F. acknowledges support from NSF project OCE‐1459708. Z. C. acknowledges the University of Florida for supporting his PhD, through a Graduate Fellow Scholarship. COAWST is an open source code and can be downloaded as explained in the following website: https://woodshole.er.usgs.gov/operations/modeling/COAWST. Model results and scripts to create the figures are accessible in the Figshare repository (DOI: 10.6084/m9.figshare.5975164).
    Description: 2019-04-13
    Keywords: Estuarine morphodynamic evolution ; Density gradient‐driven flows ; Long‐term morphodynamics ; COAWST model
    Repository Name: Woods Hole Open Access Server
    Type: Article
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